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- Transcript 'Boleac.CG.SB_v3.S403...' >
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- Transcript 'Boleac.CG.SB_v3.S41....'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S41.g09304.01.t
Possible name(s)
FP565260.1; PWP2; WDR5
Gene model
Location
S41 [141,952 / 144,719]
Amino acid sequence
Length: 871
>Boleac.CG.SB_v3.S41.g09304.01.p
MKYNYEFANLLGTVYTKGNVSFIPKEDTLCSPVGNHITFFNLKENTSETLPITTKYNIEH
IAFAPDCVLAIIIDEEGNAYLISLQSKTILHTFKFRDPVSCIKFSPDGTKFAISMGKVLL
VYHAPGKTREINPFQLFRTYHDAFDDISNISWSDNSMVFAMCGKDNMTRIHSIARGRNLK
YMFGGHKNEVIACFFENQSLDLYTVGKGGVLNMWECDVDMELFDKDMDEDLQTEVRQNKW
NYKKVSKHYYKMDGDWNTVISVDYHKQTHILCTGLESGSFLLHELPDFNWIHSLNMSDHP
ISSVSFNPTGDWIALGCSESGQLLVWEWRSESYVMKQHGHLNNMTCVEYSPDGRFLVTGG
EDNKVKLWNSSSGFCFVTFTEHKSGITGVAFTSNGNVVVSSSLDGTVRAFDMHRYRNFRT
FTSPTPVQFISLSVDSSGELICAGSRDDFGIFLWSMQTGRLLDILAGHEGPVVSLAFSSR
ESLLASGSWDGTVRLWNVLEGKGARETLTINHDILAVAFNPGGSEVAASSINGEITLWNT
STGAQTGTIECKYDITSGKNELDRTSSRTKSEGKMYDTIAYSADGSSLIAGGKFLNICIY
SVEECLLVKKFIVSQNLSFDSTQEFLDKRRMTEFGPMALXDTEGGNAKKIKLPGVMKGDM
CSRAFKPEVRVSEVKFSPTGREWSAVTTEGILVYSLDGNTAFHPFEVSTDVTPETIKEKS
KLGEHGIAISMALRLNERDVLREVLENVPYTSIEVLAQHMNISQAEKLLRHIGQEISKTN
HLQFYVLWIKHLLSHHAVAMKNRLKRSLPVVNNLLKHLIVIKESLGSICDQNRHQIELIC
AVAEHPSKKMKLETEESSDDDSGIHNLIDDL
Nucleotide sequence
Length: 2,616
>Boleac.CG.SB_v3.S41.g09304.01.t
ATGAAGTATAACTATGAATTTGCGAACTTGCTGGGAACAGTGTACACAAAAGGAAACGTG
TCATTTATTCCAAAAGAGGACACACTTTGCAGTCCTGTTGGAAATCATATCACCTTCTTC
AACTTGAAAGAAAACACGTCGGAGACACTTCCCATCACAACTAAGTACAACATAGAACAT
ATTGCTTTTGCACCGGACTGTGTACTCGCCATTATTATTGATGAAGAGGGGAATGCCTAC
CTAATAAGTTTACAGAGCAAAACTATTCTGCATACATTTAAATTCAGAGACCCTGTCTCA
TGCATCAAATTTAGTCCGGATGGTACAAAATTTGCAATAAGTATGGGAAAAGTACTTCTC
GTCTATCATGCTCCTGGAAAAACGAGGGAAATAAACCCATTCCAATTATTCAGAACTTAT
CATGATGCCTTCGATGATATCTCAAACATCAGCTGGTCAGATAATTCAATGGTATTTGCC
ATGTGTGGCAAAGACAATATGACCCGTATTCACTCTATTGCACGAGGGAGGAATCTAAAA
TATATGTTTGGCGGCCACAAGAATGAGGTCATTGCATGCTTTTTTGAGAATCAATCATTG
GATTTGTATACGGTTGGTAAGGGGGGTGTGTTAAATATGTGGGAATGCGATGTGGATATG
GAACTGTTTGATAAAGATATGGATGAAGATTTGCAGACGGAAGTGAGACAAAACAAGTGG
AATTATAAGAAAGTTTCAAAACACTATTACAAAATGGATGGAGACTGGAACACAGTGATA
AGTGTGGATTATCACAAGCAAACCCACATTTTATGCACTGGATTAGAATCAGGGTCGTTT
CTCTTACATGAACTACCAGACTTCAATTGGATTCACTCTCTGAACATGTCAGACCATCCA
ATATCATCAGTTTCATTCAATCCAACCGGAGATTGGATTGCGTTAGGTTGCTCCGAATCT
GGTCAACTACTTGTCTGGGAATGGCGTAGTGAATCCTATGTAATGAAACAGCATGGCCAT
TTGAATAACATGACCTGCGTCGAATACTCTCCAGATGGTCGCTTCTTAGTCACTGGTGGT
GAAGATAATAAAGTAAAACTGTGGAATTCATCAAGTGGTTTTTGTTTTGTTACCTTCACT
GAGCACAAGTCTGGNATAACTGGTGTTGCTTTTACCAGCAACGGTAATGTTGTGGTATCA
TCATCGTTAGATGGCACTGTGCGAGCATTTGACATGCACAGGTATAGAAACTTCCGCACA
TTCACTTCGCCAACNCCTGTTCAATTCATTTCTCTCTCTGTGGACTCGAGTGGGGAGTTG
