- Clone 'cima017c09' >
- Clone 'ciad054f05' >
- Clone 'cima816015' >
- Clone 'ciem817k03' >
- Transcript 'Cisavi.CG.ENS81.R99....'
Transcript Model
Transcript Id
Cisavi.CG.ENS81.R99.760680-769350.08624.t
Possible name(s)
CFP; HMCN1; SSPO
Gene model
Location
R99 [760,679 / 763,290]
Amino acid sequence
Length: 300
>Cisavi.CG.ENS81.R99.760680-769350.08624.p
MAPCARWSEWSDYGSCQASCGATGQQVRSRSCTLNNGSPSNQCTGGSSTSTRFCQGPACP
ALWANWQSWGSCQLDCTRSRQRNCRVNGQVVSQSRCSGFSSERLQCPGGCPSLDPPNGQS
WVSWGSWSGYGICTRTCGGGTQTRYRRCYYLGRSNSPIGSDYCTFTHQTQSSDGRPCRTT
PCPNTYTWTNWSPYGQCRSNAPGSCSGRQTSSRRCINPASNQQVQSPNCAPGVDTRTQSC
NACQQDNTYGNWYAWGACSAPCHSGSNRPTRVRARCRTGTNCTQQSHWDIVTENCNTNPC
Nucleotide sequence
Length: 1,191
>Cisavi.CG.ENS81.R99.760680-769350.08624.t
CACGAAGGTGCCAAATGGCTCCATGTGCACGATGGAGCGAGTGGAGTGATTACGGTAGCT
GTCAGGCTTCGTGCGGCGCCACCGGGCAACAGGTGCGAAGTCGAAGCTGCACATTAAACA
ACGGTTCCCCTTCTAATCAATGCACAGGGGGGTCATCGACAAGTACCCGATTTTGCCAAG
GTCCAGCGTGTCCCGCTCTCTGGGCAAACTGGCAGTCATGGGGTTCATGTCAGTTAGACT
GCACCCGTTCAAGGCAGCGAAATTGTCGTGTAAACGGGCAAGTTGTGTCTCAGAGCCGCT
GTAGTGGATTTTCTAGCGAACGGTTGCAATGCCCCGGGGGTTGTCCGAGTCTCGACCCCC
CGAACGGGCAGTCGTGGGTGTCGTGGGGTTCCTGGAGCGGCTATGGAATCTGCACCCGTA
CATGTGGTGGAGGCACACAGACCAGGTATAGGAGATGCTACTACCTGGGCAGATCTAACT
CACCAATTGGGAGTGATTACTGTACGTTCACCCACCAAACGCAATCATCCGATGGAAGAC
CTTGTCGAACTACACCATGCCCAAACACTTACACATGGACAAACTGGTCCCCATATGGTC
AGTGCAGATCCAACGCACCCGGTAGTTGCTCTGGTCGACAAACTTCATCTAGGAGGTGCA
TCAACCCAGCGAGCAATCAACAGGTCCAATCGCCTAACTGTGCTCCAGGGGTGGACACTC
GCACCCAAAGCTGCAACGCTTGTCAGCAAGACAACACTTATGGGAATTGGTACGCTTGGG
GAGCGTGCAGTGCTCCTTGCCACAGTGGTTCAAATCGACCAACCCGCGTTCGAGCCAGGT
GTAGAACTGGCACCAACTGTACACAACAAAGCCATTGGGACATTGTTACAGAAAATTGCA
ATACAAATCCGTGCTAACATTTTTGTACGAATTTAAAATCAAATTTGGTCTTACTTAAGC
AATGAACATACTTCTTTGCATTTACTAATAGATTTATATCAGCAATGGTAAAACGAGGCA
ACCATTGCGTACCAGATTCATGTGAAATGTGTTTTATTCGCCATTAATGCGAATGTATTT
TAAAACTTAGCTCTTCGTTTTAAAAGTGTTATTACTCAAATGTTTTGCTTCCACGTTTTT
ATCAAACTACCATTTTACCCTTAAATAAAACGTTCATCATTATACACAACA
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[4-54] 1.05E-7 - T[123-182] 2.88E-7 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[4-60] 11.172 - T[121-183] 10.456 - T[185-244] 8.61 - T[246-299] 8.016 |
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[4-60] 5.0E-8 - T[120-183] 2.3E-9 |
| SMART |
TSP1_rpt (IPR000884) - T[7-60] 1.1E-5 - T[63-111] 0.37 - T[124-183] 1.0E-4 - T[188-244] 2.0 - T[249-299] 0.58 |
| Pfam |
TSP1_rpt (IPR000884) - T[8-59] 2.3E-4 - T[126-151] 0.0037 - T[250-300] 0.068 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HMCN1_HUMAN | 33.566 % | 80.5 | 9.89E-17 |