- Transcript 'Phfumi.CG.MTP2014.S3...' >
- Transcript 'Cisavi.CG.ENS81.R19....' >
- Clone 'ciad017f24' >
- Transcript 'Cisavi.CG.ENS81.R90....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R90.318198-331613.16580.t
Possible name(s)
TBX4; TBX5; TBX6
Gene model
Location
R90 [320,141 / 331,292]
Amino acid sequence
Length: 182
>Cisavi.CG.ENS81.R90.318198-331613.16580.p
LWEQFHRRGTEMVITKTGRRMFPSFKVKVSGLSKSAKYIMLMDIVAADDCRYKFHNSRWM
VAGKADPELPKRMYIHPDSPATGVQWMNRPGVSFHKLKLTNNIADPHGHVSLAPQTTILN
SMHKYQPRFHVVRCGDLAKLPYCAFRTYVFKEMQFIAVTAYQNEKITQLKIDHNPFAKGF
RD
Nucleotide sequence
Length: 546
>Cisavi.CG.ENS81.R90.318198-331613.16580.t
CTCTGGGAACAATTCCACAGACGCGGAACTGAGATGGTGATAACGAAAACTGGAAGGCGG
ATGTTTCCTTCTTTCAAGGTGAAGGTGAGCGGCCTGAGCAAAAGCGCCAAGTACATAATG
CTCATGGACATCGTGGCTGCGGATGACTGCAGATATAAATTCCACAATTCAAGGTGGATG
GTGGCTGGAAAGGCCGACCCAGAGTTGCCAAAACGAATGTACATTCACCCTGATTCACCA
GCCACAGGGGTGCAGTGGATGAATCGACCCGGAGTGTCGTTCCACAAACTCAAACTCACC
AACAACATAGCGGATCCACACGGTCATGTCAGCTTGGCGCCACAAACAACAATTCTGAAC
TCCATGCACAAGTATCAGCCTCGTTTCCACGTTGTTCGATGTGGAGACCTTGCCAAACTG
CCATATTGTGCATTCAGGACATATGTCTTCAAAGAGATGCAGTTCATCGCTGTGACAGCC
TACCAGAATGAGAAGATAACTCAACTCAAAATTGACCACAATCCGTTTGCGAAGGGATTC
AGGGAT
| Pfam |
TF_T-box (IPR001699) - T[1-182] 6.1E-80 |
| CDD |
TF_T-box (IPR001699) - T[1-182] 1.35817E-116 |
| SMART |
TF_T-box (IPR001699) - T[1-182] 9.5E-103 |
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[1-182] 2.98E-72 |
| ProSitePatterns |
TF_T-box_CS (IPR018186) - T[1-20] . |
| PANTHER |
TF_T-box (IPR001699) - T[1-182] 1.9E-133 |
| Gene3D |
T-box_sf (IPR036960) - T[1-182] 3.7E-88 |
| ProSiteProfiles |
TF_T-box (IPR001699) - T[1-182] 71.073 |
| PRINTS |
TF_T-box (IPR001699) - T[9-33] 3.3E-33 - T[118-132] 3.3E-33 - T[153-166] 3.3E-33 - T[174-182] 3.3E-33 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBX2_HUMAN | 79.67 % | 303 | 2.99E-100 |
| TBX3_HUMAN | 73.333 % | 306 | 4.71E-101 |
| TBX4_HUMAN | 62.295 % | 234 | 2.77E-75 |