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- Transcript 'Cisavi.CG.ENS81.R151...' >
- Transcript 'KH2012:KH.L112.2.v3....' >
- Transcript 'Boleac.CG.SB_v3.S406...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S406.g09261.01.t
Possible name(s)
EDEM1; EDEM2; EDEM3
Gene model
Location
S406 [116,432 / 124,797]
Amino acid sequence
Length: 481
>Boleac.CG.SB_v3.S406.g09261.01.p
MXEFWREYYGNQYRHFSNEERISLREKAREMFYFGYDNYMKFAFPQDELNPIDCSGRGPD
VENPVLGSLVSAHLLIDDPKQPFGDLRPDDYDDELLSLAHDLAARLMSAFENTPNGIPYP
RVNLIYGVPKDTLTGTATAGAGSLLLEFGMLSRLIGDPTFESVARRAVREIWKRRNRVTG
LLGDAIDITTGQWTSRLSGVGAGVDSYFEYLLKAYILFGEHEDLQMFTEAMQSIKNFLRR
GREHCNSGSGDPPIYVNVDIRNGLMLNTWVDSLQAFLPGLLVLNGDVEEAICCHALYYAI
WKRYEALPERFNWRMKEPDVLFYPLRPELVESTYLLYQATKNPFYLHVGREILQSINRHS
RTHCGYASLHNVVDKSQEDRMESFFLSETCKYLFLLFDHDNPVNDKQLHWIFTTEGHILK
VGERSRHKPWEDSLCFNSEQTFNTAIPVARNCSRVPLARTFGLPLRRSYLNQVDELVGIN
L
Nucleotide sequence
Length: 2,782
>Boleac.CG.SB_v3.S406.g09261.01.t
ATCGGCGGAAAATTATAATTTTTTCGGAAAAGGAAGCCGTCATCAATCTTATCGTTTGAA
AAATGATAGCTCAATGCANGAGTTCTGGCGGGAATACTACGGGAACCAGTACCGCCATTT
TTCTAATGAAGAACGAATATCACTGCGAGAGAAAGCTCGTGAAATGTTCTATTTTGGATA
TGATAACTACATGAAGTTTGCTTTTCCTCAGGATGAACTCAATCCAATTGATTGTTCTGG
CCGCGGACCTGATGTGGAAAATCCAGTGCTGGGCTCATTGGTGTCGGCCCATTTGTTGAT
TGATGATCCAAAACAACCATTTGGTGACCTTCGACCTGATGATTATGATGACGAACTTCT
GTCTTTGGCTCACGATCTTGCCGCAAGGTTGATGTCGGCCTTCGAAAATACCCCGAACGG
AATACCTTACCCAAGAGTCAATCTAATTTACGGGGTTCCAAAAGACACGTTGACTGGTAC
AGCGACGGCCGGCGCAGGCAGTCTGCTTCTTGAATTTGGAATGTTAAGTCGTTTGATCGG
GGATCCAACTTTTGAAAGCGTAGCTAGACGAGCTGTGAGAGAAATTTGGAAAAGAAGGAA
TCGTGTCACTGGTCTATTAGGCGATGCGATTGATATCACTACTGGACAGTGGACTAGTAG
ACTGAGCGGAGTCGGTGCCGGTGTTGATTCTTATTTTGAGTATTTATTGAAGGCCTACAT
CCTGTTTGGAGAACACGAAGATTTGCAAATGTTCACTGAAGCTATGCAAAGTATCAAAAA
TTTTTTAAGGCGCGGACGAGAGCACTGCAATAGTGGATCTGGTGACCCACCAATCTATGT
CAACGTTGACATCAGAAATGGCCTCATGCTAAACACTTGGGTTGATTCGTTACAAGCNTT
TCTGCCAGGATTGCTGGTACTAAATGGAGATGTTGAAGAGGCCATATGCTGCCACGCTCT
GTATTATGCAATTTGGAAAAGATACGAAGCTCTTCCAGAACGATTTAATTGGAGAATGAA
AGAACCCGATGTGTTGTTCTATCCTCTCCGCCCAGAGCTTGTGGAAAGCACTTACCTACT
CTATCAGGCCACAAAAAATCCATTTTATCTTCACGTCGGACGAGAAATCCTTCAATCCAT
CAACCGTCACTCCAGAACGCATTGTGGCTACGCATCACTGCACAATGTTGTCGATAAATC
