- Transcript 'Boleac.CG.SB_v3.S297...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S297.g07008.01.t
Possible name(s)
TMED3; TMED7; TMED7-TICAM2
Gene model
Location
S297 [124,454 / 137,070]
Amino acid sequence
Length: 210
>Boleac.CG.SB_v3.S297.g07008.01.p
MESRIWLVYLALVFIPTISANTXLTFELPDNAKQCFYQEIDKDTSVTLEYQVISGGRNDV
DCRIEDPDGLELYKEKKKNYDSHQWTTMKKGVYKVCFSNEFSTITHKVVYFDWQYGEEDP
LLPEMAKATALTQMETSIVTIHEQVNKVIDFQTKFRLREATGRLFAASLSERVQIWSFLQ
MLILFVVAIGQIVILRSLFSDKQTRSRSTT
Nucleotide sequence
Length: 6,279
>Boleac.CG.SB_v3.S297.g07008.01.t
GTGCATTGAGAAGCAATCGCTGTGTTTTGCTGAATTTGATTGAATTGAACGTGAGTGAGA
CAGTCGTCTTCGAGAGGTAGGTTTATCTCATCAAACACATTGTAGGGGAAAACTGCAATG
GAATCGCGTATATGGCTAGTGTACTTGGCATTAGTTTTCATACCGACCATATCTGCTAAC
ACGGANCTAACATTCGAGCTGCCNGACAATGCCAAGCAATGCTTTTATCAAGAGATCGAC
AAAGACACATCAGTAACATTGGAATATCAAGTAATTAGCGGCGGACGAAATGATGTGGAT
TGTAGAATCGAAGATCCTGACGGTTTAGAGCTATACAAGGAAAAGAAAAAGAATTATGAC
AGCCATCAATGGACCACCATGAAAAAAGGTGTCTACAAAGTTTGCTTCAGCAATGAATTT
TCTACCATAACTCACAAAGTTGTGTACTTTGACTGGCAGTATGGAGAAGAAGACCCATTA
TTACCTGAAATGGCAAAAGCGACAGCACTAACACAAATGGAAACCAGCATCGTTACAATT
CATGAACAAGTCAACAAAGTCATTGACTTTCAGACCAAATTTAGACTGAGGGAAGCTACT
GGTCGATTGTTTGCAGCATCCTTAAGCGAAAGAGTCCAAATTTGGTCATTCCTACAAATG
CTCATACTCTTCGTTGTTGCTATTGGACAAATTGTGATTTTGAGAAGTTTATTTAGTGAC
AAACAAACCCGATCTCGGTCGACGACATAATTTTTGACTGTAATGAAGATATTCTTTAAA
GTATAGGTAAATTATCACTGGGCAAAATTAGTGGTCACATCTTACTACTACTGTCATATG
TACTTTGGAAGTATGTTGTGTGACACCTTGTGCATTTGGATCTCTATGATGTTGGCCCAA
CTCTGAGACTGAGAGATGTTTTCAGACTAATTCACCACAGTGTTGAAATTGGAGAATTTT
CAAGATTCATGAGATAGATGGTAGAAAAGATTGTTCGCGGTAGTCGGTATATTGTACTAT
ATATCAGTAAATCAGGCAGTCTGTGCTGTCAAATTCTGTCACCTGAATGTCTGGGTGGCA
CAGTAGCTGATCAACCAGTAGCCATGTCCAGCAGGCCATTTTTTCTCTGTATATATCCAG
GGCTAAATGGATAGGCCTAATTATAGAAATCCATGCCGTGATCGCTAATTGGGATAATGT
GATGACCTCATTTGATTCTTTTAGTAGTCACCATTTGTGAGTGAAAAAAACAAGAAGTTT
CATGCGGGGGCGAATTGTTCAATTTCGGAGCAGATATTCTATATGAGTCTTGGGGCACTG
