Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'KH2012:KH.S1404.1.v1...' > 
  2. Transcript 'Cisavi.CG.ENS81.R99....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R99.177238-182374.07170.t

Possible name(s)

NELFE

Gene model

Cisavi.CG.ENS81.R99.177238-182374

Location

R99 [177,237 / 182,374]

Sequences

Amino acid sequence

Length: 275

>Cisavi.CG.ENS81.R99.177238-182374.07170.p
PLKRKREQDEKSGNTPNANQKNKSHIPGGASKSQEFLTAKKKLAAKPIKSFDAAANTEAA
KKLLKAGAIEVKLEKKTSFKRSSNLKRKLSAHPETGKRPTFQSFSTGSDTGTDTDEIPEP
KTSKLDSTEPSSKPFNENYKPKKEQRARAPRREKRVEKKAPRKGNTLYIHGYVINETVIR
KHFTKFGNIIKVNMEKDKNSGFVSYDSFEAAEKAIVDMDDSLVDDCRIKVSLARHQPLLE
SVAQETPWGGLVERGDKGASIQDSRTLVSYEDDLF

Nucleotide sequence

Length: 1,063

>Cisavi.CG.ENS81.R99.177238-182374.07170.t
ATGGTCTTCTCATCAAGACTAACTGAAGAAGAGCAGTTACTGAAAAAACAATATGAAGTT
TTGCGGAATTTGAAAAAGGAGCTGAAAGTTTTGACCTCTGAAAAGGAAACGAGAACAAGA
TGAGAAATCGGGAAATACCCCAAACGCAAACCAGAAAAATAAGTCTCATATTCCGGGTGG
TGCTTCAAAGTCCCAAGAATTCCTGACAGCCAAGAAAAAATTGGCAGCGAAACCGATAAA
ATCGTTTGACGCTGCTGCGAATACAGAGGCTGCAAAGAAACTTCTGAAAGCAGGAGCAAT
TGAAGTCAAACTGGAGAAGAAAACCTCGTTCAAACGATCTTCGAATCTCAAACGAAAACT
TTCCGCTCACCCAGAGACGGGTAAGCGACCGACATTTCAATCGTTTAGCACGGGTAGCGA
CACTGGAACGGACACAGACGAGATTCCTGAACCCAAGACTTCGAAACTGGATTCAACAGA
ACCAAGTTCCAAACCTTTTAATGAAAACTACAAACCGAAAAAGGAACAGAGAGCAAGAGC
ACCTAGGAGAGAGAAGAGAGTTGAGAAAAAGGCACCAAGAAAAGGAAATACGCTCTACAT
CCATGGTTATGTAATCAACGAAACTGTGATTAGAAAACATTTTACCAAGTTTGGCAACAT
CATTAAAGTGAATATGGAAAAGGACAAAAATTCAGGATTTGTGAGCTACGATTCATTTGA
AGCCGCAGAAAAAGCGATCGTTGACATGGACGACTCCTTGGTTGACGATTGCCGCATAAA
GGTGTCGCTGGCAAGGCACCAACCCCTTTTAGAATCGGTGGCGCAAGAAACGCCTTGGGG
TGGCTTAGTGGAACGAGGGGACAAAGGAGCTTCCATCCAGGACAGCAGGACTCTTGTGTC
GTACGAAGATGATTTGTTTTGAAGTGAATTTAGACGTGCGGCCAAACTAGGCGTACATTG
CATGGGTTCAGGGGTGCACATCTACCCCAGAGATGCATCAGAATCAGCAGCCAGAATATA
CGGAATTGAATTGTTGTTTTTCTTCCAACGCGTTTAAAGAGAC

InterProScan

PANTHER
NELFE (IPR033102) - T[4-145] 1.9E-64 - T[142-275] 1.9E-64
SUPERFAMILY
RBD_domain_sf (IPR035979) - T[143-239] 7.06E-18
Gene3D
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[160-244] 3.5E-19
CDD
NELFE_RRM (IPR034637) - T[161-235] 8.48496E-35
ProSiteProfiles
RRM_dom (IPR000504) - T[165-235] 13.243
SMART
RRM_dom (IPR000504) - T[166-231] 7.0E-10
Pfam
RRM_dom (IPR000504) - T[174-229] 6.2E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NELFE_HUMAN 36.975 % 109 1.13E-27