- Transcript 'Cisavi.CG.ENS81.R77....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R77.2730723-2748290.12987.t
Possible name(s)
CELF3; CELF4; CELF5
Gene model
Location
R77 [2,730,821 / 2,746,135]
Amino acid sequence
Length: 549
>Cisavi.CG.ENS81.R77.2730723-2748290.12987.p
MAMTVHGNQYLQHALPPVMSSTVPMAVHSESSYGGHGYLYPHVPLIPANCGSNIDRMHPF
KEAPEKDDDAVKLFIGQVPKNWDEKELRQIFAPFGEIFELSVLRDKYTGMHKGCAFLTYA
HKTAAMNAQNSLHERKTLPGMNHPIQVKPADTVSKGGKDDRKLFVGMLGKRQNEEDVRVL
FEPFGTIEECTILRTPEGQSKGCAFVKLACHSEAKTAMDALHGSQTMPGASSSLVVKFAD
TDKERAVRRMQQMAQTLNKLKLTKLSLTKLRITKLSLTKLRLTKLRLTKLRLTKLRLTKL
RLTKLRLTKPRLTKLSLTELSLTKPRLPTHRTLSQRPQVGTRSPPNQPRSTDSRKPLPSS
RSLLVMIHHQHATPVNGIPSTPQSPVAPAITTLNLLPPPSSATASTPEGSVELTQAYAQP
QPYTADFCLNLRFMLLGPEGCNLFIYHLPQEFSDADLANVFQPFGNVISAKVFIDRATNQ
SKCFGKICFCAIFVQPLALSVYSCVGIRFVSFDNAISSQAAIQTMNGFQIGMKRLKVQLK
RPKEQSRPY
Nucleotide sequence
Length: 1,670
>Cisavi.CG.ENS81.R77.2730723-2748290.12987.t
TTTATAAAGCAACAAAAGATATGGCGATGACTGTCCATGGAAATCAATACCTGCAACACG
CTTTGCCTCCAGTTATGAGCAGCACTGTTCCAATGGCAGTCCATTCTGAATCGTCGTACG
GCGGCCACGGTTATCTCTACCCACATGTGCCCCTTATTCCGGCGAACTGCGGAAGCAATA
TTGACAGAATGCATCCCTTCAAAGAAGCCCCAGAAAAAGACGACGACGCAGTAAAACTTT
TCATCGGCCAAGTCCCGAAAAACTGGGACGAAAAAGAGCTTCGTCAGATTTTCGCGCCAT
TTGGAGAGATTTTCGAGTTATCAGTCCTAAGGGATAAATACACAGGCATGCATAAAGGCT
GTGCCTTCCTCACCTACGCACACAAAACAGCAGCAATGAACGCGCAGAACAGTCTCCACG
AACGAAAAACGCTTCCTGGGATGAACCACCCAATCCAAGTCAAGCCAGCCGATACCGTTA
GTAAAGGAGGTAAGGATGACCGCAAGTTATTCGTTGGGATGTTGGGGAAACGACAAAACG
AGGAGGATGTTCGCGTTCTCTTTGAACCGTTCGGAACGATTGAAGAATGCACGATTTTAA
GAACGCCTGAGGGGCAGAGCAAAGGATGCGCATTCGTGAAGCTCGCCTGTCATTCGGAAG
CTAAGACTGCGATGGACGCTCTGCACGGGAGTCAGACCATGCCGGGGGCGTCCTCGAGCC
TGGTTGTAAAGTTCGCGGACACGGACAAAGAGCGCGCCGTGCGACGAATGCAGCAAATGG
CGCAAACCTTAAATAAACTTAAATTAACTAAGCTAAGCTTAACTAAACTACGGATAACTA
AGCTAAGCTTAACCAAACTACGATTAACTAAACTACGATTAACTAAACTACGATTAACTA
AACTACGATTAACTAAACTAAGATTAACTAAACTAAGATTAACTAAACCACGATTAACTA
AGCTAAGCTTAACTGAGCTAAGCTTAACTAAACCACGATTACCTACCCACAGAACGTTGT
CCCAGCGACCCCAGGTTGGAACTCGCTCTCCCCCCAACCAACCACGATCAACGGACTCGC
GCAAGCCGCTACCGTCATCCCGCAGCCTGCTGGTGATGATCCACCACCAGCATGCCACCC
CTGTGAACGGCATCCCCAGCACCCCTCAGAGCCCAGTGGCCCCAGCTATCACCACCCTCA
ACCTGCTACCCCCGCCCTCCAGCGCTACAGCCTCCACCCCTGAGGGTTCCGTTGAGCTGA
CGCAAGCCTACGCACAACCTCAACCCTACACAGCTGATTTCTGTCTAAACCTTCGTTTTA
TGCTCCTAGGCCCGGAAGGCTGTAATTTGTTCATCTACCATCTACCGCAAGAATTCTCTG
ACGCCGACCTTGCCAATGTGTTCCAGCCGTTCGGAAACGTCATTTCCGCCAAGGTTTTTA
TCGACCGAGCGACCAATCAGAGCAAGTGTTTCGGTAAAATCTGTTTTTGTGCGATTTTTG
TACAACCCCTAGCCTTGTCTGTATATTCGTGCGTTGGAATCCGTTTTGTGAGTTTCGACA
ACGCTATCAGCTCCCAAGCCGCAATACAAACGATGAATGGCTTTCAAATCGGCATGAAGC
GTCTGAAAGTTCAGCTAAAACGGCCCAAGGAACAGAGCCGGCCGTATTAA
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[37-154] 1.61E-21 - T[159-251] 3.18E-30 - T[438-490] 3.18E-30 - T[506-547] 2.3E-6 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[59-155] 3.5E-25 - T[156-248] 1.6E-25 - T[436-547] 1.0E-20 |
| CDD |
CELF3/4/5/6_RRM1 (IPR034648) - T[66-152] 2.12875E-54 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[71-152] 15.153 - T[161-241] 15.34 - T[441-542] 13.328 |
| SMART |
RRM_dom (IPR000504) - T[72-148] 5.2E-20 - T[162-237] 1.8E-16 - T[442-538] 3.1E-9 |
| Pfam |
RRM_dom (IPR000504) - T[73-140] 5.3E-14 - T[163-225] 2.8E-13 - T[443-489] 2.3E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CELF5_HUMAN | 48.104 % | 407 | 8.18E-138 |
| CELF3_HUMAN | 44.828 % | 409 | 1.46E-138 |
| CELF4_HUMAN | 67.488 % | 296 | 2.77E-94 |