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- Transcript 'Boleac.CG.SB_v3.S458...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S458.g10096.01.t
Possible name(s)
RPAP3; SPAG1; TOMM34
Gene model
Location
S458 [78,810 / 83,272]
Amino acid sequence
Length: 1,155
>Boleac.CG.SB_v3.S458.g10096.01.p
MADTGMAGVNSTFSSTEVTVDHMDYTYIEKCSNEKELARILRALRTGREGYYPDLIEFCE
KKLRSINSDHRALRKQQPILKAWDLGQDDLADLNKDMDHWASHMKTMDEEATEKKIFEST
LQGGHSNGFADRGDVPPVRGSKIIKGGKGKAVNDCKTPNPXRIKSSDYKAWDKFDVDQEC
EKIDQEASTPAPGPKPVKISRTIDASNLSDEEKRMKAVKEKEKGNEAFKSGDFEEALSYY
CRSICLHPIAASYNNRALVYLRLEKWKDAVNDCNTVLQLEGESNNLKALLRRATAYKSLK
RYDDASSDIHFVLEKEPNNARAKSILDDIQKVKNVQDEQPIEEASISAVDEAVEKKGKKM
MITEVEGDSSDENQSSPRTEDVASSSLELATEGKASVKNQNSNKTDNVNSSSQQSTTEEK
VTVKKEDTIESISNEQSSEAVETTTTKATENQTTEANDPKENTEPVEESSTVQQHVNPVF
PPKTAQYKXEAAQFFKAGRYTEACESYSKAISSLSTFLEQGNTDLCYKLACAVLYNNRAA
CKLKQGDDKACIEDCNKVLEIKSWDIKAFMRRGSAYENIEKYKXAWADYQSAYSMDRQXA
FAQNGANRVSNHLREIYGGKWREKVPKVETYPYQSITNLPNINKMSQNQQVVXSVSXKVI
PPTNVASESKENTVMNSMQKDESKNDVTSKNPVQKQNTQKETKKKQXKKKRNKSKSKSPQ
RIETPSPTVEEIEKENKRXKIRQELYQKLKXEGNDLVKSGKYKEAIENYTRCLSLCPKEP
ASYTNRALCFLKLKKHXSAINDCTEAIKLEPCNVKAYYRRAQARKAEGYHKDALRDVKKL
LDIDPGNKAAQNELENLKKLTLQTETCAAKTECKPQTERRKQMVIEEVDSSDSSDEGEFV
LPKENFQCSADKIPQQEPNVNKNEAAMESIKQQMKKVLGNEEDSELGXQSFTKSSPQPKS
QEQVPXITIENNSEAAKNASTQQIXKMPSNDKVNEVGCQSGTKSSPQSQSDKLAEERPSS
GPSINVRLQDXKPLTPYEFGNLWSAIANKXNSDEYKALLLRVXPTELPTLISNKIDDHVI
KTVATVALEQITMNNDCKYAYDMLSHLTKAKRFGMASMFMEPSDKKALKDVFHAMRKYDS
VSTNEIKVLETLYGV
Nucleotide sequence
Length: 3,653
>Boleac.CG.SB_v3.S458.g10096.01.t
CCTGTGAAGTACGGTAGAAAATGGCAGATACCGGTATGGCTGGAGTGAATTCCACTTTCA
GTAGTACAGAAGTAACGGTAGATCACATGGATTACACATACATAGAAAAATGTTCTAACG
AAAAGGAGCTAGCGCGGATTTTGCGCGCTCTGCGTACTGGCCGGGAAGGATACTACCCAG
ATTTGATTGAATTCTGTGAAAAGAAGTTGCGTTCAATAAATTCAGACCATCGTGCTTTAA
GAAAGCAGCAACCGATCCTGAAAGCATGGGATCTCGGCCAGGATGATCTTGCTGATTTGA
ACAAGGATATGGACCATTGGGCAAGCCATATGAAAACAATGGATGAAGAAGCAACTGAAA
AAAAGATCTTTGAATCAACTTTGCAAGGGGGGCATAGCAATGGGTTTGCAGATAGAGGAG
ATGTTCCACCCGTGCGGGGATCAAAAATTATTAAAGGTGGTAAGGGTAAAGCTGTGAATG
ATTGTAAGACTCCAAACCCCNACAGGATTAAAAGTTCTGACTACAAAGCATGGGACAAAT
