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- Transcript 'Boleac.CG.SB_v3.S34....'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S34.g08008.01.t
Possible name(s)
CLCN6; CLCN7; TMEM184C
Gene model
Location
S34 [284,125 / 289,988]
Amino acid sequence
Length: 1,124
>Boleac.CG.SB_v3.S34.g08008.01.p
MSYDDTSILVQNEVTEYDNDCNGVENIAPIIVKPEKASWRRQSVKQVEALDYDEIENXLY
IKEENETSPKELTVIGIQRWLICIVIGISTGVVAVIIDISIDQLATAKMSFLQKYIKSGV
QNGTLAQPLFMWMGINTSLVAFASILTAYFAPVAAGSGIPQIKCYLNGVKVPEVVRMKTL
ITKVTGIIASVCGGLAVGKEGPMVHSGAVLAAGISQGRSITARLSTPFFTHFRNDREKRD
FVCAGAAAGVSAAFGAPVGGVLFSLEEAASFWNQALTWRIFLCSILSSYTLNSLQSLYHG
HPGDLAYPGLINFGKFEGTYALQDLVIFFLMGALGGILGAFFNMLNIHIMKFRVAYITKR
HLHVLEACIVAMVCGMIAFTMMYVNKECRPLGQDPMDLQYFCSDGEYNVMATLSFTTPES
AVKSLFHDPLGAYSVRTLLTFVIPYFFLACWTYGLKVPSGLFIPSLLIGAAWGRLVGVIL
NSVMAESDWTKDIEKYSLIGAAAQLGGTVRMTISLTVILIEATGNISYSLPLMAVLLIAK
FVGDRFNTGLYDMHIDLDKVPVLEWEPPPLSGRFKAKEIMFHPPITLNLRCRVKDVVDNL
SKVGSNHGGYPVIDDKGKFRGVILRSQLLILVKYKAFLEREASGPLSLSVFRDSYPRFYS
INLLNVSAAERELHIDLEPYVNPSPYVCHEDSSFPRIFRLFRALGLRHLVVVNDDYHVVG
IVTRKDLYKFGEHRDSINKCRSSIMDEVEEHDSPSRSTRITLRGWKSWIRPVVLVIYIIL
LLVTVPLVAVHLEWNXTKPKRETWLIAMIFVIFTIPISFWTILQHLVYYTQPELQKHIIR
ILWMVPIYSIXSLIAIIXPDXAIYFDTARECYEAYVIYNLMAYLLNYLSREYELAGTLGA
KSQQKHLFPFCCLSPWPMGGIFIERCKQGVLQYTIIRPITTIVALICELSGRYHEGNFSP
AYAWVWIVFINNASQIWAMYCLLLFYMATREELKPIHPVSKLWCVKLVVFASFWQAVAIA
IIVQVIPMWDVSDVRRDVADRVREVGERVIPSRPQWLRTNKSGFVDDGDKYNENXSLLTP
SSSDGEMANILGYRNGIHSYDSHNNVSDILGANNEEAGDPDLRE
Nucleotide sequence
Length: 3,375
>Boleac.CG.SB_v3.S34.g08008.01.t
ATGTCGTATGACGACACGTCTATCCTCGTCCAGAATGAGGTAACCGAGTATGACAATGAC
TGTAATGGGGTCGAGAATATCGCTCCAATAATCGTCAAGCCCGAAAAAGCGAGTTGGAGA
CGGCAGAGTGTGAAGCAGGTCGAGGCTCTTGATTATGATGAAATAGAGAATGANCTCTAC
ATCAAAGAAGAAAATGAAACGTCACCGAAAGAGCTAACTGTTATAGGCATCCAAAGATGG
TTAATTTGCATAGTTATTGGGATATCNACTGGGGTTGTTGCTGTGATAATAGACATTTCG
ATTGACCAACTTGCTACAGCCAAAATGTCCTTTCTTCAAAAATACATCAAGAGTGGTGTG
CAGAATGGAACGCTGGCACAACCTCTTTTCATGTGGATGGGTATTAATACCAGTTTGGTA
