- Transcript 'Cisavi.CG.ENS81.R90....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R90.454100-458898.16640.t
Possible name(s)
CRX; OTX1; OTX2
Gene model
Location
R90 [454,099 / 458,898]
Amino acid sequence
Length: 422
>Cisavi.CG.ENS81.R90.454100-458898.16640.p
MSYLKSPHYAMNGLGLGHDMNLLHPTVTYPGDSAACYFQRIQGMHQGTKNMQFAAPPVYS
SSRKQRRERTTFTRAQLDILEALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKC
RQQVQQQQQKQKSGSGSGSSSSANNSSGSSSGSTNSNNNSSSSASKKKSPPTTPTPTATG
PAASTSPFQQLTAPPAHQPLAQSSSPPLPSSPVSSNGQIGPSVTPSELMGSSGAPLNHQG
SHGAHSGMVHTGSSSNIWSPASVSPGASSDGASNVPGIGYSGALVASNNSPYMAAAAAVA
HAAHSNYSATSNAQVTSGGYPQNYHTSHSYFGTMEASYLPSVPFPGAAPGCGMGDMSMSG
QQSASQLGHHGVGQAHSAPHHQFMPQSYPYHHATSGVTPTYPTVSECLDYKDQTQAWKFQ
VL
Nucleotide sequence
Length: 2,377
>Cisavi.CG.ENS81.R90.454100-458898.16640.t
ATTAGGCAAAACCCTGATAACTTAAAATATTAACAAATAAGGTATTTTTGAAATATTCTC
TGAGCAAACTTTCTGGAGTTTTAATACGCCTAAGCGAAAATCAGTTTTCAAGGAAATTGA
ACAAGTTCACGTCAAACACGAAAGTTAAGACTGACACATCATGTCATACTTGAAATCTCC
ACACTACGCAATGAATGGCCTGGGTCTGGGTCATGATATGAACCTTCTTCACCCTACAGT
TACTTATCCCGGAGATTCAGCGGCATGCTATTTTCAACGTATTCAAGGTATGCACCAGGG
AACTAAAAACATGCAATTCGCTGCACCTCCAGTTTACAGTTCTTCGAGAAAACAGCGACG
AGAGAGGACTACTTTTACCCGAGCCCAACTCGATATTTTGGAAGCGTTATTCGGAAAAAC
TAGATATCCGGACATTTTCATGAGGGAGGAAGTTGCTCTCAAGATCAATCTGCCAGAATC
CAGAGTTCAGGTTTGGTTCAAAAACCGTCGTGCAAAGTGCCGCCAACAAGTTCAGCAACA
GCAGCAGAAACAAAAATCCGGCTCCGGCAGTGGATCCAGCTCAAGTGCAAATAATAGCAG
TGGAAGTAGCTCCGGAAGCACAAACAGCAACAATAATAGCTCATCGAGCGCTTCGAAGAA
GAAAAGTCCCCCAACTACCCCTACTCCTACAGCAACCGGCCCTGCTGCAAGCACTTCCCC
ATTTCAACAACTAACTGCACCACCCGCACATCAGCCACTTGCCCAATCATCCAGTCCACC
ACTTCCCAGCTCTCCAGTGTCATCTAACGGACAAATTGGACCGTCTGTCACACCATCTGA
ACTTATGGGCAGCAGTGGCGCGCCATTAAACCACCAAGGTTCACACGGAGCACACAGTGG
AATGGTCCACACTGGAAGTTCGAGTAACATTTGGAGTCCAGCTTCAGTTTCACCAGGTGC
CAGTAGTGACGGTGCTTCAAATGTCCCAGGAATTGGATACAGTGGGGCCCTTGTCGCGAG
CAACAACTCTCCTTATATGGCGGCCGCCGCTGCAGTCGCGCATGCTGCACACTCAAATTA
TTCAGCTACTTCAAACGCACAAGTTACATCTGGAGGTTACCCACAAAACTATCATACCTC
GCACTCTTACTTCGGTACAATGGAAGCATCATATCTTCCATCTGTCCCTTTCCCGGGTGC
TGCTCCCGGATGCGGAATGGGCGACATGTCAATGTCTGGCCAGCAGTCTGCCTCACAGCT
TGGACACCATGGAGTCGGACAGGCCCATAGCGCCCCGCATCACCAGTTTATGCCCCAGTC
GTACCCGTACCACCACGCCACATCAGGTGTGACACCAACCTATCCCACAGTATCAGAATG
TCTCGATTACAAAGACCAAACACAGGCGTGGAAATTTCAAGTATTGTAACGCTGCGGCGT
TAGAGCTGAAACTTATATTAATCCACAGAGTGCTGGTTAGCTACACAGGCAAAGCAGCAA
ATAGCGAACAATGCGGAGGTAAAGCGCTAATACCAATTGCTGGTAGGGGAACATGACAAC
TTTTGCTGTTCTGTTTTGTTGGGTGACAACTACAATAACCGCTGGTCGGGAGTGCAAGAC
CATATCCTGTAAATACTCCCTTATAATCGCCGCTTGGTCAGCATACGCTGGGAAGGTAGC
GCCTCGCATTGTATGAAAAATTCAGTTTATGGCGTTGAGGTTGATGTTGTATTTTGTGTT
GTGCTTTTTTTAACGCTCAATGTTGTATTGCTTTATTTAACTTTTTTCGCAGTCGTAGTT
GGTTTATGTTACCTAAATTAACACTCGTTAATTGGGTACGCCAAGTTACGAAATAGGGTC
TTTATCGTAACCTGATTTTGGTGCATAACATATAGGTAAACGTCCAAGCACAGATATGAT
GTATCTGTAGTATTAAATATGAACAAATTACAAAAATAAATGTAAGTTGTACTATTTTGG
TTAAATTCTATGCTCTTCGTTTCCTTAAAAAATGATTTTTTTAAACTTATCGATTTTGCT
TTGTTTGCCAATATGACGTTTACTCTCGTGCCCGAATAAACCGTAATATCTAATTATTAC
AGTATTTTCAATCTAAAGACGACTTCTTAAAACAAAGGGCAAACTGTGCAATAGGAAATA
CTTTGATATTGAATGTTTTCTTCTGGCAAACGTATCAAAATCCGACTAATATTTTAAGAG
CCATTGAGATTTCCGTGTATAAAACATGCGTATTAATCTATTAAAGGCCGTTTCTATTTT
ACGGCAGTGTTGCTAAAAATACAATGTTATTTCCACCCCGTTTCTGTAAACAATTGTCTT
TTTATTGCTTTTGATCAATACATCAAGTTAAAATTAA
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[53-123] 3.04E-23 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[63-123] 19.224 |
| SMART |
Homeobox_dom (IPR001356) - T[65-127] 1.2E-23 |
| Pfam |
Homeobox_dom (IPR001356) - T[66-122] 1.8E-21 |
| CDD |
Homeobox_dom (IPR001356) - T[66-123] 1.52824E-23 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[98-121] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| OTX2_HUMAN | 64.754 % | 155 | 3.75E-44 |
| OTX1_HUMAN | 59.459 % | 166 | 1.16E-47 |
| CRX_HUMAN | 53.279 % | 129 | 3.55E-34 |