- Transcript 'Moocul.CG.ELv1_2.S11...' >
- Transcript 'Moocul.CG.ELv1_2.S73...' >
- Transcript 'Boleac.CG.SB_v3.S2.g...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S2.g04608.01.t
Possible name(s)
CCT4; CCT7; TCP1
Gene model
Location
S2 [962,970 / 969,437]
Amino acid sequence
Length: 540
>Boleac.CG.SB_v3.S2.g04608.01.p
MMQPQIILLKEGTDTSQGIPQLVSNINACQVVAEAIRTTLGPLGMDKLIVENNGKSTISN
DGATILKLLDIIHPAAKTLVDISRSQDAEVGDGTTTVTLLAAELLKQVKQFVEDGVHPQV
IIRAYRKATLLAVDKIQEIQVTIRKDDTTEWRSLLEKCAKTALNSKLVAAYKDFFGPMVV
DAVSMLDDLLPLNMIGIKKVSGGALSDSKLVAGVAFKKTFSYAGFEMQPKKYSNPKIALL
NVELELKSEKENAEIRLDNVADYQAVVDAEWSILYDKLDAICQSGAKVVLSRLPIGDVAT
QYFADRDMFCAGRVAEEDLKRTMKACGGSIQTSVQSLTPDVLGTCEIFDEEQVGGERYNF
FRGCPQASTCTLLIRGGTEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSRHL
RDHSRTIKGKQQLLIAAYAKALEIIPRQLCDNAGFDATNILNKLRQAHATGNKWYGVDIN
KEDVSDNFESYVWEPSLVKINALTAASEAACLILSVDETIRNPRSSVDAAPAGRGRGRPR
Nucleotide sequence
Length: 1,837
>Boleac.CG.SB_v3.S2.g04608.01.t
TTGGGCTCGGGCGTGCGAAAAATAAGATCGACGGTTTTTGTTAACGGAATCAGCGGACGG
AATGATGCAACCCCAGATTATCCTACTGAAGGAAGGGACTGATACCTCCCAAGGTATTCC
CCAGCTCGTAAGCAACATCAATGCCTGCCAAGTAGTCGCGGAAGCCATCAGAACCACGTT
GGGACCTCTCGGAATGGACAAGCTTATTGTGGAAAACAATGGCAAATCTACNATTTCAAA
TGACGGGGCAACAATTTTGAAGCTGCTTGATATTATTCATCCAGCTGCTAAAACGCTGGT
CGACATTTCACGATCACAGGATGCAGAGGTTGGAGATGGTACTACGACAGTAACACTTCT
TGCAGCTGAGCTTCTGAAGCAGGTCAAACAGTTTGTCGAAGACGGAGTGCACCCACAGGT
AATAATCCGAGCGTACAGAAAGGCAACACTCTTGGCTGTAGATAAAATTCAAGAAATTCA
AGTTACAATTCGTAAAGATGATACAACAGAATGGAGGTCATTGTTGGAAAAATGCGCGAA
GACTGCCTTGAATTCAAAACTGGTTGCTGCATACAAAGATTTTTTCGGTCCAATGGTTGT
CGATGCAGTGTCAATGCTTGATGATTTATTGCCTTTGAATATGATCGGGATCAAGAAAGT
TTCTGGCGGAGCCCTCAGTGATTCCAAACTTGTCGCTGGCGTCGCTTTCAAAAAGACATT
TTCATATGCTGGATTTGAAATGCAGCCGAAGAAGTACAGCAATCCAAAAATAGCCTTGTT
AAATGTCGAACTTGAGCTCAAGTCGGAAAAGGAGAATGCTGAGATACGACTTGACAATGT
TGCTGATTATCAAGCTGTGGTTGACGCGGAATGGTCTATTTTATATGACAAATTGGATGC
GATATGTCAGAGCGGTGCGAAGGTTGTCCTCAGTAGACTTCCCATCGGTGATGTTGCAAC
ACAGTATTTTGCGGATAGAGACATGTTTTGTGCAGGCCGGGTTGCTGAAGAAGATCTCAA
