- Transcript 'Harore.CG.MTP2014.S3...' >
- Transcript 'KH2012:KH.C12.696.v1...' >
- Transcript 'Boleac.CG.SB_v3.S291...' >
- Transcript 'Cisavi.CG.ENS81.R3.1...' >
- Transcript 'Boleac.CG.SB_v3.S401...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S401.g09188.01.t
Possible name(s)
DIXDC1; NAV2; NAV3
Gene model
Location
S401 [72,837 / 74,730]
Amino acid sequence
Length: 630
>Boleac.CG.SB_v3.S401.g09188.01.p
MSIDNDDRTNEFQQQVDTYVAWVNSQLKKRSSSSPVKDLRTDLSNGVLLAELVEIISGEK
IENVRFHAKKYQDKRHNVSLILKFLTSKSIKVHHVTDKDIIEGNIKSIMRLILTLAAHFK
PSSVGSRGNKSVAVAAANATAALSGIHKHVSTSSAYRKHMSSTPCDRRAPHTWASPSKMS
LSRLSEENKSMTSSDGGSFIIKGSTSSDTFISTSLSESRSEDSERTTSXNTVSSTNXEVX
TNSGSSXLYETACSIGECHDDLQSELTTTKELVSVLQNLLLNGETPHLEETEGFQKCLPL
EASCVNEESLIIQSXLXLCQHENNRLKNELAEVRQGYRSAXAGKSALQSRVQQQDKELVA
LRQQILKLNFAHENLLQEKDCISAEVFEQKQANQALSKDLSEKNMTIXHLRDEVGSMSSQ
FQKIGDESKVKLNSVQKLESQVQDLRHQVKILQRFKQSNQKSTVGNEGTIIKESLHSLRI
SMPPHDSRQHIIDTLSQAVKSMTEQSPATPEKSRYHSKTDFVANPSVSYSPKSRRRKEQA
HKGSLTTIIYFNESNMTPIRATTSKKIGEITLKDVKSILRTTDHYRFNFKALDPEFGTVK
KEVFHDDEIVPGWEGKIVAWLEKKPCNGQL
Nucleotide sequence
Length: 1,893
>Boleac.CG.SB_v3.S401.g09188.01.t
ATGTCTATCGATAACGATGATCGAACTAATGAGTTCCAGCAGCAAGTAGACACCTATGTG
GCCTGGGTCAACAGCCAACTGAAAAAAAGAAGCTCATCATCACCAGTGAAAGACTTACGA
ACGGATTTGAGCAACGGTGTTCTATTGGCCGAACTCGTTGAAATTATATCTGGAGAAAAA
ATTGAAAATGTCCGATTCCACGCTAAAAAATACCAAGACAAGCGGCATAACGTGAGCTTG
ATTCTAAAATTTTTAACCTCTAAAAGCATCAAAGTTCATCACGTCACAGACAAAGATATA
ATTGAAGGGAATATCAAAAGCATAATGAGACTCATTCTAACGCTGGCTGCTCATTTTAAA
CCATCAAGTGTCGGTTCCCGTGGCAACAAATCTGTTGCTGTGGCGGCAGCGAACGCTACT
GCTGCCCTCAGTGGCATACACAAACATGTATCTACATCGTCAGCGTACAGAAAACACATG
AGCAGCACCCCGTGTGACCGTAGAGCACCTCATACTTGGGCATCTCCTTCAAAGATGTCT
CTCAGTCGCCTTTCTGAAGAGAACAAATCAATGACATCATCCGATGGTGGGAGTTTCATC
ATAAAAGGGTCTACGTCAAGTGATACGTTCATTTCTACAAGTTTATCTGAAAGCCGTTCA
GAAGATTCTGAGCGTACCACATCTCNTAACACTGTATCTTCTACAAATTTNGAAGTCNTG
ACAAATTCTGGATCAAGTNGTCTNTATGAGACTGCCTGCTCTATTGGAGAATGCCATGAT
