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- Transcript 'Cisavi.CG.ENS81.R77....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R77.2996926-3008818.14417.t
Possible name(s)
GATA2; GATA4; GATA6
Gene model
Location
R77 [2,996,925 / 3,006,685]
Amino acid sequence
Length: 421
>Cisavi.CG.ENS81.R77.2996926-3008818.14417.p
QAPTLNPMKSAYTSQNYSSNPQYPFGATSYSSHNPCDFTHNSGISQNSPSLPNSYSYPTG
LWNPSETPLNYPGVNYGVAMSPAFVHGGMQTYIQPRECVNCGAIATTAWRRDATGHYLCS
TCGVWRSGGHIRAPIKSKGKLATCRRQVCSNCSTTVTTLWRRSPDGNPVCNACGLYQKLH
GVPRPRTMKKDSIQTRKRKPKGQGKGKSQKQRKNSSADSGVSNDLEVEKQPSAGSGVPES
PQRFDYQAQSFASANDSALSSHTMLSASLLENSLVTSERNTASPFVESHPVIGVGSSPDS
GIGNPRANATTGSAGHGPEMRSSPESGDFSPMGHYEGESAEIYEKKQDTAAASYTGAFDA
TDGKYSGIRYGYPENQNFDPNGLAALYSAGSTGSGSRHLRQYHPYARYPSHRSPYVKPEV
M
Nucleotide sequence
Length: 1,266
>Cisavi.CG.ENS81.R77.2996926-3008818.14417.t
CAAGCCCCCACCCTTAACCCTATGAAGTCGGCGTACACTTCACAGAACTATTCGTCTAAC
CCACAATACCCCTTCGGTGCTACGTCATACTCCTCCCACAACCCCTGTGACTTCACCCAC
AATTCGGGGATTTCCCAGAACTCACCAAGCTTGCCCAACAGTTACTCCTACCCAACTGGG
TTATGGAACCCGTCGGAAACCCCCCTAAATTACCCAGGGGTGAACTATGGGGTTGCAATG
AGCCCGGCGTTCGTACATGGCGGTATGCAAACCTACATTCAACCTCGGGAATGTGTCAAC
TGTGGAGCCATAGCCACAACAGCATGGCGTCGAGACGCCACGGGGCATTATCTGTGCAGC
ACATGTGGCGTGTGGCGCAGCGGCGGCCATATTCGAGCCCCGATCAAATCGAAAGGAAAA
CTGGCTACCTGTCGAAGGCAAGTTTGCTCCAACTGCAGCACGACAGTCACAACCTTGTGG
CGACGAAGTCCAGACGGGAATCCGGTTTGCAACGCGTGCGGACTCTACCAGAAATTACAC
GGAGTGCCGCGTCCCCGTACAATGAAGAAGGACAGTATACAGACCCGAAAACGGAAGCCA
AAGGGTCAAGGCAAAGGGAAAAGCCAGAAACAACGGAAAAACTCCTCAGCAGACAGCGGG
GTGTCAAACGACCTCGAGGTCGAGAAGCAACCGTCGGCGGGAAGTGGAGTCCCCGAATCC
CCGCAGAGATTCGATTACCAGGCCCAGTCTTTCGCTTCAGCCAACGATAGCGCGCTATCC
AGCCACACAATGCTTTCTGCTTCGTTACTCGAGAACAGCCTTGTGACGTCCGAACGCAAT
ACTGCGTCGCCTTTCGTCGAATCGCACCCTGTGATCGGCGTTGGGAGTTCCCCGGACTCG
GGAATTGGCAACCCGCGCGCCAACGCCACGACCGGAAGCGCCGGGCACGGACCGGAAATG
AGGTCGTCGCCGGAGTCGGGCGACTTCAGCCCGATGGGTCACTACGAGGGCGAAAGCGCC
GAAATCTACGAAAAGAAGCAGGATACGGCGGCAGCAAGTTATACCGGCGCGTTCGACGCA
ACGGACGGCAAGTACAGCGGTATCCGGTACGGATATCCGGAAAACCAGAACTTTGACCCT
AACGGCCTAGCTGCTTTATACTCCGCCGGTTCCACTGGTTCCGGAAGTCGTCATCTCCGA
CAATACCACCCCTACGCTCGCTACCCCTCTCACAGATCACCCTACGTCAAACCGGAAGTC
ATGTGA
| SMART |
Znf_GATA (IPR000679) - T[92-142] 7.2E-6 - T[143-193] 1.1E-22 |
| ProSiteProfiles |
Znf_GATA (IPR000679) - T[92-145] 17.489 - T[149-196] 26.218 |
| Gene3D |
Znf_NHR/GATA (IPR013088) - T[93-140] 2.8E-12 - T[142-210] 6.7E-27 |
| Pfam |
Znf_GATA (IPR000679) - T[98-124] 1.7E-6 - T[149-182] 1.2E-15 |
| PRINTS |
Znf_GATA (IPR000679) - T[145-162] 1.1E-8 - T[163-180] 1.1E-8 |
| ProSitePatterns |
Znf_GATA (IPR000679) - T[149-173] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GATA6_HUMAN | 54.962 % | 152 | 1.17E-40 |
| GATA4_HUMAN | 60.345 % | 152 | 7.39E-42 |
| GATA2_HUMAN | 62.264 % | 140 | 4.08E-37 |