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TRANSCRIPT CARD

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  1. Clone 'cien132359'
  2. Transcript 'Boleac.CG.SB_v3.S2.g...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S2.g04546.01.t

Possible name(s)

CALM1; CALM3; TNNC2

Location

S2 [417,224 / 417,996]

Sequences

Amino acid sequence

Length: 161

>Boleac.CG.SB_v3.S2.g04546.01.p
MGNLLSYPLGEENVTYHRPCDYNAFGERKQDVKKEENEIDLLHRSHCEEIFAQRRSSKMR
KTFLTDVSNEDYAKRFPRWSSEDIGDYKIQFEIFDLNRDGVIDFKEMNSVLDEFGEFSDP
EDRRRCFTEMDVDDSGTIDFEEFLQVMVKKRFEDGFGFGQT

Nucleotide sequence

Length: 486

>Boleac.CG.SB_v3.S2.g04546.01.t
ATGGGAAATCTGTTATCGTACCCCCTGGGTGAAGAAAACGTCACCTATCACAGGCCTTGC
GACTACAATGCTTTTGGAGAAAGAAAACAAGACGTTAAAAAAGAAGAAAACGAAATAGAT
CTACTTCACCGAAGTCATTGCGAAGAAATATTCGCGCAAAGGCGAAGCAGCAAAATGCGG
AAGACGTTTCTTACCGACGTATCGAATGAAGACTATGCGAAAAGATTTCCACGATGGTCA
TCAGAAGACATAGGAGACTACAAAATACAATTTGAAATTTTTGATCTGAATCGTGATGGA
GTTATCGACTTCAAAGAAATGAATTCAGTGCTTGATGAATTTGGGGAATTCAGTGATCCT
GAAGACCGCCGCAGGTGCTTCACTGAAATGGATGTCGATGACTCGGGCACAATCGATTTT
GAGGAATTCTTGCAGGTCATGGTCAAGAAACGCTTCGAAGATGGATTCGGCTTCGGCCAA
ACGTAA

InterProScan

SUPERFAMILY
EF-hand-dom_pair (IPR011992) - T[78-151] 1.66E-16
ProSiteProfiles
EF_hand_dom (IPR002048) - T[82-117] 12.17 - T[118-153] 12.756
SMART
EF_hand_dom (IPR002048) - T[86-114] 2.6 - T[122-150] 0.0016
Pfam
EF_hand_dom (IPR002048) - T[88-147] 1.6E-8
CDD
EF_hand_dom (IPR002048) - T[91-147] 7.33915E-12
ProSitePatterns
EF_Hand_1_Ca_BS (IPR018247) - T[95-107] . - T[131-143] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value