- Transcript 'KH2012:KH.C9.38.v11....' >
- Transcript 'Cisavi.CG.ENS81.R25....' >
- Transcript 'Boleac.CG.SB_v3.S47....'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S47.g10263.01.t
Possible name(s)
ARNT; ARNT2; ARNTL
Gene model
Location
S47 [51,486 / 53,175]
Amino acid sequence
Length: 562
>Boleac.CG.SB_v3.S47.g10263.01.p
MDGKANGQMDDMSQADKERFARENHSEIERRRRNKMTAYITELSDMVPSCSALARKPDKL
TILRMAVTHMKQLRGSLPSGGLDSAYKPAFLTDQELKHLVLESADGFLFVASCETGQVVY
ISDTITSVLGQAHSDWLGRSIYELIHPQDIPKVQEQLSLNDQGGGRMLDLKTGTVKKEGQ
QSSVRMCNGSRRAFICRMRCGKIPSNNPTRYQRMRNTLGPNSKGEDPHAVMHITGHIKPW
PPTGYNGADGQPDGLEDMAAQNPNSSTDYCLVAIARLQVTSRPTFGDLNPTTDANEFVSR
HNFDHVYTFVDSRVTSILGYQPQELLGKTPADFYHPDDAEQAKENFKQVMLLRGQVFSMM
YRFRSQSGEYLYMRTSSFAFQNPYNNEIEYIVCTNSLVKPNQSQQPNRSVEDQHQEDKPI
QPYEQNYGSNAVESPGMQSPPANLNYGGQSNTGAQYNGPTGVSVMPQAGWNHNGMPNDSG
SQFSQAAIERYPGGVQQPHPSMYGVPNSSYQTSPMAGYAVDGCVPDSYPTQESMLPPVLD
QSGNTYGQEDFPDMFTYSQHQH
Nucleotide sequence
Length: 1,689
>Boleac.CG.SB_v3.S47.g10263.01.t
ATGGACGGCAAAGCAAACGGCCAAATGGACGACATGTCTCAAGCGGACAAGGAACGTTTT
GCACGAGAAAATCATTCTGAGATCGAGAGACGTCGTCGAAATAAAATGACAGCATATATA
ACAGAGCTATCTGACATGGTGCCGAGTTGTAGTGCACTGGCAAGAAAACCAGATAAGCTT
ACTATTCTACGGATGGCGGTAACTCACATGAAGCAACTGCGGGGGTCCCTGCCAAGTGGA
GGTCTGGATAGTGCATACAAGCCAGCCTTCTTAACTGACCAAGAACTAAAACACTTGGTA
TTGGAATCGGCGGATGGCTTCCTTTTTGTTGCGTCGTGTGAAACTGGGCAAGTTGTCTAC
ATTTCTGATACCATCACATCTGTCCTTGGACAGGCACATTCTGATTGGCTAGGCCGAAGT
ATCTATGAACTTATACACCCACAAGATATACCAAAAGTACAAGAGCAGCTTAGCCTCAAT
GATCAAGGTGGCGGGCGGATGCTGGACCTCAAAACTGGAACTGTTAAAAAAGAAGGACAG
CAAAGTTCTGTCAGAATGTGTAATGGGTCAAGGCGAGCATTTATTTGTCGTATGAGATGT
GGTAAAATTCCTTCCAACAACCCTACAAGGTATCAACGTATGAGAAACACACTTGGCCCT
AATTCCAAAGGCGAAGACCCTCATGCAGTTATGCACATAACAGGTCACATAAAGCCATGG
CCACCCACAGGATACAATGGTGCAGATGGCCAGCCAGATGGCCTAGAAGATATGGCTGCT
CAGAATCCCAATTCATCAACTGACTATTGCTTGGTAGCGATTGCAAGGCTACAGGTGACG
AGTCGGCCCACATTTGGTGATTTAAATCCTACAACAGATGCTAACGAATTTGTATCTCGA
CACAATTTTGATCATGTGTACACCTTTGTTGATTCAAGAGTAACGAGCATCCTTGGATAT
CAGCCTCAAGAACTCTTAGGAAAGACCCCAGCAGATTTTTACCATCCAGATGATGCAGAA
CAAGCAAAAGAGAATTTTAAGCAAGTTATGCTTCTCAGAGGTCAAGTCTTTTCAATGATG
TATCGGTTCAGATCACAAAGTGGGGAGTATCTCTACATGAGAACGAGCTCTTTCGCATTT
CAAAATCCTTATAATAATGAAATTGAATACATCGTTTGCACAAACTCGCTTGTCAAGCCA
AACCAGTCACAACAACCTAACAGATCGGTTGAAGATCAACACCAGGAAGATAAACCCATC
CAACCATACGAACAAAATTATGGCTCAAATGCTGTAGAGTCTCCGGGCATGCAATCACCA
CCTGCTAATCTAAACTATGGCGGCCAAAGTAATACAGGAGCACAGTATAATGGCCCGACA
GGTGTCTCAGTAATGCCTCAAGCAGGATGGAATCACAATGGAATGCCAAATGATAGTGGA
TCACAGTTTTCACAAGCAGCTATTGAACGCTACCCAGGTGGTGTGCAACAACCCCACCCA
TCAATGTATGGTGTTCCCAACAGTTCATATCAAACATCGCCGATGGCTGGTTATGCAGTT
GATGGCTGTGTTCCAGACTCATACCCAACTCAAGAATCAATGCTACCGCCTGTATTGGAT
CAAAGTGGCAACACGTATGGGCAAGAAGATTTTCCAGACATGTTCACATATTCTCAGCAT
CAGCATTGA
| Gene3D |
HLH_DNA-bd_sf (IPR036638) - T[9-76] 1.4E-21 |
| ProSiteProfiles |
bHLH_dom (IPR011598) - T[20-73] 16.717 |
| CDD |
bHLH_dom (IPR011598) - T[22-77] 4.93757E-15 |
| Pfam |
bHLH_dom (IPR011598) - T[22-73] 1.0E-14 |
| SUPERFAMILY |
HLH_DNA-bd_sf (IPR036638) - T[22-105] 5.76E-15 |
| SMART |
bHLH_dom (IPR011598) - T[26-79] 3.5E-14 |
| PRINTS |
Nuc_translocat (IPR001067) - T[35-50] 5.4E-73 - T[55-75] 5.4E-73 - T[86-109] 5.4E-73 - T[111-130] 5.4E-73 - T[143-161] 5.4E-73 - T[188-201] 5.4E-73 - T[228-247] 5.4E-73 - T[296-313] 5.4E-73 |
| ProSiteProfiles |
PAS (IPR000014) - T[93-164] 15.318 - T[308-353] 13.998 |
| SMART |
PAS (IPR000014) - T[95-162] 4.2E-11 - T[283-351] 1.2E-5 |
| Pfam |
PAS_fold (IPR013767) - T[99-200] 1.3E-10 |
| CDD |
PAS (IPR000014) - T[104-192] 2.55404E-10 - T[294-392] 6.6965E-15 |
| SUPERFAMILY |
PAS-like_dom_sf (IPR035965) - T[105-231] 1.54E-13 - T[295-396] 1.05E-26 |
| TIGRFAM |
PAS (IPR000014) - T[308-387] 1.6E-8 |
| SMART |
PAC (IPR001610) - T[358-401] 0.0087 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARNT_HUMAN | 57.971 % | 494 | 1.5E-167 |
| ARNT2_HUMAN | 57.538 % | 477 | 1.95E-161 |
| BMAL1_HUMAN | 40.15 % | 311 | 1.3E-98 |