- Clone 'citb016j23' >
- Clone 'cigd039l06' >
- Clone 'cien79863' >
- Clone 'cslv073o10' >
- Transcript 'Boleac.CG.SB_v3.S405...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S405.g09236.01.t
Possible name(s)
POU4F1; POU4F2; POU4F3
Gene model
Location
S405 [46,328 / 48,540]
Amino acid sequence
Length: 322
>Boleac.CG.SB_v3.S405.g09236.01.p
MHQKLKCVMSVHEPRNSKPCSSPTHSVVLQGNLFAGFDESFLARAEALAAVDYTGKSQFK
PEPSVSSYYPMGGPPPHHIPHQTHHHGMSMAPGTVPPPVYGTMPPPPHPGIHHPSPLHSV
PQCVTQTPINITESGVDLMEQLSNPSHCKLIITFICRFKQRRIKLGVTQCDVGQALSKLQ
IAGVSSLSQSTICRFESLTLSHNNMVALKPILTTWLEQAEADYHRRMKESGLAEKKRKRT
SIAAPEKRSLEAYFNLQPRPNSEKIGMIADKLDLKKNVVRVWFCNQRQKQKRMKFSANNG
VGRDIYFLHILKLLCILSTYHK
Nucleotide sequence
Length: 969
>Boleac.CG.SB_v3.S405.g09236.01.t
ATGCATCAAAAGTTAAAGTGTGTGATGAGTGTGCATGAGCCCAGGAACTCCAAACCTTGC
TCATCTCCAACTCACAGTGTTGTGTTGCAGGGAAATCTTTTCGCTGGATTTGATGAGTCC
TTTCTCGCGCGAGCAGAAGCGCTAGCGGCTGTTGATTACACCGGAAAAAGTCAGTTCAAA
CCGGAACCATCCGTTTCAAGTTATTACCCAATGGGTGGACCACCACCGCATCACATACCC
CATCAAACACACCACCATGGAATGTCAATGGCTCCAGGAACTGTACCTCCACCTGTATAC
GGTACGATGCCACCTCCACCACACCCAGGAATTCATCATCCGTCACCGTTGCATTCAGTA
CCCCAATGTGTCACGCAAACCCCTATAAATATCACAGAATCTGGAGTCGATCTAATGGAG
CAACTAAGCAATCCNTCTCACTGCAAACTTATTATCACGTTCATTTGCAGATTCAAGCAA
CGAAGAATCAAGCTGGGAGTAACGCAGTGTGACGTTGGTCAAGCGTTATCAAAGTTGCAA
ATAGCAGGAGTAAGCTCTCTNAGCCAAAGTACAATATGTCGATTTGAATCGCTAACATTG
AGCCATAACAACATGGTTGCGTTAAAACCAATCCTGACAACATGGCTTGAACAGGCAGAA
GCTGACTATCATCGGAGAATGAAAGAATCCGGACTGGCGGAAAAGAAACGCAAGCGAACG
TCAATCGCAGCCCCGGAGAAACGCTCATTAGAGGCTTATTTTAATCTGCAGCCGCGGCCA
AATTCAGAAAAAATTGGNATGATTGCTGACAAGTTAGATCTGAAGAAGAACGTCGTAAGG
GTATGGTTTTGCAATCAAAGACAAAAACAGAAAAGGATGAAGTTTTCAGCAAACAACGGG
GTTGGTAGAGACATATATTTTCTACACATTCTGAAACTTTTGTGTATTCTATCAACCTAT
CATAAGTGA
| ProSiteProfiles |
POU_dom (IPR000327) - T[143-220] 36.162 |
| SMART |
POU_dom (IPR000327) - T[143-220] 1.1E-37 |
| Pfam |
POU_dom (IPR000327) - T[153-220] 9.7E-26 |
| SUPERFAMILY |
Lambda_DNA-bd_dom_sf (IPR010982) - T[154-220] 2.81E-17 |
| ProSitePatterns |
POU_dom (IPR000327) - T[161-173] . - T[188-201] . |
| PRINTS |
POU (IPR013847) - T[162-179] 5.3E-35 - T[188-201] 5.3E-35 - T[204-219] 5.3E-35 - T[234-254] 5.3E-35 - T[269-284] 5.3E-35 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[233-293] 16.309 |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[234-293] 8.13E-15 |
| SMART |
Homeobox_dom (IPR001356) - T[235-297] 3.8E-16 |
| CDD |
Homeobox_dom (IPR001356) - T[236-294] 5.05901E-14 |
| Pfam |
Homeobox_dom (IPR001356) - T[236-292] 5.2E-16 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[268-291] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PO4F2_HUMAN | 75.839 % | 231 | 2.32E-73 |
| PO4F3_HUMAN | 51.438 % | 247 | 2.1E-80 |
| PO4F1_HUMAN | 77.027 % | 230 | 1.17E-72 |