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  1. Transcript 'Boleac.CG.SB_v3.S450...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S450.g09983.01.t

Possible name(s)

LOXL2; LOXL3; LOXL4

Location

S450 [92,829 / 100,087]

Sequences

Amino acid sequence

Length: 768

>Boleac.CG.SB_v3.S450.g09983.01.p
MIDQARMILPYYVSLLFVFALKSYGQVSPDQEGAEESLKIRMRGGELVSEGRIEIKHGDE
WGTVCDDDWNLAGAEVACRMLGFDGALDFVHSGGFGPGEGSILLDNVHCNGDEKSLADCE
HREFGENDCSHHEDAGVKCNPRRIPSYLLKNWVATADGLVNIRLKTPKGIRKRLPHLIGI
VEIFHGDKWRTICADGWIQNNAKVVCGQLGFPGAADIRHMYGHIRNSGQLRRKGSSWLTN
VTCTGDESKLSQCEFNFLNYTRKEKCPAGEAVFIRCTAGDVYTLAAMKQQMRKSRRXNHH
XPKRYTKSHEVIRLKGGPSIGEGRLEVLRDGRWGTVCHNNFDITDGNVACRQLGFGTAKR
ILTNSHYGMAHGPVWMANVACSGNESRIQHCDHQRLSEYYSGYRSFDDTEGCSHYDEVGL
SCYVPDFGLTRRIRIVGGRNPMEGRVEVQVGRKWGPVCSDDWTATEAMVVCRQLGLGFAL
QAVQDVWYFRGSEGADEVLMTGTRCSGKEIGLQYCSHNGKKQRACGDPXRSMTPFAGVIC
TQGSPDLILDIPSLQDSIHLEDVSLSRLQCAAEENCLAPSAAEVDLRVSYGIRRLLRFTT
RVWNRGRADFRPALTPSDWIWHACHGHFHSMAEFTHYDILSLNKTKMAEGHKASFCLEDS
ECDSGVSPRFDCDQPGGGTQGISVGCADTYLYNIDCQWIDMTDLTAGNYLFRIHVNPNTL
VPESDFANNEVLCNMRYDSTSVWVWNCHMADDYDPTVVAKYYNESIYP