TCGATGTTGATCAAGAGTGTGAAAAAATAGATCAGGAAGCAAGTACTCCTGCCCCTGGAC
CAAAGCCTGTAAAGATATCTCGGACTATTGATGCAAGCAATCTGAGTGATGAAGAAAAGA
GAATGAAGGCTGTAAAAGAAAAGGAAAAAGGAAATGAAGCATTCAAATCTGGGGATTTTG
AGGAAGCACTATCGTACTACTGCAGAAGTATATGTCTTCATCCCATTGCCGCATCTTATA
ATAATAGAGCTCTTGTATATCTAAGACTGGAAAAATGGAAGGATGCTGTGAATGATTGCA
ATACTGTGCTACAATTAGAAGGCGAAAGTAACAATTTGAAAGCCCTATTACGCAGGGCAA
CTGCTTACAAATCATTGAAACGTTATGATGACGCATCATCAGATATTCATTTTGTTCTCG
AGAAAGAACCAAATAATGCTCGAGCAAAGAGTATATTAGATGACATACAAAAAGTCAAAA
ATGTTCAAGATGAGCAGCCAATTGAAGAAGCCAGCATCTCAGCAGTTGATGAGGCTGTCG
AGAAAAAAGGGAAGAAAATGATGATTACTGAAGTGGAAGGGGATTCTTCAGATGAAAATC
AAAGTTCACCAAGGACTGAAGATGTGGCTTCGTCTTCTCTGGAATTGGCCACTGAAGGGA
AAGCTTCTGTGAAAAATCAAAACTCAAATAAGACTGACAATGTCAATTCGTCTTCTCAAC
AATCGACCACGGAAGAAAAAGTTACTGTAAAAAAAGAAGATACTATAGAGTCCATTTCAA
ATGAGCAGTCATCTGAAGCAGTCGAAACTACGACAACTAAAGCTACAGAAAATCAAACCA
CTGAAGCGAATGATCCGAAAGAAAATACTGAACCAGTTGAAGAATCCTCCACAGTCCAAC
AACATGTAAATCCAGTGTTTCCACCCAAAACAGCACAATACAAANCTGAAGCAGCACAAT
TTTTTAAAGCAGGCAGGTACACTGAAGCCTGTGAATCATATTCCAAAGCAATATCTAGTT
TGTCTACATTTTTGGAGCAAGGCAACACTGATCTTTGTTACAAATTAGCCTGTGCAGTTT
TGTATAACAACCGAGCTGCATGTAAGCTTAAGCAAGGTGATGACAAAGCATGTATAGAAG
ACTGTAATAAAGTCTTAGAGATTAAATCATGGGACATAAAAGCATTTATGAGACGAGGTT
CGGCATATGAAAATATTGAAAAATACAAAANCGCATGGGCAGATTACCAATCAGCATATA
GCATGGATCGNCAAAANGCCTTTGCACAAAATGGTGCTAATAGAGTGAGTAACCACTTAC
GGGAAATTTATGGAGGAAAGTGGAGAGAAAAGGTGCCAAAGGTGGAGACATACCCATATC
AAAGCATCACAAATTTGCCAAATATCAACAAAATGTCACAGAATCAACAAGTGGTGNAAT
CAGTGTCTGNGAAAGTGATACCGCCNACTAATGTGGCTTCAGAATCAAAGGAAAATACTG
TGATGAATTCNATGCAAAAAGATGAGTCGAAAAATGATGTAACAAGCAAAAATCCGGTAC
AAAAGCAAAACACACAGAAAGAGACAAAAAAGAAACAGANCAAGAAGAAGCGAAACAAAT
CAAAGTCAAAATCTCCACAGAGAATAGAAACACCATCACCTACAGTTGAAGAAATTGAAA
AGGAAAACAAAAGANTCAAAATCAGGCAAGAATTGTATCAAAAACTTAAANGTGAAGGAA
ACGATCTTGTCAAAAGTGGCAAATATAAAGAAGCGATAGAAAATTACACTAGATGCCTTT
CATTGTGTCCTAAAGAACCAGCAAGTTACACAAACCGGGCTCTTTGCTTTTTAAAATTGA
AAAAACACNTATCAGCCATCAACGATTGTACCGAAGCTATTAAATTAGAACCATGCAATG
TAAAAGCGTACTACAGACGGGCACAAGCTCGTAAAGCAGAAGGGTATCATAAAGATGCTC
TCAGGGATGTTAAAAAACTACTTGATATTGATCCAGGCAATAAAGCAGCACAAAACGAAC