GGTTGTCAGTTTGAAATTCTTCCGATTTAGAGTTTCCGACCTGTATGTTATAATGTTTGA
TGGTAATCTCATTGAATCAATATTGGTATTTAATATTGTACTCAGTGAAGTTTATACCGT
GAATGTTTTCATCAATTTCCACAATCCTTTATGACGACTGAAGGATTTAGCTAGGCCTGC
TGCATTAGACAAACTTGCTTCCAGTATGGTTCTGTATGTAGACCTGCGTTTTACTGCCTG
TGCCATGACCTGATAAAGGTCTGTATGAGCAATATTTGACAGCAATGCTCGTATGAATTG
GAGCAATATTTGTTTAGTCTGCCGAGGATACCACAATCTTGGGCCTATGCATCATGTTTG
CAGATCAGTGTACTTGGTATGGTATTAGGCTACATACAACATATACATAGCCTGTAGTAA
TGACAATAATATTTTCAAATGCTGATATGACATGTACCGGTAGGCTACTTTCAACTTCTC
GACATGGTTCTGACATAAATTAATAATGCACGTATCTTGTGTCTTCAAAATCCATTTTCT
TCACTAGCCTAGACATATCCATGGTGGTGCTAGTTTTTCACAGTCTGAGTCTCTTGCTCT
GCATCATGCCATTCGATGTTGAATCATGGTGGGTAAGCCCTGGTCTATTGGTTTAGATCT
GTTCCAATTACCCATGTGCAGTTGTGCATACATAGGTTTCCCATGGTTGAAATTAGACTT
GCGTTTCTTGTGGATTCAACTCGATACCGGTACATTTTATGTAAGTTCTATTGAATTTTG
TGCCTCTCTACAAATCATACTGGCATTCTGGAATGTATTTGTTGGTCCTCGTATATGTTT
TTCTTGCTGGTATTTCTATCTATTGACAAAAGATTTCAGCAATGGTATGTTCAATTGTTC
AATGTTTATACCTCCTCAGTTGCCCTCCTAACATGGAGCATTTTAGGTGCCGGTATTGAA
ATTGGAGATGTAGTTATACATATTGGTACTATAACGGTATTCTTGATTTTAGTTTACTTG
ATGAAGCCTGTGATAAGTTACCATCACTTGAATACTTGTTTGCTGAAATTGAACACAAAC
AGTAACGGTCTATAACTACGTGCTAATTACCTAGAATTGAAATGGTCAATGTTGTGTTGG
GTGGCTCTGTTGCTACAGATTCCCCCCCGTTAAGAAGTGCCATGTTGATAGTCACAATCA
CATGACTTCAACAGTACAAGCGATTTGTACTCAGCTCACCACCCACTGTGACAACTGCAT
NTTCTGTGTACAAACCAATATTGAAATATTAGCTGTGGTCCTGCCTGTTACGAGCGCTTT
CAGAACCGCGTACCGGTATAGTTAAAATGCGTTACTGGCTTACCTGTGTATATACATTTT
GTGCAAAAATTCATCTTCGATAGGCCTATATAATAAATATATATATATATATATACATAT
ACAGTATATATATATATATTGTTTTTGTAATTGATAAAAAGTGTTTATTCAAAGCAGGAC
TGTTTAGTATGCTCTTTGATATCAGGAATGTCTAGCTAGACTAGTTTAGACATCCCTGTT
TGATATTCCCAGTTCTAAATGCCAAGATATGGCTAGCTATCCAGTACGACCAAACGGAAA
ACCCAAAACTGAAAATAAGTACCGGTACGCTATTGGCACCCCACCTCTTCTGTTTGGCAT
TTATGAACTTTTGCACGATTGGAATAAGCGATAACCTGATCCGAGAGCATCTAGAACAAG
TCACACCACATGAAGAAATTTTGTGAACACAGAGCTGTTGTCCTTCAAGAGCGAAAATTT
