Aniseed - Transcript Card

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S472.g10326.01.t

Possible name(s)

RPL17; RPL17-C18orf32

Gene model

Boleac.CG.SB_v3.S472.g10326

Location

S472 [2,820 / 5,006]

Sequences

Amino acid sequence

Length: 251

>Boleac.CG.SB_v3.S472.g10326.01.p
MRFQDLCPQELQVMLLRIIITLDEKAAHEDLAMQNAAMAASLIAAIIRLLCLYNLLYTVT
TRVAVRMVRYAQDPENPAKTCKARGSDLRVHFKNTRETAMAIKGMHVRKATQYLKDVIDK
KRCVPFRRFNKAVGRCAQAKAFGTTQGRWPKKSAQFLLQMLKNAESNAELKNLDVDSLVI
EHIQVNAAAKMRRRTYRAHGRINPYMSSPCHIEMFLTEREEVVPKSEEETQTKKKVSKKK
LARQKMMSGGE

Nucleotide sequence

Length: 756

>Boleac.CG.SB_v3.S472.g10326.01.t
ATGAGATTCCAGGATCTTTGTCCACAAGAGCTGCAAGTAATGTTACTAAGAATAATAATT
ACCCTAGACGAAAAAGCGGCACATGAAGATCTTGCTATGCAGAACGCCGCAATGGCTGCA
AGCTTGATTGCAGCAATCATCAGACTTCTGTGTCTCTACAATCTACTCTACACCGTAACT
ACAAGGGTGGCCGTCAGAATGGTTCGATACGCGCAAGATCCGGAAAACCCTGCCAAAACA
TGCAAGGCAAGAGGATCAGATTTAAGAGTTCACTTCAAGAACACTAGGGAAACAGCTATG
GCCATCAAGGGAATGCACGTCCGAAAGGCAACCCAGTACCTGAAGGATGTGATTGATAAA
AAGAGATGTGTGCCATTCAGAAGATTCAATAAGGCTGTCGGACGGTGTGCACAAGCAAAA
GCATTCGGGACCACCCAAGGTCGTTGGCCAAAGAAGAGTGCCCAGTTCTTGTTACAAATG
TTGAAGAATGCCGAGAGTAATGCTGAACTCAAAAATCTCGATGTGGACTCTTTGGTAATT
GAACATATTCAAGTCAATGCTGCTGCAAAAATGAGGCGAAGGACATACAGAGCTCACGGC
AGAATAAACCCATACATGAGCTCGCCATGCCACATCGAAATGTTTCTCACTGAACGGGAA
GAGGTGGTACCAAAGTCTGAGGAAGAAACCCAGACAAAGAAGAAAGTCTCCAAGAAAAAG
CTTGCTCGTCAAAAGATGATGAGCGGTGGAGAGTAA

InterProScan

Hamap	Ribosomal_L22/L17_euk/arc (IPR005721) - T[66-219] 24.354
Gene3D	Ribosomal_L22/L17_sf (IPR036394) - T[67-250] 2.9E-84
PANTHER	Ribosomal_L22/L17_euk/arc (IPR005721) - T[67-245] 1.7E-97
SUPERFAMILY	Ribosomal_L22/L17_sf (IPR036394) - T[67-218] 3.27E-60
TIGRFAM	Ribosomal_L22/L17_euk/arc (IPR005721) - T[70-218] 2.5E-65
CDD	Ribosomal_L22 (IPR001063) - T[81-216] 2.08414E-36
Pfam	Ribosomal_L22 (IPR001063) - T[83-216] 8.6E-43
ProSitePatterns	Ribosomal_L22/L17_CS (IPR018260) - T[192-216] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RL17_HUMAN	82.209 %	296	7.8E-103