GCGAACAATGAAGGCATGCGGAGGATCTATTCAGACATCAGTACAAAGCTTAACTCCAGA
CGTTCTTGGAACATGTGAAATTTTCGATGAAGAACAAGTCGGTGGTGAGAGATACAACTT
CTTCCGGGGTTGTCCACAAGCTTCGACATGTACTCTACTCATCCGTGGTGGAACAGAGCA
GTTTATGGAAGAAACTGAGAGATCTCTTCATGATGCCATTATGATTGTTAGAAGAGCAAT
TAAGAATGATTCTGTAGTTGCCGGTGGTGGTGCTATTGAAATGGAATTGAGCAGGCATTT
GAGAGATCACTCACGAACTATAAAGGGAAAGCAACAGTTGTTAATTGCCGCCTATGCAAA
GGCTCTTGAGATAATCCCAAGACAACTCTGTGATAACGCCGGATTCGATGCCACAAACAT
ATTGAATAAGTTAAGACAAGCCCATGCAACTGGAAACAAATGGTATGGGGTTGATATCAA
CAAAGAAGATGTGTCTGATAACTTTGAGTCTTACGTCTGGGAACCGTCCTTAGTCAAGAT
AAATGCTTTGACTGCAGCTTCGGAGGCTGCGTGTCTTATTCTTTCTGTTGATGAGACAAT
CCGTAACCCCAGATCTAGTGTTGACGCAGCTCCTGCTGGGCGTGGACGTGGAAGACCACG
ATAGATCTCATCATTTGCTCACAGGGAATGGTTGAATTCTCTGTGGAGTTCCAAGTTGCT
AAAATTTATCTTTCAGCGTATTGCTGCAAACGTCTCGAATGTAGTCAGACTGTTTTGTAC
CTTTTGCATGTCTATCCGTTCATTTCTACGTGTGGTT
| TIGRFAM |
Chap_CCT_eta (IPR012720) - T[3-525] 3.0E-268 |
| CDD |
Chap_CCT_eta (IPR012720) - T[5-525] 0.0 |
| PANTHER |
Chap_CCT_eta (IPR012720) - T[11-526] 2.2E-211 |
| PANTHER |
Cpn60/TCP-1 (IPR002423) - T[11-526] 2.2E-211 |
| SUPERFAMILY |
GROEL-like_equatorial_sf (IPR027413) - T[15-143] 4.58E-87 - T[403-522] 4.58E-87 |
| Gene3D |
GROEL-like_equatorial_sf (IPR027413) - T[25-143] 7.8E-187 - T[404-520] 7.8E-187 |
| Pfam |
Cpn60/TCP-1 (IPR002423) - T[32-522] 3.5E-161 |
| PRINTS |
Chaperone_TCP-1 (IPR017998) - T[34-50] 1.4E-31 - T[56-74] 1.4E-31 - T[86-105] 1.4E-31 - T[371-393] 1.4E-31 - T[405-417] 1.4E-31 |
| ProSitePatterns |
Chaperonin_TCP-1_CS (IPR002194) - T[37-49] . - T[58-74] . - T[86-94] . |
| Gene3D |
TCP-1-like_intermed_sf (IPR027410) - T[144-212] 7.8E-187 - T[368-403] 7.8E-187 |
| SUPERFAMILY |
TCP-1-like_intermed_sf (IPR027410) - T[152-211] 3.66E-26 - T[366-402] 3.66E-26 |
| SUPERFAMILY |
GroEL-like_apical_dom_sf (IPR027409) - T[207-376] 5.23E-47 |
| Gene3D |
GroEL-like_apical_dom_sf (IPR027409) - T[213-367] 7.8E-187 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TCPA_HUMAN | 34.451 % | 304 | 1.18E-96 |
| TCPH_HUMAN | 79.55 % | 893 | 0 |
| TCPD_HUMAN | 33.399 % | 291 | 8.04E-92 |