ATTTGTGCTGGCTCAAGGGATGATTTTGGAATTTTTCTATGGTCAATGCAAACTGGCAGA
CTACTTGATATTCTTGCTGGACATGAGGGACCAGTAGTGTCATTGGCTTTTTCATCAAGG
GAATCACTTTTGGCGAGTGGCTCATGGGATGGAACAGTGCGCCTTTGGAATGTTTTAGAA
GGAAAAGGAGCAAGGGAAACTCTGACCATAAATCACGATATCTTGGCAGTTGCATTCAAT
CCTGGGGGTTCAGAAGTTGCTGCATCTTCTATCAATGGAGAAATCACACTTTGGAATACA
TCAACAGGTGCTCAGACTGGGACAATTGAGTGCAAGTATGATATAACATCAGGGAAAAAC
GAATTAGATCGCACATCATCACGTACAAAATCTGAGGGAAAGATGTATGATACAATTGCA
TATTCAGCCGATGGCTCATCTCTAATTGCTGGAGGGAAATTTCTCAATATATGCATTTAC
AGTGTAGAGGAATGCCTACTCGTGAAGAAGTTCATCGTGAGTCAGAATTTATCATTTGAC
TCGACACAAGAGTTTTTGGATAAAAGGCGAATGACAGAATTTGGTCCAATGGCACTANTC
GATACTGAGGGTGGAAATGCAAAGAAAATTAAACTGCCTGGCGTTATGAAAGGTGACATG
TGCAGTCGAGCTTTCAAGCCAGAGGTTCGAGTGTCAGAAGTGAAGTTTTCCCCCACTGGC
CGTGAGTGGTCAGCAGTCACAACAGAGGGTATACTTGTATATTCTCTTGATGGTAACACG
GCTTTCCATCCTTTTGAAGTAAGTACAGATGTCACACCCGAAACAATCAAAGAAAAGTCT
AAATTAGGCGAACATGGTATTGCTATCAGTATGGCTCTGCGATTGAATGAAAGAGATGTA
CTTAGGGAGGTATTGGAAAATGTGCCTTACACGTCAATTGAAGTGCTGGCGCAACACATG
AATATTTCCCAAGCTGAAAAACTACTGCGTCACATCGGTCAAGAAATAAGCAAGACCAAC
CATCTGCAGTTCTACGTTTTGTGGATTAAACACCTTCTTTCCCACCATGCTGTAGCAATG
AAAAACAGACTGAAAAGATCACTACCGGTTGTAAATAATCTTTTGAAACATTTGATTGTT
ATAAAGGAAAGCCTAGGATCAATCTGTGATCAAAACAGGCACCAAATTGAACTGATATGT
GCAGTGGCTGAACATCCGAGTAAGAAGATGAAACTCGAGACAGAGGAGAGCTCTGACGAT
GACTCTGGAATTCACAACCTCATTGATGACTTGTGA
| PANTHER |
PWP2 (IPR027145) - T[4-859] 0.0 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[12-116] 2.9E-6 - T[117-333] 1.6E-18 - T[334-432] 1.6E-27 - T[433-698] 4.8E-33 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[20-214] 5.31E-26 - T[249-295] 5.31E-26 |
| SMART |
WD40_repeat (IPR001680) - T[86-123] 0.86 - T[133-172] 1.2 - T[176-215] 10.0 - T[287-327] 0.35 - T[330-369] 2.6E-8 - T[372-411] 3.9E-7 - T[414-455] 93.0 - T[458-497] 7.0E-11 - T[501-539] 0.49 - T[658-695] 340.0 |
| SUPERFAMILY |
Quinoprotein_ADH-like_supfam (IPR011047) - T[240-617] 1.33E-62 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[252-548] 46.35 |
| Pfam |
WD40_repeat (IPR001680) - T[297-326] 0.029 - T[338-369] 1.3E-7 - T[375-410] 4.4E-5 - T[460-497] 4.2E-8 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[337-378] 15.454 - T[379-420] 12.313 - T[465-506] 16.39 - T[514-548] 9.539 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[356-370] . - T[484-498] . - T[526-540] . |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[356-370] 3.4E-5 - T[398-412] 3.4E-5 - T[484-498] 3.4E-5 |
| Pfam |
SSU_processome_Utp12 (IPR007148) - T[736-840] 3.2E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| WDR5_HUMAN | 29.464 % | 112 | 8.86E-27 |
| DAW1_HUMAN | 24.242 % | 110 | 1.5E-25 |
| PWP2_HUMAN | 47.238 % | 876 | 0 |