CCAAGAGGATCGAATGGAATCATTTTTTCTTAGCGAAACTTGTAAATATTTATTTTTGTT
ATTTGACCACGACAATCCTGTGAATGACAAGCAGTTGCATTGGATTTTCACAACTGAGGG
TCACATCCTCAAGGTTGGTGAGAGGTCGCGGCATAAACCATGGGAAGATTCCTTGTGTTT
CAACTCAGAGCAGACGTTCAATACTGCAATTCCTGTTGCGAGAAATTGCAGTCGTGTTCC
TCTCGCACGGACCTTTGGTCTTCCGTTACGTCGCAGTTACCTCAACCAAGTTGATGAGCT
TGTTGGCATCAACTTATGACAAGACGCGGAAACAGGCAGACAAAAAGCTTGCCAAGATCA
TAGTAAAACAGATTATACATCACTATACCGCCCAGGAGATTTNCAGCATGAGATGAAACA
CACTGTCGTCAACGACCAACAGCAGGAGATGAATATCGATTTGTCGATGAAAAGTTTGAT
AACTTTCGCATCAGTTTTTCTCTCGTCAATGCATTTCATCGTTACCTTGGTGCAGTTTCT
CAGAAATTTGATTTTTCGTCGAGGTGGACAAGCCTAGCTCCAGCATGGAATGTCTAGAGA
TCGCAACAATCCCAGGCCCTGACTTAAGGTGAATACAAACAGCCCCACTTCATCGATACT
CGTAAATTCCTTATTCACTTGACATAGACAAGCTGAACTCGACCACACAGCACACTCTAA
TGACCCTCTCCACTGAAATATTGGAAAAGCTGTATGACATCGTCATAGACTTGGAATAAA
GCCCCATTTTTAATTACGCTTGGCTTGAATGAATGAATGAATGTTGCTTATTAACTCAAG
CTCTGCTGTGATGCTCCACTGATCCATACTTCTTGAGCGCTACTAACAAACACCAATTTG
CTACACTTGTACACTATCGAACGCAGGTTTTGCCACATTCTACCCATGAAAGGTATAGTG
ATGTTTTGCTTGTTGCAAGCTATTTACTTGTGTCTGTCTGTTTCCACAAGTCGACTATGT
GGTTGTTTTTGGTTTATTCCAACGCCAGTCCCCATTGGTGTGAATTATCATGGCAGCTCA
GGGATGTTTCTCGCGACTATTTCATGAAGTTCACAATGCTTATGGGGACGTGGCCGTTCA
AGTGACTTGCTCCAGATGACGAATTTCCCTCGAGCAGGTGAGATTTCCCTGTATTGTTCC
GCTGCATCGGTCTATTTGAATATCGTCGCTCTTTTCAAACCACTCTTGCCGTAGCGTCGC
TCGATACCGAACCGAATCGATATTGAGTTACGTTAGAGCATACTTTCTTTCGAGGGAATT
TTTGATTCTATCATCATTACGCGACAATTATATTTGGGGATTGCGGTGTTATATGTAGGA
TTATTCGAAAAATTAATATATGTAATTATCGTTATTCATTCTTAGTCTTCCGCGTGATTA
TAAGAGTGCCTTTTTGTGTGTTGTAACAATTTTATTTGCGTCCGTTTTATTGTGCGACCA
TTTTTGTGTCGTCTTCAGCATGTTCAAGGAGGGCCTGCGGTCAAAATATGATGGTGGCTC
ATCAAATTAAGGATGGAAGGGT
| Gene3D |
6hp_glycosidase-like_sf (IPR012341) - T[13-64] 6.2E-9 - T[65-432] 6.4E-116 |
| SUPERFAMILY |
Seven-hairpin_glycosidases (IPR036026) - T[21-430] 4.06E-121 |
| PRINTS |
Glyco_hydro_47 (IPR001382) - T[31-51] 2.0E-25 - T[269-285] 2.0E-25 - T[324-348] 2.0E-25 - T[383-403] 2.0E-25 |
| Pfam |
Glyco_hydro_47 (IPR001382) - T[65-421] 1.2E-89 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| EDEM3_HUMAN | 44.543 % | 277 | 4.61E-84 |
| EDEM2_HUMAN | 34.656 % | 258 | 1.1E-79 |
| EDEM1_HUMAN | 62.763 % | 561 | 0 |