- Clone 'citb013c17' >
- Transcript 'Cisavi.CG.ENS81.R77....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R77.2730723-2748290.12991.t
Possible name(s)
CELF3; CELF4; CELF5
Gene model
Location
R77 [2,732,954 / 2,746,135]
Amino acid sequence
Length: 487
>Cisavi.CG.ENS81.R77.2730723-2748290.12991.p
PEKDDDAVKLFIGQVPKNWDEKELRQIFAPFGEIFELSVLRDKYTGMHKGCAFLTYAHKT
AAMNAQNSLHERKTLPGMNHPIQVKPADTVSKGGKDDRKLFVGMLGKRQNEEDVRVLFEP
FGTIEECTILRTPEGQSKGCAFVKLACHSEAKTAMDALHGSQTMPGASSSLVVKFADTDK
ERAVRRMQQMAQTYGLINPVPLQIGTYSLPYTQLSLTKLRLTKLRLTKLRLTKLRLTKLR
LTKLRLTKPRLTKLSLTELSLTKPRLPTHRTLSQRPQVGTRSPPNQPRSTDSRKPLPSSR
SLLVSSVLIHHQHATPVNGIPSTPQSPVAPAITTLNLLPPPSSATASTPEGVFLCHIKSF
LSGFIVCHLTTFSFFTLSYLYPIEPHIIPTHIPLFIICPEGCNLFIYHLPQEFSDADLAN
VFQPFGNVISAKVFIDRATNQSKCFGFVSFDNAISSQAAIQTMNGFQIGMKRLKVQLKRP
KEQSRPY
Nucleotide sequence
Length: 1,464
>Cisavi.CG.ENS81.R77.2730723-2748290.12991.t
CCAGAAAAAGACGACGACGCAGTAAAACTTTTCATCGGCCAAGTCCCGAAAAACTGGGAC
GAAAAAGAGCTTCGTCAGATTTTCGCGCCATTTGGAGAGATTTTCGAGTTATCAGTCCTA
AGGGATAAATACACAGGCATGCATAAAGGCTGTGCCTTCCTCACCTACGCACACAAAACA
GCAGCAATGAACGCGCAGAACAGTCTCCACGAACGAAAAACGCTTCCTGGGATGAACCAC
CCAATCCAAGTCAAGCCAGCCGATACCGTTAGTAAAGGAGGTAAGGATGACCGCAAGTTA
TTCGTTGGGATGTTGGGGAAACGACAAAACGAGGAGGATGTTCGCGTTCTCTTTGAACCG
TTCGGAACGATTGAAGAATGCACGATTTTAAGAACGCCTGAGGGGCAGAGCAAAGGATGC
GCATTCGTGAAGCTCGCCTGTCATTCGGAAGCTAAGACTGCGATGGACGCTCTGCACGGG
AGTCAGACCATGCCGGGGGCGTCCTCGAGCCTGGTTGTAAAGTTCGCGGACACGGACAAA
GAGCGCGCCGTGCGACGAATGCAGCAAATGGCGCAAACGTACGGACTGATCAATCCAGTT
CCCCTCCAGATCGGAACCTACAGCTTGCCGTATACGCAGCTAAGCTTAACCAAACTACGA
TTAACTAAACTACGATTAACTAAACTACGATTAACTAAACTACGATTAACTAAACTAAGA
TTAACTAAACTAAGATTAACTAAACCACGATTAACTAAGCTAAGCTTAACTGAGCTAAGC
TTAACTAAACCACGATTACCTACCCACAGAACGTTGTCCCAGCGACCCCAGGTTGGAACT
CGCTCTCCCCCCAACCAACCACGATCAACGGACTCGCGCAAGCCGCTACCGTCATCCCGC
AGCCTGCTGGTGAGTTCGGTACTGATCCACCACCAGCATGCCACCCCTGTGAACGGCATC
CCCAGCACCCCTCAGAGCCCAGTGGCCCCAGCTATCACCACCCTCAACCTGCTACCCCCG
CCCTCCAGCGCTACAGCCTCCACCCCTGAGGGTGTTTTTCTCTGTCATATAAAGTCTTTT
TTATCCGGTTTTATTGTTTGCCACTTAACCACTTTCTCGTTTTTCACCCTCTCATATTTG
TACCCAATAGAACCCCACATTATTCCCACCCATATCCCCCTTTTCATAATCTGCCCGGAA
GGCTGTAATTTGTTCATCTACCATCTACCGCAAGAATTCTCTGACGCCGACCTTGCCAAT
GTGTTCCAGCCGTTCGGAAACGTCATTTCCGCCAAGGTTTTTATCGACCGAGCGACCAAT
CAGAGCAAGTGTTTCGGTTTTGTGAGTTTCGACAACGCTATCAGCTCCCAAGCCGCAATA
CAAACGATGAATGGCTTTCAAATCGGCATGAAGCGTCTGAAAGTTCAGCTAAAACGGCCC
AAGGAACAGAGCCGGCCGTATTAA
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[1-92] 9.9E-25 - T[93-185] 1.3E-25 - T[398-485] 1.0E-25 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[3-90] 1.34E-20 - T[96-188] 3.0E-41 - T[399-483] 3.0E-41 |
| CDD |
CELF3/4/5/6_RRM1 (IPR034648) - T[3-89] 1.29209E-54 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[8-89] 15.153 - T[98-178] 15.34 - T[402-480] 16.739 |
| SMART |
RRM_dom (IPR000504) - T[9-85] 5.2E-20 - T[99-174] 1.8E-16 - T[403-476] 1.9E-22 |
| Pfam |
RRM_dom (IPR000504) - T[10-77] 4.4E-14 - T[100-162] 2.2E-13 - T[404-474] 1.7E-17 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CELF5_HUMAN | 59.574 % | 291 | 3.73E-93 |
| CELF3_HUMAN | 64.929 % | 300 | 3.82E-97 |
| CELF4_HUMAN | 65.741 % | 308 | 1.0E-99 |