GCGTTTGCTTCAATTTTAACGGCATATTTTGCTCCGGTTGCTGCTGGAAGTGGAATTCCT
CAGATCAAATGTTACCTCAATGGTGTGAAAGTCCCTGAAGTTGTAAGGATGAAGACCTTG
ATTACGAAAGTAACTGGGATTATAGCCTCTGTATGTGGCGGTCTTGCTGTCGGCAAAGAA
GGTCCTATGGTACATTCAGGAGCAGTTCTCGCTGCAGGAATATCTCAAGGACGTTCGATC
ACTGCTCGGTTGTCAACACCATTTTTTACACATTTTCGAAATGATAGAGAAAAAAGGGAT
TTTGTTTGTGCCGGTGCAGCTGCTGGAGTGTCCGCTGCATTTGGAGCGCCTGTTGGTGGT
GTTTTGTTCAGTTTAGAGGAAGCAGCCAGTTTTTGGAACCAAGCGTTGACATGGAGAATA
TTTTTATGCTCCATTCTTTCCAGTTACACATTAAACTCGCTTCAAAGTTTGTATCATGGA
CACCCTGGAGATTTAGCATACCCTGGTCTGATAAATTTCGGAAAGTTTGAAGGAACGTAT
GCATTACAAGACCTCGTTATCTTCTTTTTAATGGGTGCACTTGGTGGAATATTAGGAGCT
TTTTTCAATATGTTGAACATCCATATCATGAAATTCCGTGTTGCCTATATCACGAAGAGA
CATCTCCACGTTTTAGAAGCTTGCATAGTTGCGATGGTTTGTGGCATGATTGCATTTACT
ATGATGTATGTTAACAAGGAGTGTAGACCCTTAGGACAAGATCCTATGGATTTGCAATAT
TTTTGCTCTGATGGAGAGTATAATGTTATGGCGACCTTATCTTTTACCACACCAGAATCA
GCAGTGAAAAGCCTTTTTCATGACCCCCTTGGTGCTTATTCAGTGCGTACCTTGTTGACG
TTTGTCATCCCGTATTTTTTCCTTGCGTGTTGGACTTACGGTTTGAAAGTTCCCAGTGGG
TTGTTCATTCCATCTTTGCTGATTGGAGCTGCTTGGGGGCGTTTGGTNGGTGTGATTTTG
AACTCTGTTATGGCTGAGAGTGATTGGACGAAAGATATTGAAAAATATTCATTGATCGGG
GCTGCGGCGCAATTAGGTGGCACTGTCAGAATGACCATAAGTTTGACCGTTATTTTAATC
GAAGCGACCGGCAATATTTCATACAGTCTTCCTCTTATGGCAGTTCTTTTGATTGCAAAG
TTTGTTGGTGATAGGTTTAATACTGGTTTATATGACATGCACATTGATTTAGACAAAGTC
CCTGTTCTAGAATGGGAACCTCCTCCCCTGTCAGGTCGTTTCAAAGCAAAGGAAATTATG
TTTCACCCTCCGATTACTTTGAACTTGCGCTGTCGTGTTAAAGATGTTGTCGATAATTTG
TCCAAAGTTGGTTCAAATCATGGCGGGTATCCTGTCATTGATGACAAGGGAAAATTCCGC
GGTGTTATATTGCGATCTCAGCTGCTGATTTTGGTTAAGTATAAAGCATTCCTTGAGAGA
GAGGCTTCAGGTCCTTTGTCTCTATCCGTTTTCCGTGATAGTTACCCTCGGTTTTATAGC
ATCAATTTGTTGAACGTCTCGGCTGCAGAACGAGAGTTGCACATTGATCTTGAACCGTAT
GTTAACCCGTCCCCGTACGTCTGTCATGAGGATTCGTCGTTTCCTCGAATTTTTAGATTG
TTTCGAGCGTTAGGTTTGCGACATCTAGTAGTTGTCAATGATGATTATCATGTTGTGGGA
ATTGTGACTCGTAAAGATTTATATAAGTTTGGTGAACACCGTGACAGTATTAACAAATGT
AGATCTTCAATTATGGATGAGGTGGAGGAACACGATTCGCCGTCCCGCTCAACACGGATC
ACTCTGAGAGGATGGAAAAGTTGGATACGACCTGTCGTGTTGGTGATTTATATCATACTG
