- Transcript 'Phmamm.CG.MTP2014.S6...' >
- Transcript 'Boleac.CG.SB_v3.S428...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S428.g09609.01.t
Possible name(s)
TIGD3; TIGD4; TIGD6
Gene model
Location
S428 [73,127 / 75,307]
Amino acid sequence
Length: 608
>Boleac.CG.SB_v3.S428.g09609.01.p
MDKRRRKSSVTEKLALLDKYRSLMPLSQRQAAQILNISRGHLQNLLKNESTLRNSTLPSQ
NLLKNESTLRNSTLPSQNLLKNESTLRNSTHPLTLQKYDAKVEKEIKMKKASTSLVRTRR
ERTVGEKLALLDKYRSMPMLSQRQTAKILNISRGLLQNLIRNEEAIRDQVSTPAAKRIRF
GKDNKVDEDLVDWLKFAQSKDLPIXGDVLKEKASEIAQDLGHFEFKASDDWYSHWKKSHG
LDNSSKVQSREEQFSNGTESNHQSAEEILQNFSPENIYSAHETALYFCAMPGSTPRDKVT
LLVTCSLDGKKEEVVLVGKSGNPKCTKTIKNPSIPYYTSPNGCMSSAIFEQWLLSWDRRL
QSENRKIVLFVKNCDSHKFTPQFLNISVHFITSSTSTVSLPCEMGLCTALKAYYRYEMRH
RVTEILEDSQNISVIDDAVRKIDLEEVMLMVKTAWAKIPIETIRSCWKIAGFRESNLDLI
DNELAHIQLPDPPVGVTAEQFATWVMIDNDVDTVEVSTDDNFVRTPTSELCGQDDDNGQS
CFSDAIEEVPPDPTEMRRCLDRVRVGLQQTDXEDMEAFYSLKRKIDYHLRERFPFNQRQL
LRFFNSED
Nucleotide sequence
Length: 1,827
>Boleac.CG.SB_v3.S428.g09609.01.t
ATGGATAAGAGAAGGCGAAAGAGTTCGGTCACCGAAAAATTAGCTTTGCTTGATAAATAT
CGATCTCTAATGCCACTGAGCCAACGTCAAGCAGCTCAAATACTGAATATTTCCCGAGGA
CATTTACAAAATTTGCTAAAAAATGAATCAACTCTTCGAAACTCCACCCTCCCTTCACAA
AATTTGCTAAAAAATGAATCAACTCTTCGAAACTCCACCCTCCCTTCACAAAATTTGTTA
AAAAATGAATCAACTCTTCGAAACTCCACCCACCCTTTGACCCTACAGAAATATGATGCG
AAAGTCGAAAAAGAAATTAAAATGAAGAAAGCATCAACCTCATTGGTCAGAACAAGACGG
GAGAGAACGGTCGGTGAGAAATTGGCATTGTTAGACAAATATAGATCCATGCCAATGCTC
AGCCAACGTCAAACTGCAAAAATACTCAACATCTCAAGGGGATTGCTACAAAATTTAATA
AGGAATGAAGAAGCTATCCGAGATCAAGTCTCCACTCCAGCTGCTAAACGAATAAGATTT
GGGAAAGATAACAAAGTTGATGAAGATCTTGTAGACTGGTTAAAATTTGCCCAATCAAAA
GACTTGCCGATCNACGGTGACGTTCTGAAGGAAAAAGCAAGCGAAATTGCTCAAGATCTT
GGGCATTTTGAATTTAAGGCCAGCGATGACTGGTATTCTCATTGGAAGAAAAGCCATGGA
TTAGACAACTCATCTAAAGTTCAAAGCCGTGAGGAGCAGTTTTCAAATGGAACAGAAAGT
AACCATCAATCAGCTGAAGAAATTTTGCAAAACTTTTCTCCTGAAAACATCTATAGCGCA
CATGAAACTGCGCTGTATTTCTGTGCAATGCCGGGCAGCACTCCGCGAGACAAAGTAACA
TTATTAGTGACATGTAGTTTGGATGGAAAGAAAGAAGAAGTCGTTCTTGTCGGGAAGTCT
GGAAATCCAAAATGCACGAAAACTATCAAAAATCCTTCGATCCCATATTATACATCTCCT
AATGGTTGCATGTCGAGCGCAATTTTCGAACAATGGCTTTTATCATGGGATCGTCGATTA
CAGTCTGAAAATAGAAAGATCGTTCTATTTGTCAAAAACTGTGACTCTCACAAATTTACA
CCTCAGTTTCTNAACATTTCTGTNCATTTTATTACTTCAAGTACATCGACCGTTTCGTTA
CCATGTGAGATGGGATTATGTACTGCATTGAAAGCATATTATCGTTATGAAATGCGACAC
AGAGTGACTGAAATTCTTGAAGATTCACAAAATATATCAGTCATAGATGACGCTGTACGA
AAAATTGATTTGGAAGAAGTCATGCTGATGGTAAAAACGGCCTGGGCTAAAATTCCGATT
GAAACAATTAGAAGTTGTTGGAAAATCGCTGGGTTTCGAGAATCAAATCTTGACTTGATT
GACAATGAGTTAGCACATATTCAACTTCCAGATCCACCAGTAGGTGTCACTGCAGAGCAA
TTTGCGACATGGGTTATGATCGATAATGACGTCGATACGGTTGAAGTATCAACAGATGAT
AACTTCGTCAGAACTCCTACATCAGAACTCTGTGGTCAAGATGATGATAATGGCCAGTCA
TGCTTCAGTGATGCCATTGAAGAAGTGCCACCTGATCCTACTGAAATGAGACGATGTCTT
GATCGTGTTAGAGTCGGTCTTCAGCAAACGGATTTNGAAGATATGGAAGCTTTTTACTCG
TTGAAACGAAAAATTGACTATCATCTTCGTGAGAGATTCCCCTTCAATCAAAGACAGCTG
CTGCGGTTTTTCAATTCCGAAGACTGA
| ProSiteProfiles |
HTH_CenpB_DNA-bd_dom (IPR006600) - T[174-245] 13.945 |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[176-240] 5.97E-10 |
| SMART |
HTH_CenpB_DNA-bd_dom (IPR006600) - T[180-245] 1.8E-10 |
| Pfam |
HTH_CenpB_DNA-bd_dom (IPR006600) - T[186-243] 9.8E-10 |
| Pfam |
DDE_SF_endonuclease_dom (IPR004875) - T[297-467] 3.7E-25 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TIGD6_HUMAN | 23.462 % | 155 | 8.43E-41 |
| TIGD4_HUMAN | 24 % | 155 | 6.63E-41 |
| TIGD3_HUMAN | 22.899 % | 115 | 2.39E-27 |