- Transcript 'Boleac.CG.SB_v3.S275...' >
- Transcript 'Moocci.CG.ELv1_2.S46...' >
- Transcript 'Moocul.CG.ELv1_2.S96...' >
- Transcript 'Haaura.CG.MTP2014.S1...' >
- Transcript 'Boleac.CG.SB_v3.S38....'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S38.g08705.01.t
Possible name(s)
NVL; SPATA5; VCP
Gene model
Location
S38 [238,709 / 248,561]
Amino acid sequence
Length: 869
>Boleac.CG.SB_v3.S38.g08705.01.p
MSSLPSFDRRLPGRITAYLSEHQRASSDELTDYLQRKFPGDYGRRKRNAFRIIVRQVHQG
ILEDGTLLKSNDSKSKRRKKTIEKSKDSSSDSDNDEIMVEYTDTNSLNSSMQSMYKKKKR
KSFSAPASPAPAVTYSYVNHGNFPSSEASVENMDHNTEVDFISETNAASVCNEAVLENSK
SETAADTTRVSSNPGRNLTSNVTFSDAFVATESTQQELQRNRQTKKRKKIAKPQDQDIEI
TGEKAKSNLTLEKSSVKFDDIGGNKKTLTELLRLLLHVXHPDFDRNLGVTPPCGVLLHGP
PGCGKSLLADAIAGELDMPMLKVAATEIISGVSGGSEEKIRDIFELATASAPCVIFFDEI
DAITQKREHALKDMERRIVSQLLTCMDGLSKSPLQILVVGATNRPDSIDPALRRDGRFAK
EFCMGIPNERDREDILRVLCKNLKLENNFNFALLARLTPGYVGADLMLLCREATMSAMDR
FLNSVKSNGSENNMEAETQENHPNQESVGLNGEIHEHDSKQNVTSNTVTMREFTYSDYLL
WLRQPALFTDSQYETVCIELSDFKNALPNVQPSAKREGFATVPDVTWDNIGALESIREEL
TMAILAPVRNPKKFSALGLTKPRGILLAGPPGCGKTLLAKAIANESGINFISVKGPELLN
MYVGESEKAVRQCFQRARDSSPCVIFFDEVDSLCPVRIGAESGSTSRVVNQMLTEMDGLN
TRGNVFLMAATNRPDIIDPAVLRPGRIEKTLYVGLPSADDRVKILRTITKNGVKPPINNQ
VSLDAIARDERCARFSGADLSSLVREASENALRDHLSIEHVISQDEEMDDLDIRLSPEHF
EQSWKKVKPSVSAKDEMRYEEMRRNLEML
Nucleotide sequence
Length: 4,295
>Boleac.CG.SB_v3.S38.g08705.01.t
AGCAGCTTAAATTGGTCCAATGTAGATCTAATAGTACTGTCTATCTTCGCTCCGCCTGAC
ATGTCGTCTTTGCCATCATTTGATCGTCGTCTTCCTGGTAGAATAACGGCATATCTTTCT
GAACACCAGCGCGCCTCGTCAGATGAATTGACCGATTATCTTCAACGTAAGTTTCCCGGT
GACTATGGCAGAAGAAAGAGAAACGCTTTCAGGATAATTGTGAGACAGGTTCATCAAGGT
ATTCTTGAAGATGGCACATTGTTGAAATCAAATGATAGCAAATCCAAAAGGCGCAAAAAG
ACCATTGAAAAAAGTAAAGATTCATCTTCAGATTCAGACAATGATGAAATTATGGTTGAG
TACACGGATACAAATTCTCTCAATTCATCCATGCAATCAATGTACAAGAAGAAAAAACGG
AAATCTTTCTCTGCTCCCGCAAGCCCAGCACCAGCAGTAACATATAGTTACGTTAATCAT
GGTAACTTTCCAAGTAGTGAAGCTTCTGTAGAAAATATGGACCACAACACTGAAGTAGAT
TTCATATCAGAAACCAATGCCGCAAGTGTCTGTAATGAGGCGGTGCTAGAGAATTCAAAA
TCAGAGACTGCTGCGGATACAACGCGTGTATCAAGTAACCCTGGGAGGAATTTGACATCT
AACGTCACTTTTTCTGATGCTTTTGTTGCGACCGAATCAACACAGCAGGAGCTGCAGCGT
