Aniseed - Transcript Card

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S463.g10178.01.t

Possible name(s)

PSMC2; PSMC5; PSMC6

Gene model

Boleac.CG.SB_v3.S463.g10178

Location

S463 [10,607 / 11,456]

Sequences

Amino acid sequence

Length: 282

>Boleac.CG.SB_v3.S463.g10178.01.p
MRYLPREVDPLVYNMSHEDPGNVKYSEIGGLSEQIRQLREVIELPLLNPELFLRVGITPP
KGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARDHQP
CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLGQVKMIMATNRPDTLDP
ALLRPGRLDRKIQIELPNEQGRLDILKIHAAPITXHGEIDYEAVVKLSDGFNGADLRNVC
TEAGLFAIRAEREYVIQEDFMKAVRKLSENKKLETKLDYKPI

Nucleotide sequence

Length: 849

>Boleac.CG.SB_v3.S463.g10178.01.t
ATGCGTTATCTGCCGAGAGAGGTCGACCCGTTAGTGTACAATATGTCTCATGAAGACCCA
GGCAATGTGAAATATTCAGAAATTGGTGGTCTTTCTGAGCAAATTCGCCAGCTTAGAGAA
GTTATTGAGCTGCCATTGTTGAATCCTGAGCTTTTTCTACGAGTTGGAATCACCCCACCT
AAAGGTTGTCTACTCTATGGGCCACCNGGGACAGGAAAAACATTGCTAGCTAGGGCTGTC
GCTAGTCAGCTCGATGCAAATTTTTTGAAAGTGGTATCTTCTGCTATTGTCGATAAATAT
ATCGGAGAATCGGCCCGTTTGATTCGTGAAATGTTCAACTACGCTCGTGATCACCAGCCT
TGCATTATTTTCATGGATGAAATTGATGCCATCGGTGGAAGAAGGTTCTCGGAAGGCACA
AGCGCCGATCGAGAAATTCAACGTACATTAATGGAACTTTTGAACCAAATGGACGGCTTC
GACACNCTTGGTCAAGTGAAAATGATCATGGCGACNAATCGACCCGACACCCTTGACCCG
GCCTTGCTCCGACCTGGTCGTTTGGATAGAAAAATTCAAATTGAACTCCCAAACGAACAG
GGAAGATTAGATATTTTGAAAATACACGCTGCTCCAATCACCAANCATGGAGAAATTGAC
TACGAAGCTGTAGTGAAGCTCTCCGATGGGTTCAACGGCGCTGATCTACGAAATGTGTGT
ACGGAAGCCGGTCTCTTCGCGATTCGAGCCGAGCGAGAGTATGTCATTCAAGAAGATTTT
ATGAAAGCCGTCAGGAAGTTATCAGAGAATAAGAAGTTGGAAACAAAACTTGACTACAAG
CCAATCTGA

InterProScan

TIGRFAM	26S_Psome_P45-like (IPR005937) - T[4-267] 1.3E-115
SUPERFAMILY	P-loop_NTPase (IPR027417) - T[22-271] 1.03E-68
SMART	AAA+_ATPase (IPR003593) - T[59-198] 1.3E-20
Pfam	ATPase_AAA_core (IPR003959) - T[64-196] 7.2E-44
ProSitePatterns	ATPase_AAA_CS (IPR003960) - T[166-184] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
PRS7_HUMAN	56.061 %	323	2.31E-109
PRS8_HUMAN	54.887 %	300	5.68E-101
PRS10_HUMAN	90.426 %	536	0