- Region 'REG00001084' >
- Molecular Tool 'Hr-FGF9/16/20 MO (Kumano 2006)' >
- Transcript 'KH2012:KH.C6.71.v2.A...' >
- Transcript 'Boleac.CG.SB_v3.S48....'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S48.g10436.01.t
Possible name(s)
EN1; EN2; MSX1
Gene model
Location
S48 [269,891 / 270,956]
Amino acid sequence
Length: 163
>Boleac.CG.SB_v3.S48.g10436.01.p
MSTGGMPDFLIDTILGINRKPDVDERNKNVSPLRDTSDTHLSENKGCKEGLPAWIFCTRY
SDRPCSGPRTRKKRSPTSRIKDHKRVVFTSEQTKTLEDEFRESCYLSECRRKDLSAALNL
KESQIKVWFQNKRAKVKKHSEKTNCLADRLRAQGLYNHSGKCC
Nucleotide sequence
Length: 492
>Boleac.CG.SB_v3.S48.g10436.01.t
ATGAGTACGGGTGGTATGCCAGACTTTCTTATAGATACGATTCTCGGTATTAATAGGAAA
CCGGACGTTGACGAAAGAAACAAGAATGTATCGCCTCTTCGTGATACGTCAGACACACAT
CTGAGCGAAAATAAAGGTTGCAAGGAGGGGCTCCCGGCGTGGATATTTTGCACAAGATAC
TCTGACAGACCATGCTCCGGACCTCGTACAAGAAAGAAGCGATCACCAACTTCCAGAATC
AAAGACCATAAACGCGTGGTGTTCACCAGCGAACAAACGAAAACTCTCGAAGACGAATTT
CGTGAAAGCTGCTACCTTTCTGAATGTCGACGGAAAGATTTGAGTGCAGCCCTTAACTTG
AAGGAGTCTCAAATTAAAGTGTGGTTTCAAAACAAAAGGGCCAAAGTGAAAAAGCACAGT
GAAAAGACCAACTGTTTAGCTGATCGACTGAGAGCACAAGGGCTTTACAATCATTCTGGA
AAGTGCTGTTGA
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[72-139] 1.2E-20 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[79-139] 18.301 |
| SMART |
Homeobox_dom (IPR001356) - T[81-143] 6.7E-20 |
| Pfam |
Homeobox_dom (IPR001356) - T[84-138] 2.0E-20 |
| CDD |
Homeobox_dom (IPR001356) - T[84-140] 2.14123E-16 |
| PRINTS |
Homeobox_metazoa (IPR020479) - T[103-114] 5.5E-5 - T[118-128] 5.5E-5 - T[128-137] 5.5E-5 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[114-137] . |
| Pfam |
Homeobox-engrailed_C-terminal (IPR019549) - T[144-159] 7.6E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HME2_HUMAN | 55.963 % | 127 | 2.73E-36 |
| HME1_HUMAN | 55.963 % | 122 | 9.33E-34 |