- Clone 'csef022p22' >
- Transcript 'Cisavi.CG.ENS81.R77....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R77.2730723-2748290.12992.t
Possible name(s)
CELF3; CELF4; CELF5
Gene model
Location
R77 [2,732,957 / 2,746,135]
Amino acid sequence
Length: 472
>Cisavi.CG.ENS81.R77.2730723-2748290.12992.p
EKDDDAVKLFIGQVPKNWDEKELRQIFAPFGEIFELSVLRDKYTGMHKGCAFLTYAHKTA
AMNAQNSLHERKTLPGMNHPIQVKPADTVSKGEDRKLFVGMLGKRQNEEDVRVLFEPFGT
IEECTILRTPEGQSKGCAFVKLACHSEAKTAMDALHGSQTMPGASSSLVVKFADTDKERA
VRRMQQMAQTYGLINPVPLQIGTYSLPYTQLSLTELSLTKPRLPTHRTLSQRPQVGTRSP
PNQPRSTDSRKPLPSSRSLLVSSIPPFYGTSPRISNPLHPTVIHHQHATPVNGIPSTPQS
PVAPAITTLNLLPPPSSATASTPEGVYPIQAQSPQSVELTQAYAQPQPYTGLNPTSLSLK
LKKHTRGYNSIATIFEFKTKKHRPEGCNLFIYHLPQEFSDADLANVFQPFGNVISAKVFI
DRATNQSKCFGFVSFDNAISSQAAIQTMNGFQIGMKRLKVQLKRPKEQSRPY
Nucleotide sequence
Length: 1,419
>Cisavi.CG.ENS81.R77.2730723-2748290.12992.t
GAAAAAGACGACGACGCAGTAAAACTTTTCATCGGCCAAGTCCCGAAAAACTGGGACGAA
AAAGAGCTTCGTCAGATTTTCGCGCCATTTGGAGAGATTTTCGAGTTATCAGTCCTAAGG
GATAAATACACAGGCATGCATAAAGGCTGTGCCTTCCTCACCTACGCACACAAAACAGCA
GCAATGAACGCGCAGAACAGTCTCCACGAACGAAAAACGCTTCCTGGGATGAACCACCCA
ATCCAAGTCAAGCCAGCCGATACCGTTAGTAAAGGAGAGGACCGCAAGTTATTCGTTGGG
ATGTTGGGGAAACGACAAAACGAGGAGGATGTTCGCGTTCTCTTTGAACCGTTCGGAACG
ATTGAAGAATGCACGATTTTAAGAACGCCTGAGGGGCAGAGCAAAGGATGCGCATTCGTG
AAGCTCGCCTGTCATTCGGAAGCTAAGACTGCGATGGACGCTCTGCACGGGAGTCAGACC
ATGCCGGGGGCGTCCTCGAGCCTGGTTGTAAAGTTCGCGGACACGGACAAAGAGCGCGCC
GTGCGACGAATGCAGCAAATGGCGCAAACGTACGGACTGATCAATCCAGTTCCCCTCCAG
ATCGGAACCTACAGCTTGCCGTATACGCAGCTAAGCTTAACTGAGCTAAGCTTAACTAAA
CCACGATTACCTACCCACAGAACGTTGTCCCAGCGACCCCAGGTTGGAACTCGCTCTCCC
CCCAACCAACCACGATCAACGGACTCGCGCAAGCCGCTACCGTCATCCCGCAGCCTGCTG
GTGAGTTCGATACCCCCTTTTTACGGGACTTCCCCACGAATTTCTAACCCCCTTCACCCT
ACAGTGATCCACCACCAGCATGCCACCCCTGTGAACGGCATCCCCAGCACCCCTCAGAGC
CCAGTGGCCCCAGCTATCACCACCCTCAACCTGCTACCCCCGCCCTCCAGCGCTACAGCC
TCCACCCCTGAGGGTGTGTACCCCATTCAAGCGCAATCGCCCCAGTCCGTTGAGCTGACG
CAAGCCTACGCACAACCTCAACCCTACACAGGTTTAAACCCAACGAGTTTAAGTTTAAAA
CTCAAAAAACACACCCGTGGGTATAATTCTATAGCTACCATTTTCGAGTTTAAAACAAAA
AAGCACCGCCCGGAAGGCTGTAATTTGTTCATCTACCATCTACCGCAAGAATTCTCTGAC
GCCGACCTTGCCAATGTGTTCCAGCCGTTCGGAAACGTCATTTCCGCCAAGGTTTTTATC
GACCGAGCGACCAATCAGAGCAAGTGTTTCGGTTTTGTGAGTTTCGACAACGCTATCAGC
TCCCAAGCCGCAATACAAACGATGAATGGCTTTCAAATCGGCATGAAGCGTCTGAAAGTT
CAGCTAAAACGGCCCAAGGAACAGAGCCGGCCGTATTAA
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[1-91] 1.5E-24 - T[92-182] 3.2E-25 - T[375-470] 1.4E-26 |
| CDD |
CELF3/4/5/6_RRM1 (IPR034648) - T[2-88] 5.11716E-55 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[3-88] 2.28E-20 - T[93-185] 3.96E-41 - T[384-468] 3.96E-41 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[7-88] 15.153 - T[95-175] 15.34 - T[387-465] 16.739 |
| SMART |
RRM_dom (IPR000504) - T[8-84] 5.2E-20 - T[96-171] 1.8E-16 - T[388-461] 1.9E-22 |
| Pfam |
RRM_dom (IPR000504) - T[9-76] 4.2E-14 - T[97-159] 2.1E-13 - T[389-459] 1.6E-17 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CELF6_HUMAN | 50.207 % | 425 | 8.74E-146 |
| CELF5_HUMAN | 49.091 % | 434 | 2.21E-149 |
| CELF3_HUMAN | 50.4 % | 461 | 4.04E-160 |