Nucleotide sequence

Length: 2,424

>Boleac.CG.SB_v3.S450.g09983.01.t
CATCTTTTAACGAGTCGATAACTTTAAAATAATAATGATAGACCAAGCCAGGATGATTCT
GCCTTATTACGTCAGCTTGCTATTCGTCTTTGCTCTGAAATCGTACGGTCAAGTTTCACC
TGATCAAGAAGGTGCTGAGGAAAGTCTGAAGATTCGCATGCGAGGAGGTGAATTAGTATC
AGAAGGGCGAATTGAAATCAAACATGGCGATGAATGGGGGACAGTTTGTGATGATGACTG
GAATTTAGCCGGAGCTGAAGTGGCTTGTCGAATGCTGGGATTCGATGGTGCCCTTGATTT
CGTTCATAGTGGAGGTTTTGGTCCAGGAGAAGGGTCAATATTACTTGACAATGTCCACTG
CAATGGTGATGAGAAATCGTTGGCAGATTGTGAGCATCGTGAGTTTGGAGAAAATGACTG
TTCGCATCATGAAGACGCAGGCGTTAAATGCAACCCCCGACGAATACCTAGTTATTTGCT
CAAGAACTGGGTAGCGACTGCAGATGGCCTTGTGAATATTCGATTAAAAACTCCTAAAGG
AATCAGAAAACGCCTGCCGCATTTAATCGGTATTGTGGAAATTTTTCATGGTGATAAATG
GCGTACAATCTGTGCGGACGGATGGATTCAAAATAATGCCAAAGTTGTTTGCGGACAGCT
AGGCTTTCCAGGAGCGGCGGATATACGACATATGTATGGTCATATCAGAAATTCTGGTCA
GTTACGTAGAAAGGGAAGCTCCTGGCTGACCAACGTTACTTGCACTGGTGATGAATCAAA
ACTCAGTCAGTGCGAATTCAACTTTTTGAACTACACAAGAAAAGAAAAGTGCCCAGCAGG
TGAAGCAGTCTTTATTCGTTGCACCGCCGGTGATGTGTATACGTTGGCAGCGATGAAACA
ACAGATGAGGAAATCAAGACGTNCGAATCACCACNTTCCGAAAAGATACACTAAATCACA
CGAGGTTATTCGTTTGAAAGGCGGTCCGTCAATCGGCGAAGGACGATTAGAAGTTTTGCG
TGATGGTCGATGGGGAACAGTGTGTCATAATAACTTTGATATCACGGATGGAAATGTTGC
TTGCCGTCAATTAGGATTTGGAACGGCGAAGAGAATTTTAACCAACTCACATTACGGGAT
GGCGCATGGACCTGTATGGATGGCAAACGTCGCTTGCTCGGGTAACGAATCAAGGATACA
ACATTGTGACCATCAACGATTATCGGAATATTATTCTGGATATCGGTCGTTTGATGATAC
AGAAGGATGCAGCCACTACGATGAAGTTGGTTTGTCATGTTATGTACCGGACTTCGGTTT
AACACGAAGGATAAGAATCGTAGGTGGCAGAAATCCTATGGAAGGCAGAGTCGAGGTTCA
AGTGGGACGCAAGTGGGGTCCGGTTTGTAGTGACGATTGGACAGCAACTGAAGCCATGGT
AGTATGCAGACAGTTGGGCTTAGGATTTGCCCTACAAGCAGTGCAGGATGTATGGTATTT
TCGTGGGAGTGAAGGCGCTGATGAAGTGTTGATGACCGGAACGAGATGCTCAGGGAAGGA
AATCGGATTACAGTATTGCTCTCATAATGGCAAAAAACAACGGGCGTGCGGTGACCCTCN
ACGTAGTATGACGCCATTCGCTGGAGTCATTTGTACTCAGGGATCCCCTGACTTAATTCT
GGATATTCCAAGTCTTCAAGATTCAATCCATCTAGAGGACGTCAGCCTCTCTCGACTGCA
ATGTGCTGCTGAAGAAAACTGCCTGGCACCTTCAGCAGCGGAAGTCGACTTACGAGTGAG
CTACGGAATTCGGCGGCTCTTGAGGTTTACGACACGAGTATGGAATAGAGGCCGCGCGGA
TTTCAGACCAGCACTTACACCAAGCGATTGGATTTGGCACGCCTGCCACGGGCACTTCCA
CAGTATGGCTGAATTCACGCATTACGACATATTAAGTCTGAATAAGACGAAAATGGCCGA
GGGACACAAAGCGAGTTTTTGCCTGGAAGATTCAGAATGCGACAGCGGCGTGTCTCCAAG
ATTTGATTGCGATCAGCCTGGTGGTGGCACACAGGGAATATCAGTCGGATGCGCAGACAC
GTACTTGTACAACATTGATTGCCAATGGATTGATATGACTGATTTAACCGCAGGGAATTA
CTTATTTCGAATTCACGTCAACCCAAATACTTTGGTACCGGAGTCGGATTTCGCAAATAA
CGAGGTGTTGTGCAATATGAGATATGACTCCACGTCAGTTTGGGTATGGAATTGTCACAT
GGCTGACGACTACGACCCAACAGTTGTCGCAAAATATTACAATGAATCAATATATCCGTA
AGCACGATCGTTGAATCGGCGATACCGGTACTGTACAAGTTTCTTCTAGCATTAACAATT
AAACGCAACCTGAGTTCAATAAAT

InterProScan

Gene3D
SRCR-like_dom_sf (IPR036772) - T[33-145] 1.1E-36 - T[162-283] 1.1E-23 - T[305-426] 3.9E-32 - T[429-545] 8.9E-27
SUPERFAMILY
SRCR-like_dom_sf (IPR036772) - T[36-143] 5.1E-36 - T[176-279] 3.53E-22 - T[312-423] 1.83E-29 - T[431-546] 8.76E-27
PRINTS
SRCR (IPR001190) - T[40-56] 6.2E-17 - T[59-70] 6.2E-17 - T[74-84] 6.2E-17 - T[105-119] 6.2E-17 - T[128-140] 6.2E-17
ProSiteProfiles
SRCR (IPR001190) - T[40-140] 29.985 - T[162-277] 20.982 - T[312-423] 26.851 - T[433-541] 26.342
SMART
SRCR-like_dom (IPR017448) - T[40-140] 2.6E-47 - T[162-277] 2.2E-20 - T[312-423] 2.9E-38 - T[433-541] 8.4E-35
Pfam
SRCR (IPR001190) - T[44-140] 4.5E-29 - T[179-276] 3.9E-19 - T[316-422] 2.0E-23 - T[436-540] 5.4E-23
ProSitePatterns
SRCR (IPR001190) - T[45-82] . - T[317-354] . - T[438-475] .
Pfam
Lysyl_oxidase (IPR001695) - T[545-749] 2.2E-90
PRINTS
Lysyl_oxidase (IPR001695) - T[554-578] 1.4E-35 - T[601-622] 1.4E-35 - T[623-643] 1.4E-35 - T[673-695] 1.4E-35 - T[696-715] 1.4E-35 - T[716-733] 1.4E-35

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
LOXL2_HUMAN 40.83 % 594 0
LOXL3_HUMAN 42.234 % 584 0
LOXL4_HUMAN 41.489 % 581 0





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