- Transcript 'KH2012:KH.C9.406.v1....' >
- Transcript 'Boleac.CG.SB_v3.S296...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S296.g06985.01.t
Possible name(s)
CALM1; TNNC1; TNNC2
Gene model
Location
S296 [9,500 / 19,662]
Amino acid sequence
Length: 203
>Boleac.CG.SB_v3.S296.g06985.01.p
MSLTVEEARASLTKEQISEFKQAFDIFDQDGGGDISTKELGRVMKLLGQSPSKEELDKII
EEVDVDGSGTIDFDEFLIMMVMQISEEGKNSGEEELKDIFRLFDKNGDNVLDWSEIRDAL
MAVNAEPPVQNWEIDELFKEADKNGDGCIDIEDWSEIRDALMAVNAEPPVQNWEIDELFK
EADKNGDGCIDIEEWSIWMDGVK
Nucleotide sequence
Length: 987
>Boleac.CG.SB_v3.S296.g06985.01.t
GTCGCACCAGGCATTCGATGCAGGATACGATGTCCTGAGCGTNTGGGAATTGAGTAACGG
CTCCTCATCGCAGTTGCGTACCATTTGACACTGCGGTAACAAGCTCACAAAGGCCGGATA
ATGTCTTTAACGGTTGAAGAAGCCAGAGCGTCGCTAACTAAAGAACAGATTTCAGAGTTC
AAGCAGGCTTTTGATATATTTGACCAAGATGGCGGAGGAGATATCAGCACAAAAGAATTG
GGACGCGTCATGAAGCTCCTTGGTCAGTCTCCTTCCAAAGAGGAGTTAGACAAGATAATC
GAGGAAGTCGATGTCGATGGAAGCGGAACGATCGATTTTGACGAATTTCTAATCATGATG
GTAATGCAGATAAGTGAAGAAGGTAAAAATTCGGGTGAGGAAGAATTGAAAGACATCTTC
AGGCTATTTGATAAGAACGGCGATAATGTTTTAGACTGGTCTGAGATAAGGGATGCTTTA
ATGGCGGTTAATGCGGAGCCTCCGGTACAGAATTGGGAAATCGACGAACTGTTCAAGGAA
GCAGACAAAAATGGCGATGGCTGCATCGACATTGAAGACTGGTCTGAGATAAGGGATGCT
TTAATGGCGGTTAATGCGGAGCCTCCGGTACAGAATTGGGAAATCGACGAACTGTTCAAG
GAAGCAGACAAAAATGGCGATGGCTGCATCGACATTGAAGAATGGAGCATATGGATGGAT
GGGGTGAAGTGATCAAAACATCGATTGGGGAAAAACAAAACCGATGGAGAAGATGAATTT
CAAACATTTCTCCTCGTGAAATATTCTATTTGGCGTGAATCTATAATTTCATTCAAGGAA
TAGGATGGGAAAATATGGTCAATTCAGTTTGGAGCATTTCTAAGATTTAACATTTGTAAA
GTACTGTAACAAGTTCGTTATTGCAGTGGTAAAGCATGTGGCGGGCCACGCATCGTGCCT
ATAGCGAAATGGTGTGTTGCTTTTGAG
| SUPERFAMILY |
EF-hand-dom_pair (IPR011992) - T[10-199] 6.91E-42 |
| ProSiteProfiles |
EF_hand_dom (IPR002048) - T[15-50] 14.095 - T[51-86] 14.848 - T[91-126] 14.541 - T[133-164] 10.58 - T[174-203] 12.449 |
| CDD |
EF_hand_dom (IPR002048) - T[19-80] 3.6263E-19 - T[133-199] 1.96343E-9 |
| Pfam |
EF_hand_dom (IPR002048) - T[19-80] 1.6E-12 - T[95-121] 4.4E-7 - T[134-194] 2.3E-10 |
| SMART |
EF_hand_dom (IPR002048) - T[19-47] 9.3E-5 - T[55-83] 3.9E-7 - T[95-123] 0.002 - T[133-161] 0.0015 - T[174-202] 6.6E-5 |
| ProSitePatterns |
EF_Hand_1_Ca_BS (IPR018247) - T[28-40] . - T[64-76] . - T[104-116] . - T[142-154] . - T[183-195] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CALM1_HUMAN | 45.638 % | 135 | 1.27E-40 |
| TNNC1_HUMAN | 50.98 % | 138 | 8.44E-42 |
| TNNC2_HUMAN | 56.757 % | 164 | 4.44E-52 |