Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Boleac.CG.SB_v3.S39....' > 
  2. Transcript 'Moocci.CG.ELv1_2.S10...' > 
  3. Clone 'ma313k11' > 
  4. Transcript 'Moocci.CG.ELv1_2.S61...' > 
  5. Transcript 'Boleac.CG.SB_v3.S34....'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S34.g07989.01.t

Possible name(s)

DST; SYNE1; SYNE3

Gene model

Boleac.CG.SB_v3.S34.g07989

Location

S34 [32,448 / 38,617]

Sequences

Amino acid sequence

Length: 616

>Boleac.CG.SB_v3.S34.g07989.01.p
EIHDKLSGERDNVESAKEHLNTLCRKYQTNELDAVQEKVGTLTTTYDDVYKLSVNVVDAL
EGHLDDEFHSAVKSFYAFFRAGKEILSDCSDTSADIPVLEGRLQKLQSFAAKVDDGQSKL
NAAVEAGNHCIEHLPRSIESVKGQITNMKDDWLKFLAQLDDVKIQLQSSLSGLKSLEENR
KDLAAXLKEIEKKLREEDDLDEGLEXKIKRFERIEAITKELSSKSHQIEMLLQQAHELVE
GDSSQSAGARKAHQLITHYHGIMKKCKERLRECEQIVADHRQYEESYHVADDWIQSAMTR
LDTCLMMVAVSKSSDDVETGLNAAQETLQELTLEKQEGEVKLNVALGKGERAMAKTIMAG
KDNMKKDLNELKNSYEEFIEKLSDCKTKLEQKLLDWTEYSQARDELSSWLSENEAVLSGS
LAPAVDLKDKVAQFEKYKLILQDVESHKETVDVLNEKALNLDQDEIKDMLQQYNLVLSLA
KERFNHLDSCVRRHESYYEAVQDFCGWINSAKEELNRWADLSGDKDVLQKKLNKILALKA
SRSHGRQKLDTATEIGEQVIENTAETGQIVIKTELASLKEEWRSWDRGMTESEIALQSKL
NQLLDYEKSYGIEKTA

Nucleotide sequence

Length: 1,848

>Boleac.CG.SB_v3.S34.g07989.01.t
GAGATTCATGACAAACTATCCGGTGAGCGAGACAACGTTGAATCTGCGAAAGAACATCTA
AACACTCTCTGTCGCAAATATCAAACAAATGAACTCGATGCCGTCCAGGAAAAAGTGGGA
ACTTTAACAACGACATATGATGACGTTTACAAGCTGTCCGTCAACGTTGTTGATGCGCTG
GAGGGTCATCTCGATGATGAATTCCATTCTGCAGTGAAATCGTTCTATGCTTTCTTTCGA
GCTGGCAAAGAAATCTTATCTGATTGTTCTGATACTTCAGCGGATATCCCTGTTTTGGAG
GGCCGACTCCAGAAACTTCAAAGCTTTGCTGCAAAAGTTGATGATGGTCAATCAAAATTG
AATGCGGCTGTCGAAGCAGGAAACCACTGCATCGAACATCTTCCTCGAAGCATCGAATCT
GTGAAAGGACAAATCACAAACATGAAGGATGACTGGCTGAAATTTTTGGCACAACTAGAT
GATGTTAAAATCCAACTGCAGTCATCATTGTCTGGTTTGAAATCATTGGAAGAGAATCGA
AAAGATCTCGCTGCTNGGTTGAAAGAGATCGAAAAGAAATTGAGGGAGGAAGACGATCTT
GACGAGGGATTAGAAGANAAAATTAAAAGATTTGAGAGAATTGAGGCAATCACCAAAGAA
CTCAGCAGCAAGTCTCATCAGATTGAAATGCTTCTCCAACAAGCCCATGAATTGGTGGAA
GGGGACTCATCTCAAAGTGCAGGGGCGAGAAAAGCCCATCAACTTATCACCCACTACCAT
GGAATCATGAAAAAATGCAAGGAGCGCCTTCGAGAATGTGAGCAGATTGTTGCTGACCAT
CGTCAATACGAAGAGTCTTATCATGTCGCGGATGACTGGATTCAATCAGCCATGACAAGA
CTTGACACTTGTCTGATGATGGTGGCTGTATCAAAAAGTAGTGACGATGTGGAAACCGGA
TTGAACGCAGCTCAAGAAACGCTTCAAGAATTGACTCTCGAAAAGCAGGAGGGCGAAGTA
AAACTGAATGTGGCTCTTGGCAAAGGAGAACGTGCAATGGCTAAAACGATAATGGCAGGA
AAAGACAACATGAAAAAGGATCTTAACGAATTGAAAAACAGTTACGAAGAATTCATCGAG
AAATTGTCAGACTGCAAGACGAAACTAGAACAAAAATTATTGGACTGGACCGAATATTCT
CAAGCTCGTGATGAATTATCGTCATGGTTGAGTGAGAATGAAGCTGTTCTATCGGGCTCT
TTAGCTCCAGCAGTGGACCTTAAAGATAAAGTGGCACAATTTGAAAAGTACAAGTTGATT
TTGCAAGACGTGGAATCTCACAAAGAGACTGTGGACGTTTTGAACGAAAAAGCTCTCAAT
CTTGATCAGGATGAAATCAAGGACATGCTACAACAGTACAATCTTGTGTTATCTCTGGCA
AAGGAGCGGTTTAATCACCTTGATTCTTGTGTTCGACGTCATGAAAGTTATTATGAAGCT
GTCCAAGACTTTTGCGGCTGGATCAATTCTGCAAAGGAAGAACTGAACCGATGGGCAGAT
TTGTCAGGGGACAAGGATGTTTTGCAGAAGAAGTTGAATAAAATATTGGCTTTGAAAGCG
TCACGCAGTCATGGACGACAGAAACTGGACACTGCCACTGAAATTGGAGAGCAAGTGATT
GAAAATACAGCAGAAACGGGGCAGATCGTCATCAAAACTGAACTAGCAAGTTTGAAGGAA
GAGTGGAGATCATGGGATCGGGGAATGACCGAATCAGAAATAGCACTCCAATCAAAACTC
AATCAACTGTTGGACTATGAAAAAAGCTATGGTATCGAGAAAACTGCT

InterProScan

PANTHER
SYNE1 (IPR030265) - T[1-607] 9.0E-118
SMART
Spectrin/alpha-actinin (IPR018159) - T[76-167] 0.17 - T[174-274] 2.2 - T[281-390] 3.5 - T[397-488] 0.23 - T[495-597] 0.12

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SYNE1_HUMAN 28.892 % 265 2.95E-76
DYST_HUMAN 21.596 % 90.5 1.24E-18
SYNE3_HUMAN 26.19 % 86.3 1.77E-17