TTGAGAACTTGAAAAAATTGACACTCCAAACTGAGACTTGTGCTGCTAAAACAGAGTGTA
AGCCTCAAACGGAACGTCGGAAGCAAATGGTTATTGAAGAAGTGGATAGCAGTGATAGCA
GTGATGAAGGAGAGTTTGTCTTGCCAAAGGAAAATTTTCAATGCTCAGCTGACAAAATAC
CTCAACAAGAGCCTAATGTCAACAAAAATGAAGCTGCAATGGAGTCTATTAAACAGCAAA
TGAAAAAAGTGCTGGGTAATGAAGAGGACAGCGAATTAGGTNCTCAATCTTTCACNAAAA
GCTCACCCCAACCTAAAAGCCAGGAACAAGTGCCTCNTATTACCATTGAAAATAACAGTG
AAGCAGCAAAGAACGCTTCAACACAACAAATAAANAAGATGCCGAGTAATGACAAGGTCA
ATGAAGTAGGTTGTCAATCTGGCACAAAAAGCTCACCCCAATCACAATCTGATAAGCTGG
CAGAAGAAAGACCTAGCTCTGGACCTTCCATCAATGTCCGTTTGCAAGATANTAAGCCTC
TTACTCCTTACGAATTTGGAAATTTATGGAGTGCAATTGCAAACAAAAANAATTCTGATG
AATACAAGGCTCTTCTCCTNAGAGTCANCCCTACAGAACTACCAACACTTATAAGCAACA
AAATCGATGATCACGTCATAAAAACTGTAGCAACTGTTGCACTGGAACAAATTACAATGA
ATAACGATTGCAAATATGCTTATGATATGTTAAGTCATTTGACTAAGGCTAAAAGATTTG
GTATGGCGTCAATGTTCATGGAACCCTCTGACAAAAAAGCTCTTAAAGATGTTTTCCATG
CTATGCGTAAATATGATTCTGTATCAACCAATGAAATCAAGGTATTAGAAACGCTGTACG
GTGTCTAGCAGCACAACTGATACTCTTTTCGTTCAATCATTCGGTCTGGTATGGTTTGGT
CTTGATCACAGTTCGTTTGATCGGTGTGAATAGCTGACTAGTAATTTTTGTTTTCAACTT
AGCTCTGTTACAGCTTGTATTTTTCATCAACTTTTGTAAACTATTGAATAAAC
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[207-373] 2.2E-33 - T[482-624] 3.9E-27 - T[733-899] 1.7E-41 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[217-250] 6.734 - T[250-319] 13.336 - T[532-599] 10.81 - T[746-847] 22.297 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[217-330] 2.46E-24 - T[483-611] 3.32E-22 - T[740-860] 9.49E-31 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[217-250] 7.434 - T[286-319] 7.729 - T[484-517] 6.254 - T[566-599] 8.437 - T[746-779] 9.263 - T[780-813] 8.26 - T[814-847] 8.762 |
| SMART |
TPR_repeat (IPR019734) - T[250-283] 8.6E-5 - T[286-319] 0.017 - T[484-517] 19.0 - T[532-565] 0.089 - T[566-599] 4.4 - T[746-779] 0.2 - T[780-813] 5.8E-4 - T[814-847] 0.36 |
| Pfam |
RPAP3-like_C (IPR025986) - T[1033-1125] 7.1E-16 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RPAP3_HUMAN | 30.435 % | 87.4 | 2.02E-17 |
| SPAG1_HUMAN | 34.073 % | 325 | 2.94E-95 |
| TOM34_HUMAN | 32.888 % | 187 | 1.0E-52 |