Aniseed - Transcript Card

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S389.g08832.01.t

Possible name(s)

SMYD2; TDRD1; ZMYND19

Gene model

Boleac.CG.SB_v3.S389.g08832

Location

S389 [77,956 / 82,759]

Sequences

Amino acid sequence

Length: 228

>Boleac.CG.SB_v3.S389.g08832.01.p
MAGSKICAVKLGRAAGKTKFTILDEESVPLVQKCALEPRIIIDHNGNGTKIYGYIYGSRK
SRCNARKLHEVLWELHVGRIRSGYEVAHRNGITVDNRIDNLFLVSEEDASAKSTPMLLPD
PNSLYYQVLRRIPADPIEESFLELXSMRCYGRXGEIVVDYDRNLCFYECHYPPCSNIESQ
VAEFSVCSHCRQVRYCSTSCQQIDWVTHKKHCCPERRKRRHRSISPER

Nucleotide sequence

Length: 1,912

>Boleac.CG.SB_v3.S389.g08832.01.t
GTTTCGCTGACGCTTTTCAAGATGGCGGGGAGTAAAATATGCGCCGTAAAACTTGGCAGA
GCTGCTGGAAAAACAAAATTCACTATTTTGGACGAAGAAAGCGTCCCCCTTGTTCAAAAA
TGTGCGCTGGAGCCTCGGATAATCATCGATCATAATGGAAACGGAACAAAAATTTATGGA
TATATTTATGGATCGCGTAAAAGTCGATGCAATGCACGGAAACTGCATGAAGTGTTGTGG
GAGCTCCACGTCGGTCGAATTCGATCAGGCTATGAGGTCGCTCACAGAAATGGAATAACA
GTCGACAATCGTATCGACAACCTTTTCCTTGTCAGTGAAGAAGATGCCTCTGCGAAATCC
ACACCTATGCTTTTACCAGACCCCAATTCACTTTATTACCAAGTTCTGAGACGCATTCCT
GCCGACCCAATTGAGGAAAGTTTCCTGGAGCTGAGNTCGATGCGATGTTACGGAAGGAAN
GGAGAAATCGTCGTCGATTATGACCGGAATTTGTGCTTTTATGAATGCCATTATCCTCCG
TGCTCGAATATTGAAAGTCAAGTTGCTGAGTTTTCAGTTTGCAGCCACTGTCGTCAAGTT
CGTTACTGCAGCACCTCGTGTCAGCAAATCGATTGGGTCACTCATAAGAAGCATTGTTGC
CCAGAGCGACGGAAAAGACGACATAGAAGCATTTCCCCTGAGCGTTGAATTGTATATAAT
TCATCTGCTTTTATGATGCAATAATGAGGCGTTACCTCATCTATGGTGATTGTCTTCCAC
CGATATTTCAATCCTTTCTCAAATACTGTGCTTCTGTATTTTTGAGGTCAAAGGTCATGT
GCTGCTCTTACAAAGCCCCATCATGTTTTCAAAATCACCCCTTCCTCGGCTAGCAATGTG
CCCCTACTAAATTTGGTTTTGAGTAGATAAGCTGATTGAGAAGCACAGCCTGCGTGCCAC
GTGGGGGGGGGGGATTTAAATTAATTTGATTTCGTGCAGTTATTGAAAATCCGCGCATAA
TTCTAAATTTTCACTAGAAATCCGCGCAGTTCCGTAAGTTGACGTCAATCGGTGAAAATT
CCCTTCCGATTCAGGGTACAGGGGGGAGGATGTTGGGTCATTAATTGAAATTTATAGTGG
AGTGGAGTGGGGTTGGGGTTTTGTTTTGACCCGTTCACTCTCTCCTGGCTCCCCGTTATC
TGGTTTGCTATTCAGTCCATACTTATGTCCTGACTTTTTCCCAGTCCTTTGTATTCTGTG
TGGGGATGGAGGGTCCGTTTTATGAATGAATGGGGACGTAAATGTTACTTAAAGCATTCA
TTGATTATGGTATTGGTTATTTATTATAATTTTATTTTAGGGGTTTTAATTTTTCAAGAA
TGTCGTTTGGAGTTGTATTCGTCACACATCAGTGAACGTAATTTTAATATTGCGTCATAT
CGTATTGTCACAATGCACTTGTACCATGCTATATGATGTCATGAGTAGAGATGATTCAAA
ATGTTGTGAATAATCTCTAAATGGAGCTGAATTGGTTACGAAAGATGCTTTCTAGTGGTA
CGTACTTGATCACGGAGGTTTTGACAAAATTACAAATTCATAAAGACGCATAATCTTGTC
ATTTGAGCATCACAATCTCAATTTTCATATATACTTGTGTCATCACAATCCTGATTATGA
TGAGCTCCATTTTTTAACTCGACTTTGAATTATGTCCAAATGAGTTTTGTTTCATCTGTT
GATTGTGAGGTCAGAGCTGAATTTCTTCTTCGTTATTATGATGTCATTTTTCCGGATGCC
TATCAGTGTAGGCTTGGTTCTAGATTTTTTGGAATTGGTGCTCGATGTGTGATGTCACAT
AGGATAGTACTGATAGCCGTTTCTTGTGCTGAACTTTGTTGTGCGCTGTTGG

InterProScan

PANTHER	ZMYND19 (IPR032978) - T[7-222] 2.8E-52
Pfam	HNH_nuc (IPR003615) - T[66-109] 1.3E-11
ProSiteProfiles	Znf_MYND (IPR002893) - T[174-212] 10.548
Pfam	Znf_MYND (IPR002893) - T[176-212] 1.6E-6

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
ZMY19_HUMAN	43.162 %	211	2.52E-69