GATTTACAAAGTGAGCTAACGACTACGAAAGAACTAGTCTCTGTTCTTCAAAATCTTTTA
TTAAATGGTGAAACGCCCCACCTNGAAGAGACAGAAGGTTTTCAAAAATGTCTGCCATTA
GAAGCNTCCTGCGTCAATGAAGAAAGTCTAATCATTCAATCACANTTAGANTTATGTCAA
CATGAAAACAATCGATTAAAAAATGAACTGGCTGAAGTTCGTCAAGGATATAGGTCGGCA
TTNGCAGGTAAATCAGCGTTGCAATCTCGAGTCCAACAACAAGACAAGGAACTCGTTGCA
CTACGTCAGCAAATTTTGAAGCTAAATTTTGCCCATGAAAATTTACTGCAAGAGAAAGAC
TGCATATCAGCCGAAGTTTTTGAGCAAAAGCAGGCGAATCAGGCATTATCCAAAGACCTC
TCTGAAAAAAACATGACAATAAANCATCTCAGAGATGAAGTTGGCAGTATGTCTTCTCAA
TTTCAAAAAATTGGTGACGAGAGCAAAGTNAAGTTGAACTCGGTGCAAAAATTAGAATCA
CAAGTCCAAGATTTACGACATCAAGTAAAAATTTTACAAAGATTTAAGCAATCAAATCAA
AAGTCAACTGTCGGAAATGAAGGGACGATAATAAAAGAGTCGTTACACAGTTTACGAATT
TCTATGCCACCTCACGATTCAAGACAACATATCATAGATACGTTAAGTCAGGCTGTAAAG
TCTATGACAGAACAATCACCAGCAACACCTGAAAAATCACGATATCATTCGAAAACAGAC
TTTGTTGCGAATCCATCGGTTTCATATTCACCAAAGAGTAGACGTAGAAAAGAGCAAGCC
CACAAAGGAAGCCTAACTACAATTATATATTTCAACGAATCTAATATGACTCCAATTCGA
GCAACTACATCGAAGAAAATCGGAGAAATTACTTTGAAAGATGTCAAAAGCATCTTGCGT
ACAACNGATCATTATAGATTTAATTTCAAAGCTCTTGACCCGGAATTTGGNACAGTTAAA
AAAGAAGTTTTTCACGATGATGAAATTGTACCCGGATGGGAAGGCAAGATCGTGGCATGG
CTCGAGAAAAAACCCTGCAATGGTCAATTGTAA
| Gene3D |
CH_dom_sf (IPR036872) - T[2-122] 8.7E-29 |
| PANTHER |
Dsh/Dvl-rel (IPR015506) - T[10-622] 4.3E-128 |
| ProSiteProfiles |
CH-domain (IPR001715) - T[13-120] 14.097 |
| Pfam |
CH-domain (IPR001715) - T[14-120] 8.1E-17 |
| SMART |
CH-domain (IPR001715) - T[15-118] 4.3E-14 |
| ProSitePatterns |
Actinin_actin-bd_CS (IPR001589) - T[15-24] . |
| SUPERFAMILY |
CH_dom_sf (IPR036872) - T[15-149] 1.11E-27 |
| CDD |
CH-domain (IPR001715) - T[15-119] 1.53941E-15 |
| Gene3D |
DIX_dom_sf (IPR038207) - T[539-627] 7.2E-28 |
| SMART |
DIX (IPR001158) - T[543-625] 8.7E-12 |
| ProSiteProfiles |
DIX (IPR001158) - T[543-625] 21.649 |
| SUPERFAMILY |
Ubiquitin-like_domsf (IPR029071) - T[544-623] 1.45E-18 |
| Pfam |
DIX (IPR001158) - T[546-622] 1.6E-24 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DIXC1_HUMAN | 54.054 % | 138 | 3.65E-34 |