TTGCTAGTGACAGTGCCTCTAGTGGCAGTTCATTTGGAATGGAATAANACAAAGCCGAAA
AGGGAAACATGGCTCATCGCGATGATTTTTGTGATTTTTACAATACCTATTTCGTTTTGG
ACAATATTGCAGCATCTTGTATATTATACACAACCAGAACTTCAGAAACACATCATAAGA
ATCTTATGGATGGTGCCAATCTACTCCATCGANTCTCTAATCGCGATTATACNCCCGGAT
AANGCAATCTACTTTGATACGGCGCGAGAGTGTTACGAAGCCTACGTCATCTACAATCTG
ATGGCGTATTTGCTCAATTATCTGTCACGGGAATATGAACTAGCCGGTACACTTGGTGCT
AAATCTCAACAAAAGCATTTATTTCCATTCTGTTGTTTGAGCCCGTGGCCAATGGGAGGG
ATATTCATAGAGCGTTGTAAGCAGGGAGTTCTGCAATACACAATAATACGTCCGATTACC
ACAATAGTTGCACTTATATGTGAATTGTCTGGAAGATATCATGAAGGAAATTTCAGTCCT
GCTTATGCTTGGGTTTGGATTGTCTTTATCAACAATGCTTCTCAAATATGGGCGATGTAC
TGTTTGCTGTTGTTTTATATGGCNACTCGCGAAGAGCTAAAGCCAATCCATCCTGTTTCA
AAGCTGTGGTGCGTCAAACTTGTTGTGTTTGCCTCATTCTGGCAGGCTGTGGCGATTGCT
ATCATTGTTCAAGTTATTCCTATGTGGGATGTATCTGATGTAAGACGCGACGTAGCGGAT
CGCGTCCGTGAAGTTGGTGAACGAGTCATACCTTCTCGTCCACAATGGTTGCGCACCAAT
AAAAGTGGTTTCGTCGATGATGGCGACAAATATAATGAAAATNCGAGTCTCTTGACCCCG
TCTTCTTCCGATGGTGAAATGGCGAACATTTTAGGATACAGAAACGGGATACATTCGTAT
GATTCTCATAACAACGTATCTGATATCTTGGGTGCAAATAACGAAGAGGCCGGTGATCCA
GATCTTCGTGAATAA
| Gene3D |
Cl-channel_core (IPR014743) - T[72-565] 1.5E-129 |
| SUPERFAMILY |
Cl-channel_core (IPR014743) - T[74-384] 1.7E-100 - T[415-566] 1.7E-100 |
| Pfam |
Cl-channel_volt-gated (IPR001807) - T[140-544] 1.0E-94 |
| PRINTS |
Cl-channel_volt-gated (IPR001807) - T[152-169] 2.1E-62 - T[183-202] 2.1E-62 - T[247-266] 2.1E-62 - T[457-477] 2.1E-62 - T[494-510] 2.1E-62 - T[512-531] 2.1E-62 - T[550-564] 2.1E-62 |
| Pfam |
CBS_dom (IPR000644) - T[576-631] 2.3E-5 - T[682-730] 1.0E-6 |
| ProSiteProfiles |
CBS_dom (IPR000644) - T[580-640] 10.153 - T[681-737] 11.579 |
| SMART |
CBS_dom (IPR000644) - T[583-633] 0.075 - T[684-732] 1.5E-6 |
| Pfam |
Ostalpha/TMEM184C (IPR005178) - T[804-1026] 3.2E-84 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CLCN6_HUMAN | 39.92 % | 435 | 1.58E-136 |
| CLCN7_HUMAN | 53.835 % | 701 | 0 |
| T184C_HUMAN | 61.654 % | 330 | 1.05E-102 |