- Transcript 'Cisavi.CG.ENS81.R9.3...' >
- Transcript 'Phmamm.CG.MTP2014.S8...' >
- Transcript 'Boleac.CG.SB_v3.S277...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S277.g06543.01.t
Possible name(s)
STRN; STRN3; STRN4
Gene model
Location
S277 [145,716 / 160,234]
Amino acid sequence
Length: 710
>Boleac.CG.SB_v3.S277.g06543.01.p
MYYSSMSMDGELSINMPNGSGSHEEQPNDHKSGYTMPGILHFIQHEWSRFEMERAQWEVE
KAELKARIGFLQGERKGQENLKRDLVRRIKMLEFALKQERAKLHQQKFGVGTMEDDANSS
LDINLPADSHQNNSQMPFRQGRQLLRQYLQEVGYSDTILDVRSQRVRSLFGKIHNSSSTS
TDDKSKAHSSVGDHEEISGDRVGTIETEVLNNFDFLSGQLNDPEDDIGEVDMYEMNTAEG
QQNSETDEDDRLIISDDLDTDSALAEFDFLSVTDGGDTVDSGIIGWHVDRNKLNAKKEKF
IEQKKQSKKKGLNRGCHFLGPVKKDLQSMLETLQGSPDGIPPYRLGVAEANKIDEDSSLF
GARNVLGDESDALRLGELAGLTVANEADPLTYDVSIVFHFDGVRGIVFLPTEPAVITASE
DNTLKLWNLSKTLPSKKPQALDVEPIYSFRGHVGAVLSVTLNTDGTSCYSGGIDSSIRMW
AIPSTQIDTCDPYVSSATDKVLVGHTDSVWSLSYSGTRHHLLSASADTTVRLWDPQSSDP
LIRTFAASGGSTPSSATFISCDSGRAAVSHTDGKVLIYDLETGQVPITLADADGCRINSI
VSHPTMPITVSAHDDRYIRFYDNVSGKPIHSMVAHLDAVTCXSVDPNGLYLLSGSHDCSV
RLWNFESKTCVQEITCHRKKFDESINAVAFHQSASYIASGGSDALAKVFI
Nucleotide sequence
Length: 2,890
>Boleac.CG.SB_v3.S277.g06543.01.t
AGGCCTAGCTGCTGTTGGTTCAACCATACTATGAGTAAGGCTGCTAAATAGCTCATTTGG
TCAATTTAATGTATTATTCATCAATGAGCATGGACGGTGAACTCTCCATTAATATGCCAA
ATGGGAGTGGAAGCCACGAAGAGCAGCCGAATGATCATAAGAGTGGCTATACTATGCCTG
GGATACTTCATTTCATACAACATGAGTGGTCGCGCTTCGAGATGGAACGGGCACAGTGGG
AAGTTGAGAAGGCCGAGCTCAAGGCAAGGATAGGATTTTTGCAAGGAGAACGCAAGGGGC
AGGAAAATCTCAAGAGGGACCTTGTACGAAGAATAAAAATGCTGGAGTTTGCTCTCAAGC
AAGAAAGGGCAAAGCTTCATCAGCAAAAATTTGGAGTCGGAACAATGGAAGACGATGCGA
ATTCTTCTCTAGATATAAATCTTCCTGCTGACTCCCATCAAAATAATTCACAGATGCCAT
TTCGACAAGGAAGACAACTACTTAGACAGTATCTACAAGAGGTGGGCTACAGTGACACGA
TTCTTGATGTGCGGTCACAAAGGGTTCGGTCATTGTTTGGAAAAATTCATAATTCATCCT
CAACAAGTACTGATGACAAATCAAAAGCTCATAGCAGTGTTGGGGACCACGAGGAAATAT
CAGGAGATAGAGTCGGTACCATTGAAACGGAAGTTTTGAATAATTTTGACTTCTTGTCTG
GACAACTGAATGATCCAGAGGACGATATAGGTGAAGTGGACATGTATGAGATGAATACTG
CTGAGGGTCAACAAAATTCTGAGACTGATGAAGATGACAGACTCATAATTAGTGATGATT
TGGATACAGACTCAGCGTTGGCAGAATTTGACTTCCTTTCGGTAACTGATGGTGGTGATA
CTGTTGATTCTGGCATCATTGGATGGCACGTAGACAGAAACAAGTTGAATGCAAAGAAAG
AAAAATTCATTGAACAGAAGAAACAGTCAAAAAAGAAAGGACTGAACCGTGGGTGTCATT
TTCTAGGCCCTGTCAAGAAAGATCTTCAAAGTATGCTAGAAACACTCCAAGGATCTCCAG
ATGGCATTCCTCCCTATCGTCTGGGTGTTGCAGAAGCTAATAAAATTGATGAAGATTCTT
CTCTGTTCGGTGCCAGAAATGTTCTGGGGGATGAATCTGATGCTTTGAGATTGGGAGAGC
TTGCAGGCCTGACTGTTGCCAATGAAGCTGACCCTCTCACATATGACGTGAGTATTGTGT
TTCATTTCGATGGTGTCCGTGGTATTGTGTTTCTTCCCACTGAACCTGCCGTAATCACTG
CTTCTGAAGATAATACTTTAAAGCTGTGGAATTTAAGTAAAACATTACCAAGCAAAAAAC
CTCAAGCACTCGATGTCGAGCCTATATACAGTTTCAGAGGACATGTCGGTGCAGTGTTAT
