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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  2. Molecular Tool 'Microtubule Inhibitor Nocodazole' > 
  3. Transcript 'Boleac.CG.SB_v3.S458...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S458.g10095.01.t

Possible name(s)

COPS2; PSMD11

Gene model

Boleac.CG.SB_v3.S458.g10095

Location

S458 [72,252 / 77,803]

Sequences

Amino acid sequence

Length: 422

>Boleac.CG.SB_v3.S458.g10095.01.p
MAAAVELARAQTLSLQDQKGAINIYKDIVKRDINVADEEGIKLKEQSILELGNLLQKQVQ
GHAEELGGLVKGVRPFLKSISKAKAAKLVRTLVDLFLDMEAGTGLEVQLCKECIEWAKEE
KRTFLRQALEARLVALFFDTEQYEEALKLGSTLLRELKKLDDKQLLVEVQLTESRTYHAL
GNLQKARAALTSARTTANSIYCPPKMQAALDLQSGILHAAAEKDWKTAYSYFYEAFEGYD
SIESKRAISALKYMLLCKIMMKSPEDVQSIVSGKLALKYAGREIDAMKSIAKSSHDRSIS
GLKTALTDYENELKADPIICAHLDKLXDHLLEQNLLRIIEPFSRVQVEHVASIININLGI
VEKKLSQMILDKKFHGILSQGEGVLILFDEPIVDRTYETSLEVISSMSLVVDSLYQKAKR
LT

Nucleotide sequence

Length: 1,896

>Boleac.CG.SB_v3.S458.g10095.01.t
TTCCATTCAGACCTGGTATTAGGCTCTATAGTACATTCACAGCAGGATAACGGTACGGTA
CCTTATACCAGTATAAAGATAGGCCTACTGCAATCGAAGTATATCAAACCGTAGAAAGGA
AGTAAACATCAAGAATGGCGGCCGCGGTGGAGCTTGCACGGGCACAGACGTTGAGCTTAC
AAGACCAAAAGGGTGCTATAAATATATACAAAGATATTGTGAAGCGAGATATCAATGTTG
CTGATGAAGAAGGCATTAAACTTAAAGAACAAAGTATTTTGGAATTGGGGAATTTGTTAC
AAAAACAGGTACAGGGCCATGCTGAAGAATTAGGTGGATTAGTCAAAGGTGTTCGGCCTT
TCCTCAAATCTATTAGCAAAGCTAAAGCAGCCAAATTGGTCCGGACACTCGTGGATCTTT
TTCTTGACATGGAAGCAGGAACAGGATTGGAGGTACAACTCTGCAAAGAATGTATCGAGT
GGGCAAAGGAAGAGAAGCGAACATTTTTGCGTCAAGCATTGGAAGCGAGACTTGTTGCCT
TGTTCTTTGACACAGAACAATACGAAGAAGCTCTCAAACTAGGGTCTACGTTATTGAGAG
AATTGAAAAAGCTCGATGACAAGCAACTCTTAGTTGAAGTTCAGTTGACTGAGTCAAGGA
CATATCATGCTCTTGGGAATCTACAGAAAGCCCGAGCCGCACTCACATCTGCCAGAACAA
CAGCAAACTCAATATATTGTCCACCTAAAATGCAGGCAGCATTGGATCTGCAATCCGGCA
TCCTTCACGCTGCTGCTGAAAAAGATTGGAAGACGGCTTATTCATATTTTTACGAAGCAT
TTGAAGGATATGACTCTATCGAAAGCAAACGTGCCATCTCCGCATTAAAATACATGCTGC
TCTGCAAAATAATGATGAAAAGCCCAGAAGATGTGCAATCTATTGTGAGTGGAAAATTGG
CTTTGAAATATGCTGGCAGAGAGATCGATGCTATGAAAAGTATTGCTAAGTCAAGTCATG
ATAGATCAATTTCAGGACTGAAAACGGCACTGACTGACTATGAAAATGAACTTAAAGCTG
ATCCCATCATCTGTGCTCACCTTGACAAATTANACGATCATTTACTGGAACAAAATCTCC
TACGAATCATTGAGCCCTTTTCAAGAGTGCAAGTGGAACATGTAGCAAGCATCATCAATA
TCAATCTTGGCATTGTTGAAAAGAAATTGTCCCAAATGATTCTTGATAAAAAGTTTCACG
GAATTTTATCACAAGGCGAAGGTGTCCTTATTCTTTTTGATGAGCCAATAGTGGATAGGA
CGTATGAGACATCACTTGAAGTTATCAGCAGCATGTCTCTCGTCGTGGACAGTCTCTATC
AAAAGGCCAAACGACTCACATAACCTCCTCACTTGAAACGAAAGAACACTTGCATATTTT
GCAAATTACGGNGTAGATACAAAAACTTGCATATAATATTCGCAATTTTCAGCTACTGGT
CGATTGAGAATTTGTTCTGAATCAAANTATTTTCAAAAGCGGTTGTATGGTCAAACAAGC
GTTCAAACGTACATACATGACCTGAAATATCAATCCCACTTGCTATTGCCAGTACCTGAA
TGACGCATGTACCGTTGTACCTACTTTTATGAAGTCGGGTGCAGGCCTGTACAGTAATGC
ACCCTGTCAATAAAACTTTTTTTCGGAGATGTATTGACGGTCTATTGAGTTTGCTTGCTT
CCTTCTCGACTTGAAGAGGTTGTCCTTACAATTGCCTATTTTCAGATGTTTGGATCACCC
AATCTAGCAAAAGTTTGTGTTTCGCCAGTTCGTAGGTCAAGAGTAAAATATGACCTCAGT
AATTGCGCCCAACCAGCGTGCGTACTGTATTTTATT

InterProScan

PANTHER
PSMD11 (IPR035295) - T[2-422] 2.4E-209
SUPERFAMILY
TPR-like_helical_dom_sf (IPR011990) - T[109-330] 1.82E-5
Pfam
PCI_dom (IPR000717) - T[286-387] 1.0E-13
SUPERFAMILY
WH_DNA-bd_sf (IPR036390) - T[316-391] 2.15E-14
SMART
PCI_dom (IPR000717) - T[321-404] 5.4E-13

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PSD11_HUMAN 71.496 % 624 0
CSN2_HUMAN 24.926 % 89 3.22E-19