GACTCTCATGTCGAGCTCTGCCTAGAAACATTCACAGTCAAATATTGATAGTGAAATTGT
GAATACCTCCCTAAATTTCATCATTTTTATGCTAGGTNCAGGTGTACAATTTTATGTAGA
AATAGTGTTTAAGGTTTTTCTCAATTGTCAATTGTACAATTAAGTGCTTGTTTACAGAAA
CATTCATTTAGTGTTTTCTAAATGTTGCAGGTCTTGAAACTTTTACAAAATTGTAATTAC
ACAGGATTCTTCCTGAAGAAGCTGTTTTATCAAGATATTCATTAGTATTTTCCTCTATTG
TACTGTTGCATAGGCCTAGAAGTGGGTTGGTTCAGATAAGAGTGGTGTCATTTTGCTCAT
GTGTGTCTCGTATTTTAGACATTTTCAGATATCGGTGTAATGTATGTTACTGAATAGAAT
ACCGGTATTTAAATTATATAAGTTCTCCACTGAAATGTCCGAGTGGGATGATGATGACTT
TGGGGGATTTGAAAGTGCCGATGTTGTGGTTCAGGGTGTAGGTGACACGAAGGATGAAAA
ACAGGATGATGCTGTTCCAGCGGATTCGTCAAGCAGCGTTGGAACTGGTGGTAACGCGCA
GTTGGATATCCTGGATTGGATACTTTCCAACAATGCCAAAACGGATGTTCCTGATACCGG
TATCCTGCCACAATCACCATCAACCTCTCAAAGTTATAATGGTGAAGATGTATCGACTGA
TGGATTTGCTACACCAAAGTTGCAGAATCTGGATCAAGCAGACAATCTAATGCCTACCAT
GGATTCACAAACTGTAGAAACACCGGCTCCATTTGGTGCAGAATCTTTAACAATAAACTG
GTCTAAGGAATTTTCAAGTGCAAAAGAGAACATTGAATCTTTAGCGAAAGATGAGTCGAA
GAAAGCGCAGCTTAGCAATGACACAATCCATAAATTGCAGGCTGAACTTGATGCCGCATT
GATTATGAAGGAACAATCCGAAAAATCATTGGAAGCAACGAAGAAGGAATTGATGGAACT
CACTGTAGCAAAGAAAAATGAGTTGGATGAAAGAGATCGCCAGCTGCAAGAAGAAATTTC
TCAACTGAAACAGCAGCACCAACTTGAATTAACTGAACTTACAAAATTGTCAGAGCAGAT
GATACAAAAGTTGANGAATCAACACTCAGAGATCTGGAAAACAATAGAAAAAGAGAAATC
ATCTGAATGTGAATCAGTTTCTAATTCAATTGTTGAAAAATGCTTGGAACTTATGAATCA
ACAGCATGCACTTTTGTGTAAACAAATTGATGAATCGAGAGAAAAGGATGAAAAAAGAAT
GAAGGAATCTTTTCACAATGAACAAGAAATCCTAAGCAAGAATATGCAAAAGAAGCTGGA
TGAAGGAAAGCAGAATATAGAGGAAGATTTGAAAAAAACTCTAACGGATAATATGGAACA
AGAAGCGAAGAAGTTACAAGAGTTACATTCACNAACGCTGAAGGAAGCAATGACTAAACA
GCAGTCTCATTTTGAAGAAACTTTGCAATCCATGTTGATGCAGGAAAGAGAAAAATTTAC
AGAAACGTTGAAAANGGCCGTTAGTGACGCCCAATCATCAACAGAAAGAGAACTGGAACG
GAGGAGAATGGCTGAAACCAGTCGTATGAAAACTCACAATCTGTCTTTGAAAATGCTGTT
ATCATCAGCACTTCAGCAAGTAGAGCAACAATTTGACTTTGACAACGATGCTAAGGGTGC
AGGAGAAGGAAGCTGATGACTCGTCATCAACCGACTATGCCGTTACATTTCGGTAATGAA
TCGATTCTGTGGTTTGGATAAAGCTTCATCGCAAGGGTTTGCTTATCGCAGCGGCGTTTA
