- Transcript 'KH2012:KH.L8.11.v1.A...' >
- Transcript 'Boleac.CG.SB_v3.S113...' >
- Transcript 'KH2012:KH.C9.606.v1....' >
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- Transcript 'Boleac.CG.SB_v3.S39....'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S39.g08854.01.t
Possible name(s)
NONO; PSPC1; SFPQ
Gene model
Location
S39 [135,783 / 144,991]
Amino acid sequence
Length: 493
>Boleac.CG.SB_v3.S39.g08854.01.p
MPANYRPRGAGPGGRYYNNGGYNGPRPSYHPPPHRPAPGNMPRPMNQSPQKQNKPAPKNE
SAEVSKPTPIKQETKVQKVEPTIDASTGTNDSASKIKKFTQRSRLFVGNMPSDVTDEEFK
ELFKKYGEISETFVHASKGFGFVRLDTRANAERAKLELNGHTIKGRDLKIRFASHGAALS
LKHLSPYVSNELLESAFARFGPVERAVVIADDRGRSTGRGIVEFARKTSATKALGQISEG
CFLLTSSPQAIVAKPLDQEDTEDGLPEKNIHKTQQYTQEREAPPRFSLPGTFEHEFALRW
KALDEMERQQQEQLNKNIAGAREKLEIEMENAIHEHKTMLMKQELIRRQEELSRIEDQRK
RDLERRKQLEYEREDRHNKELEALAKRQEILRAQIEGALVGHPQWLVTAQWITWEVDKAA
WDQHRVAKPDLNRVRVVDLFHLPHSLLVLQAVKDSAPGKDVDILEVQWISITFKNVADTE
KRGDLDQCRNVFK
Nucleotide sequence
Length: 2,260
>Boleac.CG.SB_v3.S39.g08854.01.t
TTTTATAGATTTCTCAAGTTGAATATTATAGGCCTATCTAATAATAAAATGCCAGCAAAT
TATAGACCACGTGGTGCTGGACCTGGTGGTCGGTATTACAATAACGGAGGTTACAATGGG
CCACGACCATCATATCACCCACCTCCACACAGGCCTGCGCCAGGCAATATGCCAAGACCT
ATGAATCAATCGCCACAGAAGCAGAATAAACCTGCCCCAAAGAATGAAAGCGCAGAAGTG
TCAAAGCCAACTCCCATTAAACAAGAGACAAAGGTACAAAAAGTGGAACCAACAATTGAT
GCAAGCACTGGCACAAATGACTCTGCTAGCAAAATAAAGAAATTCACTCAGCGGAGTCGC
CTGTTTGTTGGGAACATGCCATCGGATGTCACCGATGAGGAATTTAAAGAATTATTCAAG
AAATACGGAGAGATCTCAGAAACATTTGTACACGCAAGCAAAGGATTCGGTTTTGTTCGT
TTGGACACAAGAGCCAACGCTGAAAGAGCCAAGCTTGAATTAAACGGNCACACCATCAAA
GGTCGTGATTTGAAGATCCGCTTTGCGTCACACGGAGCAGCATTGAGCTTGAAGCATTTG
TCGCCTTATGTGTCCAATGAATTGCTAGAAAGTGCCTTTGCGAGATTTGGCCCTGTTGAG
CGGGCGGTTGTTATTGCCGATGACCGAGGAAGATCAACAGGACGAGGAATCGTCGAATTT
GCAAGGAAGACCTCTGCCACCAAAGCACTCGGTCAGATATCGGAGGGTTGTTTTCTTCTG
ACGTCATCACCACAAGCTATTGTGGCAAAGCCTCTCGATCAAGAAGACACAGAAGATGGC
CTTCCTGAAAAGAACATTCACAAAACTCAGCAATATACCCAAGAAAGAGAAGCGCCACCG
CGGTTTTCTCTCCCTGGTACATTCGAGCATGAGTTTGCTCTGAGATGGAAAGCTCTTGAT
GAGATGGAGCGGCAGCAACAAGAGCAATTGAACAAAAACATCGCTGGCGCACGTGAAAAA
TTGGAAATAGAAATGGAAAATGCCATCCATGAACACAAGACAATGCTCATGAAGCAAGAA
CTGATACGTCGCCAAGAAGAACTCTCACGTATTGAAGATCAACGAAAACGGGACCTGGAA
AGAAGAAAGCAACTTGAATATGAACGTGAAGACCGACACAATAAAGAACTTGAAGCGTTG
GCAAAAAGACAGGAAATATTACGAGCTCAGATTGAAGGAGCTTTGGTGGGCCACCCCCAA
TGGCTCGTGACGGCCCAATGGATTACATGGGAGGTGGACAAGGCAGCCTGGGACCAGCAC
CGAGTCGCCAAGCCAGATTTGAACCGGGTCCGGGTGGTAGATCTTTTCCACCTCCCCCAT
TCCCTTCTGGTCCTCCAAGCGGTCAAGGATTCGGCCCCGGGCAAAGACGTGGATATCCTG
GAGGTCCAATGGATTTCGATAACGTTCAAAAACGTCGCAGATACTGAAAAACGCGGCGAT
CTCGACCAGTGTCGAAATGTTTTTAAATGAAGAACCTAATCACAAAAAACAACTTGTACA
GACTTTTTTTACTGCCAGACTGCTGCCCTGTCATATAGCCTATGGCAATGGTGAACACTT
AAAGCGCATAATTGTGCCATCNAGGATTAGATGGGCAGTCTTTTGAAACTGACCTACCCG
CTTGACTTTGATGTACCTGAATTGCTACCTAACAGTCATGTGAACGTTTTCTTTGAGTAG
TTTCTTCGTTATTCGGTGTATCATGGGCTTCTACATTTCAATCTCTCCAGAATTGATATT
AAGAACAGCAGACGATATTGTAACCTATCATTGGTGTTGAAGCTTGCAACTACGAGTTTA
CAGAATGGAAAACGTTCTACCTTTTGCTGACCATTTATATATAGGCCTATAGCCACCATC
TGGTTTGACGTATTCCTGAAACATCCGTTTCAATTGACAAGTCATCGTCAGCCTGTGGGG
TAGCGCAAAAATTCGGCCCACTTTGCTCAATAACTTTATAGATGGGGGTGCATTTATACA
CAAATTCCTAGGTCAAGGAATCAATGTTTTCTAAAGTCATATATGCCTTTGTAAGGGAAT
AGTACGGGATGTTTCAAGCTCACATGAGACAAATATCGTAGGCCTATTGATTTTTTCAGG
ATATGCATTTGATCTCTAACCAAATTCGCTTATATAATGTGCCAAAAAACCCTTGATCCG
ATACTGAATTATGCGTGTCACTCGCAGTGGTCTATAATCT
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[85-177] 3.9E-24 - T[179-266] 6.5E-17 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[103-235] 1.77E-32 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[103-175] 18.7 - T[177-238] 11.059 |
| SMART |
RRM_dom (IPR000504) - T[104-171] 8.4E-21 - T[178-246] 5.2E-6 |
| Pfam |
RRM_dom (IPR000504) - T[105-169] 4.5E-17 - T[181-236] 1.1E-10 |
| Pfam |
NOPS (IPR012975) - T[251-301] 4.7E-22 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NONO_HUMAN | 59.489 % | 347 | 2.97E-115 |
| SFPQ_HUMAN | 55.184 % | 347 | 2.36E-112 |
| PSPC1_HUMAN | 61.314 % | 339 | 2.22E-111 |