AATCGACAGACAAAAAAGAGAAAAAAGATTGCCAAACCTCAAGATCAAGATATTGAAATA
ACTGGAGAGAAAGCGAAGTCAAACTTAACACTTGAAAAAAGCAGTGTGAAATTTGATGAT
ATTGGAGGCAATAAGAAGACATTGACTGAATTGCTACGGTTACTGTTACATGTCAANCAT
CCTGACTTTGATAGAAACCTTGGTGTTACCCCTCCATGTGGTGTCTTACTTCACGGACCA
CCAGGNTGTGGTAAGTCATTGTTGGCTGATGCCATTGCGGGCGAGCTGGACATGCCAATG
TTGAAAGTAGCTGCTACTGAAATCATAAGTGGGGTGTCTGGAGGAAGCGAAGAAAAAATC
CGGGATATATTTGAATTGGCAACTGCATCTGCTCCATGTGTTATATTTTTTGATGAAATT
GATGCAATCACGCAGAAGAGAGAACATGCATTGAAAGACATGGAAAGAAGAATTGTATCT
CAGTTACTCACTTGTATGGACGGTCTTAGCAAATCTCCATTGCAAATACTGGTGGTAGGA
GCAACAAATCGCCCAGATTCTATTGATCCCGCCCTTAGAAGAGATGGCAGATTTGCTAAA
GAATTTTGCATGGGAATTCCAAATGAAAGGGACAGAGAGGATATTCTAAGAGTTCTCTGC
AAAAACCTGAAACTTGAAAACAACTTCAACTTCGCACTTTTGGCAAGACTCACACCGGGT
TATGTCGGAGCAGACTTGATGTTATTATGCCGCGAGGCAACCATGTCAGCAATGGACAGA
TTTCTGAATAGTGTAAAATCGAATGGTTCAGAAAACAACATGGAAGCTGAAACCCAAGAA
AACCATCCAAACCAAGAATCTGTGGGTCTGAATGGCGAAATACATGAGCATGATTCTAAA
CAAAATGTGACTTCAAACACTGTTACAATGCGTGAATTTACTTATTCTGACTATTTGCTT
TGGTTACGACAACCAGCTTTATTTACGGATTCTCAATATGAGACTGTATGCATTGAATTA
TCTGATTTTAAAAATGCTCTTCCAAATGTTCAACCTTCTGCAAAGCGTGAGGGGTTTGCT
ACTGTACCAGATGTGACATGGGATAATATTGGAGCTCTGGAAAGTATAAGAGAAGAATTG
ACAATGGCAATACTGGCACCCGTACGAAACCCAAAAAAGTTTTCGGCTCTTGGTCTAACA
AAGCCACGTGGAATTTTACTAGCTGGTCCGCCGGGATGTGGAAAGACATTACTTGCCAAA
GCAATAGCCAATGAATCAGGAATTAATTTCATATCTGTAAAGGGTCCAGAGCTACTCAAT
ATGTATGTTGGTGAAAGTGAAAAGGCAGTCCGTCAGTGCTTTCAAAGAGCCAGAGACTCT
TCACCGTGTGTCATCTTTTTTGATGAGGTGGATTCATTGTGCCCAGTGAGAATTGGTGCA
GAGAGTGGCTCTACATCAAGAGTTGTCAATCAGATGCTGACTGAAATGGATGGCTTGAAT
ACAAGGGGCAACGTTTTTCTTATGGCCGCAACAAATAGACCTGATATCATTGATCCAGCG
GTATTGAGACCTGGAAGAATTGAGAAGACACTCTACGTTGGATTGCCTAGCGCAGATGAT
AGGGTTAAGATTTTGCGAACTATAACTAAAAACGGTGTGAAGCCTCCAATTAACAATCAA
GTGTCCCTTGATGCCATAGCCAGAGATGAAAGATGTGCCAGATTCTCAGGAGCTGATTTG
TCGTCCTTAGTGCGGGAGGCCTCTGAGAATGCGCTTAGGGATCACTTATCTATTGAACAC
GTGATCAGTCAAGATGAAGAAATGGACGACTTGGATATAAGACTTTCACCGGAGCATTTT
GAACAGTCGTGGAAGAAAGTGAAGCCATCCGTTTCAGCTAAAGATGAAATGCGGTATGAG
GAGATGAGAAGGAACCTAGAAATGCTTTGACCTGGTGCACAGATTGATGGCACAATTGTT
GAGGTGATGCCATCAAGTCTGTGAGAGTTGAATAACGGCCACGTCATACCAATGAGTCTA
AAAATGGTATCCACACTGTGGATTCAACAACCGCCCTGCCTGGCACCAGCGCAATATCGT
