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  1. Transcript 'Cisavi.CG.ENS81.R99....'

Transcript Model

Transcript Id

Cisavi.CG.ENS81.R99.366717-379426.07956.t

Possible name(s)

TSPAN17; TSPAN33; TSPAN5

Gene model

Cisavi.CG.ENS81.R99.366717-379426

Location

R99 [366,716 / 379,426]

Sequences

Amino acid sequence

Length: 435

>Cisavi.CG.ENS81.R99.366717-379426.07956.p
MPPPSPVVSYPGNSLTYPPTTGPLEVIQPVHIEPVIVTSQMHGPPPTRPQNVVVDIENPL
NSRNRSPEAKGLRHGGDSGIDLTNYEQNRDRLSSDPSEYDIKRRHSKQVLTQDTPSEPTS
SPYMEWYRRQYLKPTCCHLFIKHVICAINLVFLIIGLGLIGLGLWGFIDLMTSGNPGSAE
VFLFDPILIVLVTGVVISFITAIAIIGIMKDSVCLIKTYISLLVVLCIILVAGGITFWVL
RPKVTAFATSSLANLIAAYNTTSRKAASFTINQLQTQLACCGASGHEDWILNRAYSCSDP
TTCSLPPSCCETNQVACTGRPGARPGCIAALTSWIKNNTVLLIGIWLGVIVVFIVFQFVA
VHFHVSFCLFQALQLKIAAYEADLSVDDVTTTSSSSSASSSESEERERRRRRRKRRKKRR
TNHKRRNYHVNPAYS

Nucleotide sequence

Length: 1,583

>Cisavi.CG.ENS81.R99.366717-379426.07956.t
GTCATAATTCAGGAGCCACCAGAGCCATCCCCACTTCAGGGTCAAGCCGATTGAGGAAAT
AACCGCTGTGACCCATCGTCCGAACCCCCCACCCAACATCGAACCCATCGAGCCCCAATA
CAGGGTGGTTGATGTTCCTCCTGTGGTGTTTACCCCTGCACCTATACCAGTACCAGAACC
GGAAATCATAGAAATGCCGCCTCCTTCACCGGTTGTCTCCTATCCGGGGAACTCCCTAAC
ATACCCACCGACTACGGGGCCTCTTGAGGTGATCCAACCCGTCCATATCGAGCCGGTGAT
TGTGACATCACAGATGCACGGTCCACCCCCCACCCGACCCCAGAATGTCGTTGTTGACAT
CGAGAACCCCCTCAACAGTCGAAACAGAAGCCCCGAAGCAAAGGGACTGAGGCACGGCGG
GGACAGTGGTATTGATCTCACAAACTATGAACAGAACAGGGACAGATTGTCGTCAGATCC
ATCAGAGTACGACATTAAAAGAAGACATTCTAAACAAGTTTTAACCCAAGACACCCCATC
CGAACCCACCAGCAGTCCATATATGGAGTGGTACAGACGACAGTACTTGAAACCGACTTG
CTGTCACCTGTTCATTAAACATGTCATTTGTGCAATCAACCTCGTATTTCTTATCATCGG
TCTTGGTCTGATTGGCTTGGGGTTATGGGGGTTCATTGACCTTATGACCTCAGGTAACCC
CGGATCAGCAGAGGTGTTTCTGTTTGACCCGATATTAATAGTTCTGGTGACAGGAGTTGT
AATTTCATTCATCACCGCAATTGCAATAATTGGGATTATGAAGGACAGTGTATGTCTTAT
AAAAACGTACATCTCCCTGCTTGTAGTGCTGTGCATTATATTGGTGGCTGGGGGAATAAC
CTTTTGGGTGTTGAGACCTAAAGTGACGGCTTTTGCCACAAGCTCTCTTGCCAACCTGAT
CGCGGCGTACAACACAACAAGTCGTAAAGCAGCTTCCTTCACCATCAATCAGCTGCAGAC
ACAACTTGCTTGTTGTGGGGCATCTGGCCATGAGGACTGGATTCTTAACAGGGCATACAG
CTGCTCAGATCCAACTACCTGCTCTCTGCCGCCATCTTGCTGTGAAACTAACCAAGTTGC
TTGCACTGGACGTCCAGGAGCAAGGCCAGGCTGTATTGCAGCGTTGACGTCATGGATAAA
GAACAACACTGTTCTGTTGATTGGGATATGGCTGGGTGTAATTGTTGTATTCATTGTTTT
CCAATTCGTCGCCGTACATTTTCATGTGAGTTTTTGCCTTTTCCAAGCTCTACAGCTCAA
AATAGCTGCCTACGAGGCGGATTTGAGCGTTGATGACGTCACTACTACGTCATCATCATC
ATCCGCGTCATCGAGCGAGTCGGAGGAACGCGAAAGACGACGACGTCGGCGGAAACGACG
TAAGAAGAGACGAACCAATCACAAGCGCCGAAACTATCACGTGAATCCCGCGTACAGTTG
AAAACAAAGTCGTTAATTGATTGATTGACGTTTAACGCCAGCACTTGAACTGTTCTGTAT
ATATTTTTGGGAATAAATCGAAC

InterProScan

Pfam
Tetraspanin/Peripherin (IPR018499) - T[141-368] 2.3E-30
PRINTS
Tetraspanin (IPR000301) - T[143-166] 1.4E-10 - T[183-209] 1.4E-10 - T[210-238] 1.4E-10
SUPERFAMILY
Tetraspanin_EC2_sf (IPR008952) - T[238-338] 3.01E-11
Gene3D
Tetraspanin_EC2_sf (IPR008952) - T[240-337] 2.5E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TSN5_HUMAN 25.101 % 87.8 1.44E-19