GCGAGATCTCAATTGTACACGTCTTCCGAGATTGGGTGGGTATTTNAGTAGCAATTCTAT
TGAGAATGAGATTTTTATGTATAGCACGCAGCTCGTTTTATGCATCCCTCCCTATTAGTT
TTATTTCCTCCTGCTGTTTCTTGACCATATCAACATACTTATGCATATCTCTGGTAACTG
TATTGTGACTGTACTCTATACTGTAGGCTACATATAAATCTACGGTACCTAATATAAAAT
TCAATAGCTCTGGACGTGGGCAGTGTCGTACCCACGGAGAGGCGAGCATATCGAATGCCA
TGGGTGCCACTTTCCGGGGGCGAAAAATTTCTCCGCAAACCAAATTATAGCAACACACTT
CTGGGGTTGGGGAGGGGAGTTGTCCGCGAACCAATTTTTGGTAACACTATCCGTCACTAT
ACTGACCAAAAAGAGGCGATGATCCGCAAATAAAACCGCTTTGTCAATCGTCCACGTTTA
TTGAAAACAAAATACGTGCAAGAACGCGAACGCATTTCGTTTATTTGCTAACAAAGCGAT
CATCATCTATAGTTACGACGGCTTTTGCGATTACATTATGTATTCTTTAATGCACTGACA
AATGCTACATTATATTCAACTCGATTTATCCATTCTTTGATATTTCACATTAACGGGTAT
AATCCAGCTACTAATGAAGCAGTATCTAACCACTATCTTTCAGTAGTGCACTGGGTCAGC
GTATTTGTCGCTGGTGCAAGCGTGCGGTGCCGTGACTCTTCCGGAGATATCCATAGACTA
GTTTAGACATCCGTGGACATCACGGCAGTCCAACTAAGTGAAGTAGACCCGATTAGTCAA
TTTTCCGCGTCCTAATTGACTATGGTTACCAGACGTTCGGATTTTTCTAGATAGAAAATG
AGTGTCCGGATGTTTAGCTGTTAGGGACATGGGTAAAAATAGTGCCGGAGGCAGACAAAT
TTTGACTTCTTCGTGTTAGTTTAATATGATGTTCGTGCGATCCCTTACAGTAGATTGTCG
CGTTATGAACACCATGAACTTTACACATGATAATCGATCTATTGCTGTATGATAATATTG
ACACGATATGGTGAGCGACGAATGAAAATGCGGATATGAAGTCATTTCGCTACTGAAAGG
CTTTTGAGTGATCTTTTCTTGCGTCTTCGGGAAGATTTCATCGTCGAGTCAGGGTTGTTA
TAGATATTCAACCTGCTATCCTCCCTTTCAAATTGAATGAATCTTGGTCCGGTGTGGCTG
TCCTTCCGACTGGTTCAGGTCTAATACTAGGCAGTGGCG
| PANTHER |
TMED7 (IPR015718) - T[8-206] 2.0E-81 |
| PANTHER |
TMP21-related (IPR015720) - T[8-206] 2.0E-81 |
| SMART |
GOLD_dom (IPR009038) - T[23-200] 1.8E-63 |
| Pfam |
GOLD_dom (IPR009038) - T[24-199] 1.2E-46 |
| SUPERFAMILY |
GOLD_dom_sf (IPR036598) - T[32-125] 8.24E-21 |
| ProSiteProfiles |
GOLD_dom (IPR009038) - T[33-115] 19.197 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TMED7_HUMAN | 59.474 % | 243 | 3.23E-82 |
| TMED3_HUMAN | 54.301 % | 218 | 1.67E-72 |
| TMED1_HUMAN | 33.333 % | 95.9 | 1.84E-24 |