- Transcript 'KH2012:KH.C8.476.v2....' >
- Transcript 'Cisavi.CG.ENS81.R77....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R77.2730723-2748290.12990.t
Possible name(s)
CELF3; CELF4; CELF5
Gene model
Location
R77 [2,732,948 / 2,748,235]
Amino acid sequence
Length: 412
>Cisavi.CG.ENS81.R77.2730723-2748290.12990.p
EAPEKDDDAVKLFIGQVPKNWDEKELRQIFAPFGEIFELSVLRDKYTGMHKGCAFLTYAH
KTAAMNAQNSLHERKTLPGMNHPIQVKPADTVSKGGCAFVKLACHSEAKTAMDALHGSQT
MPGASSSLVVKFADTDKERAVRRMQQMAQTYGLINPVPLQIGTYSLPYTQNVVPATPGWN
SLSPQPTTINGLAQAATVIPQPAGEFVIHHQHATPVNGIPSTPQSPVAPAITTLNLLPPP
SSATASTPEGVYPIQGYPAQSPQSVELTQAYAQPQPYTVPFSTHTSNSMYPFSIFALNRL
YIIFPTHIPPPLTSTTPLSLIFSPEGCNLFIYHLPQEFSDADLANVFQPFGNVISAKVFI
DRATNQSKCFGFVSFDNAISSQAAIQTMNGFQIGMKRLKVQLKRPKEQSRPY
Nucleotide sequence
Length: 1,894
>Cisavi.CG.ENS81.R77.2730723-2748290.12990.t
GAAGCCCCAGAAAAAGACGACGACGCAGTAAAACTTTTCATCGGCCAAGTCCCGAAAAAC
TGGGACGAAAAAGAGCTTCGTCAGATTTTCGCGCCATTTGGAGAGATTTTCGAGTTATCA
GTCCTAAGGGATAAATACACAGGCATGCATAAAGGCTGTGCCTTCCTCACCTACGCACAC
AAAACAGCAGCAATGAACGCGCAGAACAGTCTCCACGAACGAAAAACGCTTCCTGGGATG
AACCACCCAATCCAAGTCAAGCCAGCCGATACCGTTAGTAAAGGAGGATGCGCATTCGTG
AAGCTCGCCTGTCATTCGGAAGCTAAGACTGCGATGGACGCTCTGCACGGGAGTCAGACC
ATGCCGGGGGCGTCCTCGAGCCTGGTTGTAAAGTTCGCGGACACGGACAAAGAGCGCGCC
GTGCGACGAATGCAGCAAATGGCGCAAACGTACGGACTGATCAATCCAGTTCCCCTCCAG
ATCGGAACCTACAGCTTGCCGTATACGCAGAACGTTGTCCCAGCGACCCCAGGTTGGAAC
TCGCTCTCCCCCCAACCAACCACGATCAACGGACTCGCGCAAGCCGCTACCGTCATCCCG
CAGCCTGCTGGTGAGTTCGTGATCCACCACCAGCATGCCACCCCTGTGAACGGCATCCCC
AGCACCCCTCAGAGCCCAGTGGCCCCAGCTATCACCACCCTCAACCTGCTACCCCCGCCC
TCCAGCGCTACAGCCTCCACCCCTGAGGGTGTGTACCCCATTCAAGGTTACCCAGCGCAA
TCGCCCCAGTCCGTTGAGCTGACGCAAGCCTACGCACAACCTCAACCCTACACAGTCCCC
TTTTCCACCCACACTTCCAACTCTATGTACCCCTTTTCCATATTTGCACTAAATAGACTC
TATATTATTTTTCCCACCCATATCCCCCCTCCCCTGACATCCACCACTCCCCTTTCTCTT
ATTTTTAGCCCGGAAGGCTGTAATTTGTTCATCTACCATCTACCGCAAGAATTCTCTGAC
GCCGACCTTGCCAATGTGTTCCAGCCGTTCGGAAACGTCATTTCCGCCAAGGTTTTTATC
GACCGAGCGACCAATCAGAGCAAGTGTTTCGGTTTTGTGAGTTTCGACAACGCTATCAGC
TCCCAAGCCGCAATACAAACGATGAATGGCTTTCAAATCGGCATGAAGCGTCTGAAAGTT
CAGCTAAAACGGCCCAAGGAACAGAGCCGGCCGTATTAACTTAAACATTCCGGGTATTTC
AATGCACCGTGTACATATATCAATCATCCCTTCTTTAGCGCCATCGTGCGAATGTGCAAT
TTATTTTATGACGCCGCGAGAGAGTGACGTTACACCGACATACACACTTTTTTAGTTCAG
TATTTTTCTCGCTTTTTCTTAGTTTCCCTACCGCGCTACAACCCGAGACCCGGGTGGTAG
AACCCGAGGTCCAGGTGTACAGAGATTCCATGTTTTTATTCCTTTCGCCACCGCCTCCGT
CTTCAATTCTTTCCCACGAGATTCCAATTATGACGTCAACAGCGATGACGTCACACTGTG
CAGTCAACTGTGATGAAGGCTCACTCAAAAGATTTTTTACTCAACCGTACTACTTTATGC
GCATATAGAGCATCCCCGTTTTTGGGACCAATTTTAATTTTCTTTGGCAGTTTTTAGCAT
TTTAACCTACTGACAGCTGCTCTTTCTACCTTTCCGACATTTTCAAAGCAAAGTTTTAAA
AAATGAAATTTATTTTTCTATAACCTTATCCCGAGTTATCACGCGGATAAGTGGTGCTGC
TGACGTTTTTTTGCTGCTTATTTTCCTTTTATTGCGTCATAGTTTTTGATTTATTTCGTC
ACAACGTTTATTTTTTGCTGACAACGGTGCTCCG
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[1-92] 4.4E-25 - T[93-142] 3.5E-8 - T[322-410] 4.8E-26 |
| CDD |
CELF3/4/5/6_RRM1 (IPR034648) - T[5-91] 4.61278E-56 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[7-120] 1.25E-23 - T[96-145] 2.84E-27 - T[324-408] 2.84E-27 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[10-91] 15.153 - T[327-405] 16.739 |
| SMART |
RRM_dom (IPR000504) - T[11-87] 5.2E-20 - T[328-401] 1.9E-22 |
| Pfam |
RRM_dom (IPR000504) - T[12-79] 3.3E-14 - T[329-399] 1.3E-17 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CELF6_HUMAN | 44.658 % | 337 | 1.83E-112 |
| CELF5_HUMAN | 45.322 % | 357 | 7.02E-120 |
| CELF3_HUMAN | 45.114 % | 365 | 1.68E-123 |