Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 1,043

>Cisavi.CG.ENS81.R98.284679-309909.03587.p
IFPAVPLPDRPPTITSPVLTTEPRIVLRDDTLRMKCIATGKPVPSVRWEKLNGNSVVSWP
NGRFRTEDFGRTAVISNASYGDSADYRCTATNALGEATRISKVLVHARPFFSVPENAPHD
VIKTPGSNVTIRCQAEGIPAPEVEWRVNGVPIAETSPMDNRVIHPTKIRISNLKVSDSAV
YQCIASNMHNSIIKQAYVNVLISMPLPVSSEDVEYVQVLGKTVEMKCNVFGSPSPAISWQ
KDGNKITENERFLIRKSKYLRISEVTFDDAGAYTCVATNEYGNATLSTSLTVFRRTKIQP
AAQYRYFVRRGESVTMSVKIDIDDGVVQGPVQWFKSDVLIGRGINYDVNNAAFTDSGSYK
VMVNTSLDHAAVHLTLVVQVSRNAPLSIDIPLPPLDFYVSPKSGGSPLDVTFTWQPAEDN
YSPIQEYKIEFEKDNYRPGKWFPLVDSIPGDRTSFDVTLAAGLRYKFRLWALNGIGWSEA
PSAETGSAPTANPSGVSGKGNTPTNMIITWDPVSPVGRNGPEFGYQITYCTAPDCTDKEV
LYVDGEVESYEVVNLPTYTQYIINIMSYNNIGNASVPQDVLGYSGEDVPLSAPSDVTVET
NEDDATVVIVRWQKVDPDSVRGKVLGYIVSYETPSSNGKLGFVGDTDMTGIAGLKPFTDY
SFKVAVYNDYSSGPFSQSYVITTPESTPGPPSTMRLRTTTDTGAHIAWGRPQEENGDVIG
YVIKFVCLNDSTEIGPISVEGTSYVTSQLRPNHMYDVTVAAQTLKGVGETANIVGEARCI
YDVISYLTLFFYANTKKPPVAARFNVTAGMTTANVTWYQVGGIPATKYFVEYKKSSNHGS
YSTEKTGEGVPLAGLDPGTSYLVRIVSNCGDDSRQTYMSWELTVICSAAASAGVVGEVWF
IVLMCIIVLLLIIIVIVCLLRRRKGGKYSVAEKEGQLVDQESQQIKSDEYNDETDDAKKP
LKSPPPVNGKSTPPDISSAVPLRTRGDSVAGDSIDAFGDDDAREFNEDGSFIGQYGAHES
GESSAAATPADDNPVINRSQGDA