TGGTGCAGAAAGGCGACAATGGCCCAGAAGAAAATCACTCATGCTAGTNCCTCCCCGCCT
TAATGGCGATAAAACAGAGCCTTTTCTTCCTCTATTCCTGCAATCAGTTGAACTGACTGA
ACCAACACGCATCAAGGGAGTCTGCTTCATTACCCAATGGGTAATACCCTTGCATCGTGT
CCCGAGCTATTTGATTGGAAGTGTTATCATGGCGGGGGGGTTGGTTGTATCCAGTTTGAC
TATTTTCATTAGTATTAGTCCTATCATTATTTGTGCCAAACACTACAGTAGTTGAGAGAT
TACTGTATTATTTTTTCTGCCATGGTACAGATAAACAGGGTTTTCTTTGGAAAGCGACCC
TGCCATCGTGTTAATTGGGATTGAGTGAATTGTTACAATTAGCTGCAATTCACAAAGTTG
GTCTTGTACAGCGGGTGGCANCTTNGTCTGCTACGGTTTTCAGCAACTGAAGCAATGCGT
TAGACCCAAATCCGCTAAATCATTATTACTGCCGACTCTTGGGTTGAAATCGTATGTATT
ACAAACAAAAGGGTATGCGTTGCAGTGGGTGTGCAAAACGTTGAGCTGTTGTGACAAAAT
TAACGCTCATTGGCAATAAATAATTTGAAAATTTTTCTGTGCGGTGTACAACTGTACATG
CAAGCCTATAATATAATACACAGGAGAAACCCCCAACCAAACGGGGTTGTTTGACAACTT
TCTTTTGTTCCGCGACGCTTTACTGGCAGATTTTTCTTCACTTTGCAGTCAGGCCTAGTC
CTACGACGTTCTCAACCATGATTTGCTTCTAGTGTATGGCATTTTCGCGCTTCATAAACT
GATGAACAGGTTGTCGTCCGGCTGTTTCCCTTTCGATAGTCAGCGCTATACCCGCTACGC
CGGTAAACTGCGACATGTGAAAGGCTGAGGGGTGTTTTAGCAAATGTTTACAGTTCCAAG
TCTCTCGATCGCTTGGCTGGAGAGGAAGGGTCTGAGGTGGAACCGCCAGATCCAGCAGTC
GACGCGGTTCTGTTCTTCCAGCAAACCTTCAGTAATTTCCTTGTAATGAAGTGNCGGGTT
GCTCTACGCATTTTTCTAAAAATAATTGCCGATGTGACGATAAGAAACAGTGTATAAGCA
GTTGCCAATTCTTACGCTGAAGCTACGTTATAGAATATAGGGTTGAGGCATTCTGACAGG
CGTAGAAGGATGTACGCGACCATCCCGAAGTTCCAGTCGTTGATCTTCTCTTGCAACGTA
CTCGACTTTACGTTGGTGGTGTAAAATGTGTAGGCTGTGGACAGGAACAAAAGGTGATAT
CATCGTAAGGAAATTGNAAACAGGTAAAATCATTTTCGGATTGTTGAACATATAATATAA
TATAATCCCAGGCAATTATGATCATGTGTATTGTGTAGGCGTAGCGTGTAGGGGTAAGGA
CTTGAATCAACCCTGCCTAAAGCCCCTCGACTCTT
| Gene3D |
NLV2_N_sf (IPR038100) - T[2-68] 7.7E-11 |
| Pfam |
NVL2_nucleolin-bd (IPR031996) - T[8-64] 5.8E-13 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[255-480] 3.26E-57 - T[583-862] 1.01E-64 |
| SMART |
AAA+_ATPase (IPR003593) - T[291-428] 3.3E-17 - T[621-757] 7.9E-21 |
| Pfam |
ATPase_AAA_core (IPR003959) - T[295-423] 5.4E-40 - T[625-754] 1.9E-45 |
| ProSitePatterns |
ATPase_AAA_CS (IPR003960) - T[396-414] . - T[725-743] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SPAT5_HUMAN | 38.374 % | 404 | 3.79E-127 |
| TERA_HUMAN | 41.467 % | 441 | 2.0E-142 |
| NVL_HUMAN | 50.114 % | 796 | 0 |