- Transcript 'KH2012:KH.L147.10.v1...' >
- Transcript 'KH2012:KH.C14.43.v1....' >
- Transcript 'Moocci.CG.ELv1_2.S64...' >
- Transcript 'KH2012:KH.C2.712.v1....' >
- Transcript 'Cisavi.CG.ENS81.R83....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R83.1042343-1043719.04762.t
Possible name(s)
RBM39; RBM41; RNPC3
Gene model
Location
R83 [1,042,342 / 1,043,719]
Amino acid sequence
Length: 411
>Cisavi.CG.ENS81.R83.1042343-1043719.04762.p
ILIKHLPAELTPHEKRELLRCFGAEDVRVMSRNGQLRDAAFATFPNHQQAKTAVNRLHQL
EVLGCVLSAEFARKAHQNQAVDAVEDINAEESKEMQEKDDSKTLKRCKHCQRLPPIAPHF
GVEYFTNPKLKYKYPEPDADILLNICGAMLTLPKFYTQVLHLMNKMNLFPPFSPAIVPPI
LQEKSDFGEGDVRDMSESESEIESEKEDPQTLSTSPKRKLTMLKNIITDQDTSDPMSFVK
SVVSPHVPEQEVARKTISLNMPSNFNTIVEDTIFSDAVDDVNQETNLVFDFITLKQLGEG
RIGEKELSENPLFKNYRPGEPSCRLYVKNLSKKVTEKDMKFIFGSFVDFSSETDRNMFDV
RVMTHGRMKGQAFVGMPTVEAASKALEATNGYQLIGKPMVVVFARSIKPKQ
Nucleotide sequence
Length: 1,233
>Cisavi.CG.ENS81.R83.1042343-1043719.04762.t
ATCCTAATCAAGCATCTTCCAGCTGAACTGACTCCTCATGAAAAGAGGGAATTATTGAGA
TGTTTTGGAGCAGAAGACGTAAGAGTGATGTCACGAAACGGACAACTTCGTGATGCGGCA
TTCGCCACCTTCCCAAACCACCAGCAAGCAAAGACCGCTGTGAATAGACTGCATCAGCTT
GAAGTGCTCGGGTGTGTCTTGTCTGCCGAGTTCGCCCGCAAAGCCCATCAGAACCAAGCA
GTGGATGCTGTAGAAGATATCAATGCTGAGGAATCGAAAGAAATGCAAGAAAAAGATGAT
TCAAAGACTTTAAAAAGGTGCAAACACTGCCAACGTTTACCTCCTATTGCCCCTCATTTC
GGGGTCGAATATTTCACAAATCCGAAGCTAAAATACAAATACCCTGAACCCGACGCAGAC
ATATTATTAAACATCTGTGGAGCAATGTTGACTTTGCCCAAGTTCTACACTCAGGTGCTG
CATCTAATGAACAAGATGAATTTGTTTCCCCCATTTTCTCCGGCAATCGTTCCTCCAATT
TTGCAAGAAAAGTCAGATTTCGGGGAAGGTGATGTTCGCGATATGTCTGAATCAGAATCG
GAAATTGAAAGCGAGAAAGAAGATCCCCAAACCTTATCAACCTCGCCAAAACGTAAACTA
ACAATGTTAAAAAACATCATCACAGACCAAGACACTTCTGACCCAATGTCTTTTGTAAAG
TCAGTTGTCTCACCACATGTCCCTGAGCAGGAAGTCGCGAGAAAAACAATTTCGTTAAAC
ATGCCTTCAAATTTTAATACCATCGTTGAAGATACCATCTTTTCTGATGCTGTTGATGAC
GTGAATCAAGAAACGAATCTTGTTTTCGATTTCATTACCTTAAAGCAACTAGGCGAAGGT
CGGATCGGTGAGAAAGAATTATCAGAAAATCCTCTGTTTAAAAACTACCGACCCGGAGAA
CCATCGTGTAGGTTGTATGTGAAGAACCTCTCCAAGAAAGTCACCGAAAAAGACATGAAG
TTTATTTTCGGTTCATTTGTTGATTTCTCAAGTGAAACGGATAGAAATATGTTCGACGTG
AGAGTTATGACCCATGGTAGAATGAAGGGTCAAGCGTTTGTTGGGATGCCAACTGTGGAA
GCTGCGTCTAAAGCATTAGAAGCTACGAATGGATATCAACTGATCGGCAAACCTATGGTC
GTAGTGTTTGCAAGATCTATTAAACCAAAGCAA
| Pfam |
RRM_dom (IPR000504) - T[1-67] 4.8E-6 - T[325-398] 1.2E-8 |
| SMART |
RRM_dom (IPR000504) - T[1-70] 0.03 - T[324-402] 9.2E-12 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[1-74] 9.576 - T[323-406] 13.788 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[1-104] 7.2E-10 - T[319-411] 6.9E-24 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[1-75] 1.75E-9 - T[309-408] 9.0E-19 |
| CDD |
RBM40_RRM1 (IPR034147) - T[2-72] 1.55099E-31 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RBM40_HUMAN | 54.015 % | 153 | 1.86E-41 |
| RBM41_HUMAN | 39.344 % | 91.3 | 4.1E-20 |