Nucleotide sequence

Length: 3,129

>Cisavi.CG.ENS81.R98.284679-309909.03587.t
ATATTTCCAGCTGTTCCACTGCCGGACCGCCCACCAACTATTACGTCACCCGTCCTTACT
ACGGAACCACGAATTGTGCTCAGGGACGACACCTTACGGATGAAATGTATTGCTACGGGA
AAACCGGTACCGAGTGTACGATGGGAGAAATTAAATGGAAATTCGGTCGTTTCGTGGCCG
AACGGTCGATTTCGAACTGAAGATTTCGGACGAACAGCTGTCATTAGCAACGCGAGTTAT
GGGGATAGCGCCGATTACAGGTGCACAGCTACGAATGCGTTGGGGGAGGCGACGCGGATA
TCGAAGGTTCTGGTGCACGCTCGACCATTCTTCTCTGTCCCCGAAAATGCGCCTCATGAC
GTCATAAAGACACCTGGTAGTAACGTCACAATACGATGTCAAGCGGAGGGGATTCCCGCG
CCGGAAGTCGAGTGGAGGGTGAACGGGGTTCCGATCGCAGAAACTTCCCCGATGGATAAC
AGAGTGATCCATCCAACTAAAATTCGAATCAGCAATCTGAAGGTGTCTGACTCGGCCGTG
TACCAATGCATCGCTAGCAACATGCATAACTCCATTATTAAACAAGCATATGTGAATGTG
CTCATTTCTATGCCTTTGCCTGTATCGTCGGAAGACGTGGAATACGTGCAAGTGTTGGGG
AAAACTGTGGAGATGAAATGTAATGTGTTTGGGTCGCCCTCTCCCGCCATCTCGTGGCAG
AAAGATGGAAACAAAATTACAGAAAACGAAAGGTTTCTTATACGGAAAAGTAAATATCTT
CGCATCAGTGAAGTAACATTCGACGATGCTGGAGCCTACACTTGCGTAGCGACAAATGAA
TACGGGAACGCAACACTCAGCACCTCACTTACAGTGTTCCGTCGTACGAAGATACAACCA
GCTGCCCAATACCGCTATTTCGTCAGGCGGGGAGAATCAGTCACTATGTCTGTTAAGATT
GACATTGATGACGGTGTGGTACAAGGACCAGTTCAATGGTTCAAATCCGATGTTCTTATT
GGACGAGGAATCAATTATGACGTCAACAATGCGGCATTCACGGATAGCGGAAGCTACAAG
GTCATGGTTAACACCAGTCTTGACCACGCGGCTGTGCACTTGACTCTGGTTGTTCAAGTA
TCACGAAATGCACCACTTTCCATAGATATCCCATTACCTCCGCTGGATTTCTATGTTTCT
CCCAAATCGGGGGGATCCCCCCTGGATGTAACGTTCACATGGCAACCAGCTGAAGACAAT
TACTCCCCGATACAAGAATACAAGATAGAATTTGAGAAAGACAACTATCGACCGGGGAAG
TGGTTTCCATTGGTCGATTCGATACCTGGCGACCGAACCTCTTTCGATGTAACCTTGGCA
GCTGGGTTGCGATATAAATTCCGCTTGTGGGCGCTAAACGGCATTGGGTGGAGCGAGGCG
CCCAGTGCTGAGACAGGCTCCGCTCCAACAGCAAACCCAAGTGGGGTGTCGGGCAAGGGG
AATACCCCAACCAATATGATCATCACGTGGGACCCGGTGAGCCCAGTGGGGCGTAACGGA
CCGGAATTCGGGTACCAGATTACATACTGCACCGCTCCCGACTGTACCGACAAAGAAGTT
CTTTATGTGGACGGGGAAGTCGAATCTTATGAAGTAGTCAACCTTCCAACATACACCCAA
TACATCATTAACATTATGAGCTACAATAATATCGGTAACGCTTCCGTACCGCAAGACGTA
CTGGGATACTCTGGCGAAGACGTTCCATTGTCTGCTCCAAGTGATGTCACAGTTGAAACA
AACGAAGATGACGCAACAGTGGTGATTGTGAGGTGGCAAAAAGTTGACCCAGATTCAGTA
AGAGGAAAAGTGCTGGGTTACATCGTGTCCTACGAGACACCTTCAAGCAATGGTAAGTTG
GGATTTGTGGGCGACACCGATATGACAGGAATCGCTGGACTCAAACCTTTCACCGATTAC
TCGTTTAAAGTGGCCGTGTACAACGACTATTCCAGCGGACCATTCTCCCAATCCTACGTC
ATAACCACCCCTGAAAGCACCCCCGGCCCCCCATCTACTATGAGACTCCGTACAACAACC
GATACTGGGGCACACATTGCATGGGGACGCCCCCAAGAAGAGAATGGTGATGTCATCGGC
TATGTGATCAAATTCGTATGCTTGAACGATTCAACTGAAATTGGACCAATCAGCGTCGAA
GGTACATCTTACGTCACCTCTCAGTTGCGTCCGAATCATATGTATGACGTCACAGTGGCC
GCGCAAACTTTAAAGGGGGTCGGTGAAACAGCAAACATTGTTGGTGAAGCGCGATGTATT
TATGACGTCATTTCCTATTTAACGCTTTTTTTTTATGCAAACACGAAAAAACCCCCGGTT
GCCGCAAGATTCAATGTAACTGCTGGTATGACAACTGCAAACGTCACGTGGTATCAGGTG
GGGGGAATTCCCGCAACCAAGTATTTCGTCGAATACAAGAAATCAAGTAACCATGGTTCT
TATTCTACTGAGAAAACCGGCGAGGGCGTGCCGCTGGCTGGTCTCGATCCCGGTACCTCC
TACTTAGTGAGAATAGTGTCGAATTGCGGTGACGATTCTCGCCAAACCTACATGTCATGG
GAATTAACTGTTATTTGTTCAGCGGCTGCGAGCGCTGGGGTTGTCGGCGAAGTTTGGTTC
ATCGTGCTAATGTGCATCATTGTCCTGCTGCTGATTATCATCGTCATAGTGTGCCTTCTT
CGTCGACGGAAAGGCGGAAAGTATTCAGTTGCAGAGAAAGAAGGACAGCTCGTGGATCAG
GAATCCCAGCAGATTAAATCCGACGAATACAACGACGAAACAGACGACGCGAAGAAGCCA
TTGAAGAGTCCGCCGCCGGTGAACGGAAAATCCACTCCTCCCGACATATCTTCCGCCGTT
CCGCTGCGCACGCGTGGGGACAGTGTAGCCGGCGATTCCATCGACGCGTTCGGTGACGAC
GACGCGCGAGAATTCAACGAGGATGGTTCGTTCATCGGCCAGTACGGGGCGCACGAGAGC
GGGGAAAGCAGCGCCGCAGCGACACCTGCCGACGACAATCCGGTGATAAACCGATCGCAG
GGTGACGCT

