- Transcript 'Boleac.CG.SB_v3.S38....'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S38.g08688.01.t
Possible name(s)
TBX19; TBX21; TBXT
Gene model
Location
S38 [17,246 / 20,790]
Amino acid sequence
Length: 415
>Boleac.CG.SB_v3.S38.g08688.01.p
MSSLSDYARSCDEKVKVTLNDRALWAKFCSFTNEMIVTKSGRRMFPVLKLTASGLEPNSM
WKYVNGEWIPGGKPEPHAPSCVYVHPDSPNFGSHWMKQPVSFNKVKLTNKGNGGNQQIML
NSLHKYEPRVHIVKVGGDSSSQRTLATFSFAETKFIAVTAYQNEEVTSLKIKHNPFAKAF
LDSKDRPENTDNTTFHPPSCSQVQSFNHWSSDGIANDILRNGHSTMPQFQNAYVTASTAS
ASHPYSYQGPTRSCSYRQNRTSPYAISPHRGKLQGFEFGTGNSAHDVVSQSLPYEQLLGG
SFVPCLTESQTSFYNTFSESNSDPNLYSNLCGMDADLHVHQTQPTDSNCDLGNQFIPQTT
GFDLYQCNDVSDIQSNVSIPKDEIINISTEENLIHPATPDYASSSTYSPDVGERG
Nucleotide sequence
Length: 1,248
>Boleac.CG.SB_v3.S38.g08688.01.t
ATGTCATCGCTATCGGATTACGCACGAAGTTGTGACGAAAAGGTTAAAGTTACCTTAAAT
GACCGTGCGTTGTGGGCCAAATTTTGTTCCTTCACAAACGAAATGATCGTGACGAAAAGT
GGAAGAAGAATGTTTCCGGTATTAAAACTCACCGCAAGCGGTCTGGAACCAAACTCAATG
TGGAAATATGTGAACGGTGAATGGATTCCTGGGGGCAAGCCAGAGCCACATGCACCTTCA
TGCGTGTACGTTCATCCCGACTCACCTAATTTCGGATCGCATTGGATGAAACAACCTGTC
AGCTTCAACAAAGTCAAATTGACCAATAAAGGAAACGGAGGAAATCAACAAATCATGCTA
AACTCATTGCATAAATATGAGCCACGCGTTCATATAGTGAAGGTNGGGGGAGATTCATCA
TCGCAGAGGACTCTTGCAACTTTTTCTTTCGCGGAGACCAAATTCATCGCCGTCACCGCT
TATCAAAATGAAGAGGTAACATCGCTGAAAATTAAGCACAATCCGTTTGCAAAAGCCTTC
CTCGACTCGAAGGACAGACCAGAAAACACGGACAATACTACGTTTCATCCACCTTCTTGC
TCTCAAGTGCAATCGTTTAATCATTGGTCCTCGGATGGAATCGCAAATGACATTTTACGA
AACGGACATTCTACAATGCCACAATTTCAAAACGCATACGTGACTGCGAGTACTGCGAGC
GCTTCTCACCCTTACTCCTACCAAGGGCCAACAAGGTCATGTTCTTATCGACAAAACAGG
ACCTCACCATACGCGATATCACCACATCGAGGAAAGCTGCAAGGCTTTGAATTCGGAACT
GGGAACAGTGCTCATGACGTTGTATCTCAATCTCTTCCATATGAACAGCTTCTCGGCGGC
TCATTTGTGCCATGTCTAACAGAATCTCAGACGTCGTTTTACAACACTTTCTCGGAAAGT
AACAGCGATCCCAATTTGTATTCCAATCTTTGCGGAATGGATGCAGATCTACATGTCCAC
CAAACGCAACCAACTGATAGCAATTGTGACCTAGGCAATCAGTTTATCCCGCAAACTACC
GGATTTGATCTGTACCAATGTAACGATGTGTCAGATATTCAATCGAATGTGTCGATTCCG
AAAGACGAAATTATCAATATATCAACTGAAGAAAACCTCATTCATCCCGCAACTCCTGAC
TACGCATCTTCATCAACGTACTCACCTGACGTGGGAGAACGTGGTTAG
| PANTHER |
TF_T-box (IPR001699) - T[10-291] 1.7E-110 |
| SMART |
TF_T-box (IPR001699) - T[14-187] 1.7E-92 |
| CDD |
TF_T-box (IPR001699) - T[14-186] 3.11913E-100 |
| Gene3D |
T-box_sf (IPR036960) - T[14-187] 1.0E-67 |
| SUPERFAMILY |
p53-like_TF_DNA-bd (IPR008967) - T[15-182] 1.99E-65 |
| Pfam |
TF_T-box (IPR001699) - T[17-182] 5.4E-61 |
| ProSiteProfiles |
TF_T-box (IPR001699) - T[19-182] 60.634 |
| ProSitePatterns |
TF_T-box_CS (IPR018186) - T[24-43] . - T[84-102] . |
| PRINTS |
TF_T-box (IPR001699) - T[32-56] 1.2E-21 - T[153-166] 1.2E-21 - T[174-182] 1.2E-21 |
| PRINTS |
TF_Brachyury (IPR002070) - T[63-83] 5.8E-22 - T[124-141] 5.8E-22 - T[178-188] 5.8E-22 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| BRAC_HUMAN | 52.92 % | 278 | 4.98E-90 |
| TBX19_HUMAN | 50.562 % | 258 | 7.45E-82 |
| TBX21_HUMAN | 49.738 % | 179 | 3.63E-51 |