CGGTGACTTTGAACACGGATGGCACATCCTGCTACAGTGGTGGCATCGATTCTAGTATCA
GAATGTGGGCCATTCCAAGCACGCAAATTGACACTTGTGATCCATATGTATCCTCTGCAA
CAGATAAAGTTCTTGTTGGTCACACAGACTCCGTTTGGAGCTTGTCCTATTCAGGCACAA
GGCATCATTTGCTCAGTGCCTCAGCAGATACAACAGTTCGATTATGGGATCCTCAGTCAT
CAGATCCATTGATAAGGACGTTTGCCGCTTCAGGCGGTTCAACACCATCAAGCGCAACAT
TCATTTCATGTGACTCTGGCAGAGCGGCTGTTTCTCACACTGACGGAAAAGTTTTAATTT
ATGACTTGGAGACCGGACAAGTCCCAATTACGCTAGCGGATGCAGATGGGTGCCGGATTA
ACAGTATTGTGAGCCACCCTACCATGCCAATTACAGTATCTGCTCATGACGATAGATACA
TTCGTTTCTATGATAATGTCTCAGGCAAGCCTATTCACTCGATGGTGGCACATCTCGATG
CCGTCACCTGTNTGTCTGTTGACCCAAATGGATTATACTTGCTCTCTGGAAGTCATGACT
GCTCCGTCAGACTCTGGAATTTTGAAAGCAAGACGTGTGTACAAGAAATCACTTGCCACC
GAAAGAAATTCGATGAGTCGATCAATGCTGTGGCATTCCACCAGTCAGCATCATACATTG
CCAGCGGGGGCTCGGACGCATTGGCGAAAGTTTTTATTTGAGCCGTTTCAAGATATATGA
GGACCGGTTATGTAGGCCTTTGATGGTTTGACACTGTCAAATGGAGACAGTATGGATTTC
CAATCACAAATCAAGGAACTCTATCAGCAAACCGCATTATAAGATAGACGTATGCACGCA
CACCGAGTACGGGAGGTCCATAGCGTGATCGTTATGGCGACATTTGCAACAAGAATGTAA
AAAATTCCCTGTATTCACGACACGCGTCGCAGAATCTATGTGTGGGTGTTTACAAAACCT
TATGTGACTGTACTCTACTGCAATACTAATTGATTGTAATCGATTGCAAGCTGCTGACAA
TTCTTGTAATTTCAACTATCATATCAGTCATTTGCGGTATCTCTTGTCGACAATAATGTA
AGCAAAATCTATATATTGACCCATGTATCGTTTTTCTTGAGATTTGCCGATAGACGGCAA
CATCTACTAATTATTTTTCTTGGTCTCTGTTATTTAGTGTGTTGACGACAAATTTCCGCA
CACAATATGAACTTACTTTTTGCGGTATGTCATTATGCTGTAGATGGAAAATTGAACACA
ATATTGTCTTGTTTTGACTCGTGTCTNAAGGGTAACCATACTAATTCATGGTTTTCAGCT
TCACCCAGCATCAGCAGAGCCATTCTACGTCAAAATATTGGAGGAATTGAATCAGGTGGT
CACCCGTACC
| Pfam |
Striatin_N (IPR013258) - T[35-160] 1.1E-41 |
| SMART |
WD40_repeat (IPR001680) - T[389-428] 0.025 - T[442-481] 5.3E-6 - T[495-534] 2.0E-7 - T[538-579] 13.0 - T[582-622] 3.0 - T[625-664] 3.5E-9 - T[667-710] 0.0027 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[391-549] 1.3E-30 - T[550-709] 1.1E-32 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[395-709] 6.05E-60 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[396-710] 41.71 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[396-430] 11.511 - T[449-480] 11.611 - T[502-543] 14.786 - T[632-673] 14.218 |
| Pfam |
WD40_repeat (IPR001680) - T[398-428] 0.045 - T[444-480] 0.0043 - T[500-534] 5.5E-5 - T[626-664] 1.2E-7 - T[669-704] 0.03 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[415-429] . - T[651-665] . |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[415-429] 6.9E-7 - T[521-535] 6.9E-7 - T[651-665] 6.9E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| STRN3_HUMAN | 45.95 % | 610 | 0 |
| STRN_HUMAN | 46.338 % | 600 | 0 |
| STRN4_HUMAN | 43.056 % | 513 | 6.83E-173 |