InterProScan

Gene3D	Ig-like_fold (IPR013783) - T[8-114] 3.4E-15 - T[115-201] 8.2E-19 - T[208-293] 6.1E-21 - T[388-489] 3.6E-13 - T[490-585] 1.5E-17 - T[586-680] 1.8E-16 - T[681-777] 1.4E-15 - T[788-878] 3.0E-6
ProSiteProfiles	Ig-like_dom (IPR007110) - T[12-101] 10.499 - T[109-199] 12.423 - T[205-291] 13.639
SMART	Ig_sub (IPR003599) - T[21-106] 7.2E-6 - T[118-201] 3.6E-11 - T[212-293] 3.7E-11 - T[303-379] 2.4
SUPERFAMILY	Ig-like_dom_sf (IPR036179) - T[21-111] 3.39E-16 - T[107-200] 2.09E-17 - T[216-294] 8.08E-22 - T[306-385] 5.0E-5
SMART	Ig_sub2 (IPR003598) - T[27-95] 3.3E-11 - T[124-190] 4.7E-11 - T[218-282] 4.9E-18
Pfam	Ig_I-set (IPR013098) - T[219-292] 2.9E-20
SUPERFAMILY	FN3_sf (IPR036116) - T[389-580] 6.56E-21 - T[591-772] 1.06E-32 - T[798-868] 1.99E-6
CDD	FN3_dom (IPR003961) - T[391-485] 1.92464E-11 - T[492-572] 7.74902E-10 - T[591-683] 4.4446E-10 - T[688-774] 6.52292E-12
SMART	FN3_dom (IPR003961) - T[391-478] 2.8E-4 - T[490-575] 7.1E-5 - T[590-673] 5.6E-7 - T[688-768] 3.2E-9 - T[798-875] 0.46
ProSiteProfiles	FN3_dom (IPR003961) - T[393-491] 15.053 - T[492-591] 16.197 - T[592-686] 17.807 - T[690-782] 15.164 - T[798-889] 9.231
Pfam	FN3_dom (IPR003961) - T[492-572] 9.0E-8 - T[591-676] 1.2E-8 - T[690-769] 5.5E-8
Pfam	Neurofascin/L1/NrCAM_C (IPR026966) - T[921-1018] 1.5E-20