- Transcript 'KH2012:KH.L84.6.v1.R...' >
- Transcript 'KH2012:KH.L84.6.v2.A...' >
- Clone 'cien77370' >
- Transcript 'Cisavi.CG.ENS81.R77....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R77.2730723-2748290.12988.t
Possible name(s)
CELF3; CELF4; CELF5
Gene model
Location
R77 [2,732,906 / 2,748,290]
Amino acid sequence
Length: 480
>Cisavi.CG.ENS81.R77.2730723-2748290.12988.p
LNPSGSLLKISNLTEAPEKDDDAVKLFIGQVPKNWDEKELRQIFAPFGEIFELSVLRDKY
TGMHKGCAFLTYAHKTAAMNAQNSLHERKTLPGMNHPIQVKPADTVSKGGKDDRKLFVGM
LGKRQNEEDVRVLFEPFGTIEECTILRTPEGQSKGCAFVKLACHSEAKTAMDALHGSQTM
PGASSSLVVKFADTDKERAVRRMQQMAQTYGLINPVPLQIGTYSLPYTQLSLTKLRITKL
SLTKLRLTKLRLTKLRLTKLRLTKLRLTKLRLTKPRLTKLSLTELSLTKPRLPTHRTLSQ
RPQVGTRSPPNQPRSTDSRKPLPSSRSLLIPPFYGTSPRISNPLHPTVIHHQHATPVNGI
PSTPQSPVAPAITTLNLLPPPSSATASTPEGPEGCNLFIYHLPQEFSDADLANVFQPFGN
VISAKVFIDRATNQSKCFGFVSFDNAISSQAAIQTMNGFQIGMKRLKVQLKRPKEQSRPY
Nucleotide sequence
Length: 2,153
>Cisavi.CG.ENS81.R77.2730723-2748290.12988.t
TTAAATCCGTCTGGCTCGCTTTTAAAGATTTCTAATCTTACAGAAGCCCCAGAAAAAGAC
GACGACGCAGTAAAACTTTTCATCGGCCAAGTCCCGAAAAACTGGGACGAAAAAGAGCTT
CGTCAGATTTTCGCGCCATTTGGAGAGATTTTCGAGTTATCAGTCCTAAGGGATAAATAC
ACAGGCATGCATAAAGGCTGTGCCTTCCTCACCTACGCACACAAAACAGCAGCAATGAAC
GCGCAGAACAGTCTCCACGAACGAAAAACGCTTCCTGGGATGAACCACCCAATCCAAGTC
AAGCCAGCCGATACCGTTAGTAAAGGAGGTAAGGATGACCGCAAGTTATTCGTTGGGATG
TTGGGGAAACGACAAAACGAGGAGGATGTTCGCGTTCTCTTTGAACCGTTCGGAACGATT
GAAGAATGCACGATTTTAAGAACGCCTGAGGGGCAGAGCAAAGGATGCGCATTCGTGAAG
CTCGCCTGTCATTCGGAAGCTAAGACTGCGATGGACGCTCTGCACGGGAGTCAGACCATG
CCGGGGGCGTCCTCGAGCCTGGTTGTAAAGTTCGCGGACACGGACAAAGAGCGCGCCGTG
CGACGAATGCAGCAAATGGCGCAAACGTACGGACTGATCAATCCAGTTCCCCTCCAGATC
GGAACCTACAGCTTGCCGTATACGCAGCTAAGCTTAACTAAACTACGGATAACTAAGCTA
AGCTTAACCAAACTACGATTAACTAAACTACGATTAACTAAACTACGATTAACTAAACTA
CGATTAACTAAACTAAGATTAACTAAACTAAGATTAACTAAACCACGATTAACTAAGCTA
AGCTTAACTGAGCTAAGCTTAACTAAACCACGATTACCTACCCACAGAACGTTGTCCCAG
CGACCCCAGGTTGGAACTCGCTCTCCCCCCAACCAACCACGATCAACGGACTCGCGCAAG
CCGCTACCGTCATCCCGCAGCCTGCTGATACCCCCTTTTTACGGGACTTCCCCACGAATT
TCTAACCCCCTTCACCCTACAGTGATCCACCACCAGCATGCCACCCCTGTGAACGGCATC
CCCAGCACCCCTCAGAGCCCAGTGGCCCCAGCTATCACCACCCTCAACCTGCTACCCCCG
CCCTCCAGCGCTACAGCCTCCACCCCTGAGGGCCCGGAAGGCTGTAATTTGTTCATCTAC
CATCTACCGCAAGAATTCTCTGACGCCGACCTTGCCAATGTGTTCCAGCCGTTCGGAAAC
GTCATTTCCGCCAAGGTTTTTATCGACCGAGCGACCAATCAGAGCAAGTGTTTCGGTTTT
GTGAGTTTCGACAACGCTATCAGCTCCCAAGCCGCAATACAAACGATGAATGGCTTTCAA
ATCGGCATGAAGCGTCTGAAAGTTCAGCTAAAACGGCCCAAGGAACAGAGCCGGCCGTAT
TAACTTAAACATTCCGGGTATTTCAATGCACCGTGTACATATATCAATCATCCCTTCTTT
AGCGCCATCGTGCGAATGTGCAATTTATTTTATGACGCCGCGAGAGAGTGACGTTACACC
GACATACACACTTTTTTAGTTCAGTATTTTTCTCGCTTTTTCTTAGTTTCCCTACCGCGC
TACAACCCGAGACCCGGGTGGTAGAACCCGAGGTCCAGGTGTACAGAGATTCCATGTTTT
TATTCCTTTCGCCACCGCCTCCGTCTTCAATTCTTTCCCACGAGATTCCAATTATGACGT
CAACAGCGATGACGTCACACTGTGCAGTCAACTGTGATGAAGGCTCACTCAAAAGATTTT
TTACTCAACCGTACTACTTTATGCGCATATAGAGCATCCCCGTTTTTGGGACCAATTTTA
ATTTTCTTTGGCAGTTTTTAGCATTTTAACCTACTGACAGCTGCTCTTTCTACCTTTCCG
ACATTTTCAAAGCAAAGTTTTAAAAAATGAAATTTATTTTTCTATAACCTTATCCCGAGT
TATCACGCGGATAAGTGGTGCTGCTGACGTTTTTTTGCTGCTTATTTTCCTTTTATTGCG
TCATAGTTTTTGATTTATTTCGTCACAACGTTTATTTTTTGCTGACAACGGTGCTCCGGT
CAACGATCTGTACATAGGAGAGAGAATAAATTTGAGAGAAAATCGATTAATAA
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[11-108] 2.9E-25 - T[109-201] 1.2E-25 - T[381-478] 7.5E-27 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[16-106] 5.37E-21 - T[112-204] 2.39E-41 - T[392-476] 2.39E-41 |
| CDD |
CELF3/4/5/6_RRM1 (IPR034648) - T[19-105] 5.29697E-55 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[24-105] 15.153 - T[114-194] 15.34 - T[395-473] 16.739 |
| SMART |
RRM_dom (IPR000504) - T[25-101] 5.2E-20 - T[115-190] 1.8E-16 - T[396-469] 1.9E-22 |
| Pfam |
RRM_dom (IPR000504) - T[26-93] 4.3E-14 - T[116-178] 2.2E-13 - T[397-467] 1.6E-17 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CELF5_HUMAN | 50.317 % | 437 | 1.42E-150 |
| CELF3_HUMAN | 50.206 % | 437 | 1.29E-150 |
| CELF4_HUMAN | 46.862 % | 397 | 7.71E-135 |