- Transcript 'Cisavi.CG.ENS81.R21....' >
- Molecular Tool 'Harore_Pem_mRNA (Negishi 2007)' >
- Transcript 'Cisavi.CG.ENS81.R9.3...'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R9.3161488-3163227.19019.t
Possible name(s)
IGF2BP1; IGF2BP2; IGF2BP3
Gene model
Location
R9 [3,161,487 / 3,163,227]
Amino acid sequence
Length: 580
>Cisavi.CG.ENS81.R9.3161488-3163227.19019.p
MNKVYIGNLPQDVAVEALCDVFASCSIELSNVVVNQKGFAFADCKDANQTDRAIECMNGF
SYGGKEMSVEHSVPRGSRSRKVQVRNIPSHLNWEELDKLLAEYGVVENCEQVSTESDTAT
VKVTYSGRSEAQSAIRDLNGKTVEGSILKVTLLPDPTDASRPPRNRFVNGYGGPFNNQQQ
GFVRPKNIPELPTRMLVPSQYVGAIIGKGGESIRAITQKTHARIDVHRKDNPGATEKAIT
INGTPEACGAAVAAILDIVRDEDRTARQAAGTYNDDDIPLKILAHNSLIGRLIGKEGRNL
KAIQEKVETKIAISNSMAEMQHFNAERTIAIYGDNDRCAEAEVLLMEKLRSCYESDMMIA
QQQPQQYPGLNMNQLSMFAGLHGGYGHPMRDYGMPPNYQGQNYRGQGGFNGDRAQMSETC
TLYIPAESVGAMIGSKGSHIRNISRIANASIKIVPPEDGDDEKQRRVTIMGSPEGQWKSQ
FCIFDKLKQEGFFNAEDERLTSELTIPAAIVGRVIGKGGNNVRELQRLTSSEVVIPRQSE
TEGMEEVPVKICGNFFANQSAQRKIRELLMKSREAERMGK
Nucleotide sequence
Length: 1,740
>Cisavi.CG.ENS81.R9.3161488-3163227.19019.t
ATGAATAAGGTGTACATCGGAAATTTACCGCAAGACGTGGCAGTTGAAGCACTCTGCGAC
GTTTTTGCGTCATGCAGCATCGAGTTATCTAACGTGGTTGTAAACCAGAAAGGCTTTGCT
TTCGCAGATTGCAAGGACGCTAACCAGACCGATAGAGCTATCGAGTGCATGAATGGTTTT
TCGTATGGTGGAAAAGAAATGAGCGTCGAGCATTCCGTGCCACGAGGATCGCGCAGCAGG
AAAGTTCAAGTGCGGAACATACCTTCCCACTTGAACTGGGAGGAGTTAGACAAATTGCTT
GCTGAATACGGAGTCGTTGAAAATTGCGAGCAAGTATCAACTGAATCTGACACTGCGACA
GTTAAAGTAACGTATAGTGGAAGATCGGAGGCTCAATCAGCAATCCGTGATCTTAATGGA
AAAACAGTGGAAGGAAGCATACTCAAGGTAACTCTGCTCCCAGATCCTACAGATGCTAGT
CGTCCACCACGAAATCGATTTGTGAATGGCTATGGAGGTCCATTCAATAACCAGCAACAA
GGATTTGTCCGCCCCAAGAACATTCCAGAGCTGCCGACCCGAATGCTCGTTCCTAGTCAA
TACGTTGGAGCAATTATTGGGAAAGGAGGTGAATCTATCCGAGCAATCACACAGAAAACC
CATGCACGAATAGATGTCCACCGCAAGGATAACCCTGGTGCAACCGAGAAGGCAATCACC
ATCAACGGAACTCCAGAAGCCTGCGGCGCTGCAGTTGCTGCCATTCTTGATATCGTGCGC
GATGAAGACCGTACTGCTCGTCAGGCTGCTGGCACATATAATGACGACGATATTCCACTT
AAAATACTTGCTCACAACTCTCTTATTGGGCGTCTTATTGGTAAAGAGGGCCGCAATCTT
AAAGCAATTCAAGAGAAAGTTGAGACAAAGATTGCAATCTCAAACAGCATGGCGGAAATG
CAGCATTTCAATGCAGAACGCACCATTGCAATTTATGGAGATAACGATAGATGTGCTGAA
GCGGAGGTACTGCTTATGGAGAAACTCCGCAGTTGCTATGAAAGTGACATGATGATTGCT
CAGCAACAACCCCAGCAATATCCTGGCCTCAACATGAACCAACTATCCATGTTCGCTGGG
CTGCATGGTGGTTATGGCCACCCAATGAGAGATTACGGAATGCCTCCAAACTACCAGGGT
CAGAACTACCGTGGCCAAGGAGGGTTTAATGGTGATCGTGCACAGATGAGCGAGACATGC
ACACTGTACATCCCAGCCGAATCTGTTGGAGCAATGATCGGTAGCAAAGGGAGTCACATC
CGAAATATCTCTCGAATTGCCAATGCCTCGATTAAGATCGTTCCACCAGAAGATGGCGAT
GATGAGAAGCAGCGTCGTGTCACTATCATGGGAAGTCCTGAGGGACAGTGGAAATCCCAA
TTCTGCATTTTTGATAAGCTGAAGCAGGAGGGCTTCTTCAATGCTGAGGACGAGAGATTG
ACTTCAGAGCTTACGATTCCTGCAGCAATCGTTGGCCGCGTGATTGGGAAGGGAGGAAAC
AATGTCCGGGAGCTTCAGCGTCTCACAAGCTCGGAGGTCGTGATCCCGCGTCAATCGGAG
ACCGAGGGTATGGAGGAGGTGCCGGTGAAGATCTGTGGAAACTTCTTCGCCAATCAGTCT
GCTCAAAGGAAGATCAGAGAGCTGCTGATGAAGTCACGAGAGGCAGAGCGAATGGGAAAG
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[1-80] 5.0E-15 - T[81-152] 1.3E-14 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[2-113] 1.11E-19 - T[79-178] 1.48E-14 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[2-74] 12.577 - T[80-155] 10.838 |
| SMART |
RRM_dom (IPR000504) - T[3-70] 1.6E-10 - T[81-151] 1.6E-7 |
| Pfam |
RRM_dom (IPR000504) - T[4-67] 1.5E-8 - T[84-148] 1.8E-8 |
| Gene3D |
KH_dom_type_1_sf (IPR036612) - T[186-261] 2.7E-22 - T[275-352] 2.9E-13 |
| SMART |
KH_dom (IPR004087) - T[189-260] 1.1E-16 - T[276-350] 1.6E-12 - T[416-488] 1.0E-6 - T[498-570] 4.2E-11 |
| SUPERFAMILY |
KH_dom_type_1_sf (IPR036612) - T[190-262] 4.53E-19 - T[277-355] 1.75E-13 - T[418-489] 1.75E-13 - T[498-572] 2.28E-13 |
| Pfam |
KH_dom_type_1 (IPR004088) - T[193-256] 2.2E-17 - T[281-347] 7.9E-12 - T[419-475] 1.5E-11 - T[502-567] 4.1E-10 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| IF2B1_HUMAN | 44.538 % | 478 | 9.07E-164 |
| IF2B2_HUMAN | 43.854 % | 467 | 5.07E-159 |
| IF2B3_HUMAN | 44.312 % | 468 | 1.36E-159 |