- Transcript 'KH2012:KH.L84.6.v2.R...' >
- EST 'FK176752.1' >
- Transcript 'Cisavi.CG.ENS81.R77....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R77.2730723-2748290.12989.t
Possible name(s)
CELF3; CELF4; CELF5
Gene model
Location
R77 [2,732,942 / 2,748,164]
Amino acid sequence
Length: 474
>Cisavi.CG.ENS81.R77.2730723-2748290.12989.p
LTEAPEKDDDAVKLFIGQVPKNWDEKELRQIFAPFGEIFELSVLRDKYTGMHKGCAFLTY
AHKTAAMNAQNSLHERKTLPGMNHPIQVKPADTVSKGGKDDRKLFVGMLGKRQNEEDVRV
LFEPFGTIEECTILRTPEGQSKGCAFVKLACHSEAKTAMDALHGSQTMPGASSSLVVKFA
DTDKERAVRRMQQMAQTYGLINPNVVPATPGWNSLSPQPTTINGLAQAATIPPFYGTSPR
ISNPLHPTVIHHQHATPVNGIPSTPQSPVAPAITTLNLLPPPSSATASTPEADASLRTTS
TLHRYLNLVVLSVYLLHVVSISFFLNSFLCHIKSFLSGFIVCHLTTFSFFTLSYLYPIEP
HIIPTHIPLFIISDFCLNLRFMLLGPEGCNLFIYHLPQEFSDADLANVFQPFGNVISAKV
FIDRATNQSKCFGFVSFDNAISSQAAIQTMNGFQIGMKRLKVQLKRPKEQSRPY
Nucleotide sequence
Length: 2,009
>Cisavi.CG.ENS81.R77.2730723-2748290.12989.t
CTTACAGAAGCCCCAGAAAAAGACGACGACGCAGTAAAACTTTTCATCGGCCAAGTCCCG
AAAAACTGGGACGAAAAAGAGCTTCGTCAGATTTTCGCGCCATTTGGAGAGATTTTCGAG
TTATCAGTCCTAAGGGATAAATACACAGGCATGCATAAAGGCTGTGCCTTCCTCACCTAC
GCACACAAAACAGCAGCAATGAACGCGCAGAACAGTCTCCACGAACGAAAAACGCTTCCT
GGGATGAACCACCCAATCCAAGTCAAGCCAGCCGATACCGTTAGTAAAGGAGGTAAGGAT
GACCGCAAGTTATTCGTTGGGATGTTGGGGAAACGACAAAACGAGGAGGATGTTCGCGTT
CTCTTTGAACCGTTCGGAACGATTGAAGAATGCACGATTTTAAGAACGCCTGAGGGGCAG
AGCAAAGGATGCGCATTCGTGAAGCTCGCCTGTCATTCGGAAGCTAAGACTGCGATGGAC
GCTCTGCACGGGAGTCAGACCATGCCGGGGGCGTCCTCGAGCCTGGTTGTAAAGTTCGCG
GACACGGACAAAGAGCGCGCCGTGCGACGAATGCAGCAAATGGCGCAAACGTACGGACTG
ATCAATCCAAACGTTGTCCCAGCGACCCCAGGTTGGAACTCGCTCTCCCCCCAACCAACC
ACGATCAACGGACTCGCGCAAGCCGCTACCATACCCCCTTTTTACGGGACTTCCCCACGA
ATTTCTAACCCCCTTCACCCTACAGTGATCCACCACCAGCATGCCACCCCTGTGAACGGC
ATCCCCAGCACCCCTCAGAGCCCAGTGGCCCCAGCTATCACCACCCTCAACCTGCTACCC
CCGCCCTCCAGCGCTACAGCCTCCACCCCTGAGGCTGACGCAAGCCTACGCACAACCTCA
ACCCTACACAGGTATTTAAACTTGGTGGTCCTTTCTGTGTATTTATTGCATGTTGTTTCA
ATTAGTTTTTTCCTTAACAGTTTTCTCTGTCATATAAAGTCTTTTTTATCCGGTTTTATT
GTTTGCCACTTAACCACTTTCTCGTTTTTCACCCTCTCATATTTGTACCCAATAGAACCC
CACATTATTCCCACCCATATCCCCCTTTTCATAATCTCTGATTTCTGTCTAAACCTTCGT
TTTATGCTCCTAGGCCCGGAAGGCTGTAATTTGTTCATCTACCATCTACCGCAAGAATTC
TCTGACGCCGACCTTGCCAATGTGTTCCAGCCGTTCGGAAACGTCATTTCCGCCAAGGTT
TTTATCGACCGAGCGACCAATCAGAGCAAGTGTTTCGGTTTTGTGAGTTTCGACAACGCT
ATCAGCTCCCAAGCCGCAATACAAACGATGAATGGCTTTCAAATCGGCATGAAGCGTCTG
AAAGTTCAGCTAAAACGGCCCAAGGAACAGAGCCGGCCGTATTAACTTAAACATTCCGGG
TATTTCAATGCACCGTGTACATATATCAATCATCCCTTCTTTAGCGCCATCGTGCGAATG
TGCAATTTATTTTATGACGCCGCGAGAGAGTGACGTTACACCGACATACACACTTTTTTA
GTTCAGTATTTTTCTCGCTTTTTCTTAGTTTCCCTACCGCGCTACAACCCGAGACCCGGG
TGGTAGAACCCGAGGTCCAGGTGTACAGAGATTCCATGTTTTTATTCCTTTCGCCACCGC
CTCCGTCTTCAATTCTTTCCCACGAGATTCCAATTATGACGTCAACAGCGATGACGTCAC
ACTGTGCAGTCAACTGTGATGAAGGCTCACTCAAAAGATTTTTTACTCAACCGTACTACT
TTATGCGCATATAGAGCATCCCCGTTTTTGGGACCAATTTTAATTTTCTTTGGCAGTTTT
TAGCATTTTAACCTACTGACAGCTGCTCTTTCTACCTTTCCGACATTTTCAAAGCAAAGT
TTTAAAAAATGAAATTTATTTTTCTATAACCTTATCCCGAGTTATCACGCGGATAAGTGG
TGCTGCTGACGTTTTTTTGCTGCTTATTT
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[2-96] 3.7E-25 - T[97-189] 1.2E-25 - T[384-472] 6.1E-26 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[5-94] 7.93E-21 - T[100-192] 2.39E-41 - T[386-470] 2.39E-41 |
| CDD |
CELF3/4/5/6_RRM1 (IPR034648) - T[7-93] 6.92782E-56 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[12-93] 15.153 - T[102-182] 15.34 - T[389-467] 16.739 |
| SMART |
RRM_dom (IPR000504) - T[13-89] 5.2E-20 - T[103-178] 1.8E-16 - T[390-463] 1.9E-22 |
| Pfam |
RRM_dom (IPR000504) - T[14-81] 4.3E-14 - T[104-166] 2.2E-13 - T[391-461] 1.6E-17 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CELF2_HUMAN | 41.633 % | 358 | 2.11E-119 |
| CELF5_HUMAN | 53.819 % | 298 | 2.99E-96 |
| CELF4_HUMAN | 66.825 % | 305 | 4.34E-99 |