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  1. Clone 'cieg051b12' > 
  2. Transcript 'KH2012:KH.S494.5.v1....' > 
  3. Clone 'AHC0AAA241YM14' > 
  4. Transcript 'KH2012:KH.C6.283.v1....' > 
  5. Transcript 'Boleac.CG.SB_v3.S493...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S493.g10655.01.t

Possible name(s)

THBS1; THBS2; THBS3

Gene model

Boleac.CG.SB_v3.S493.g10655

Location

S493 [69,777 / 83,125]

Sequences

Amino acid sequence

Length: 1,283

>Boleac.CG.SB_v3.S493.g10655.01.p
MLKQMTSSTLLRVISCLLALALTTCANLSGKSHDVFTMTGLIHKMDRTSLKFIKRIASFD
EFLPAYKFKRPSSSLGLVASDNEFNRLSHAIVENDGEFVLFMSIRXDYNKKGTLLSIVPK
NDDIDVFGDNLEIVADPPHSRLAIYGTINGQTISMASTTQSMQDQTLWRHFALVISHTEI
NVYDGCEHADTFELSEPLDRIFNSNSHSLHLAAGYRMSRDYRGSIARMRFYVGADVTEVL
SEEIGCDAPVPRHPATDSTATKRTRVFEPPIKPVDGVCGMTCDELKQIPTYRPPSAHMGR
PPLTMDFPGCWDDTTRHDDGDQWKKDDCQICNCTAGKIVCIREVCEPLHCIDIVRVEGQC
CPECASDADGYSQWSDWTPCSVTCGIGQQQRGRACDQVKFQCSLKTKESRNCVMEPCDRK
IKLDGKWSXWSPWSSCDVSCGSGFITRIRECNSPSPQHGGKDCEGERRQNKPCTQPNCPI
DGQWGPFSPYDQCTATCGEGTKTRTRQCDSPPPQFGGKECRGGNSETVPCNERPCPINGG
WSPWSKYGPCSASCGYAQKTRVRTCNNPTPQYGGEDCVGQSSEVKQCKRHPCPIHGGWGP
FSPYSMCSRSCGGGYKKRFRECNNPLPKHGGKNCRGDKHEVEICNEQPCPIDTCALRSPC
YPGVTCTPFDDGSYECGNCPAGMQGNGENCTDINECQLVPDACFHYEEKTRCHNYPGGYS
CMPCPAGHEGDAPTGTGVEYATEHKQTCEVINPCTDGSNPCSENAECIFLGLAITPPFMC
KCHPGFSSCDACSGLVCAEDTDLDGIPDSEVRCTKDGINATCAKDNCRTLPNSGQENADG
DEWGDACDXDKDNDGVLEPKDNCPLVHNPSQHDSDRDLVGDVCDNCPFLRNEDQIDTDGD
GVGDACDNDIDGDGIINEDDNCVYISNVDQLDTDNDNVGDVCDNCKYEANADQRDTDSDR
VGDACDTDLDRDNDGIQDDLDNCPYIPNSGQADHDGDGLGDDCDPDDDNDGILDGADNCR
LIPNPDQIDSNGXGRGDACENDFDGDGVLDFEDACMENALITKTDFTKFDKVKLDPRGDA
QVDPKWMIRHKGKEILQTKNCDPGLAIGRDMFAGVDFEGTFFINTNKDDDYAGFVFGYQS
SKRFYVLMWKQVTQSYWKAYPREANGNAGLQLKVVESETGPGEHLRNALWHTGNTPGQVR
TLWTDTQFQGWKDYTAYRWMLNHRPATGEIRIKMYEGRDLLVDSGPIADNTYAGGRIGMF
VFSQEMVFFSDMDYKCNDSSMNL

Nucleotide sequence

Length: 4,963

>Boleac.CG.SB_v3.S493.g10655.01.t
TGTAGCGCGGGTAAGTCAGTCGTGAACGAGGCCGCTTTCGTGTAAAGGTTTGCCTCATCG
TGGATACAGTAACGAAGGCNTGCGGGATTTCAATATAAAGATCCCATACCGACTGGATTA
ATTAGAATTTGACGCTGTCACTCTGCATTACTTGCAGGTGTTTTAACACTTCGACTTCAT
AAAATTAATTTTACTTGAAGAAACATCGCACCCTTTGGGTAAAAGCAATGTTGAAGCAAA
TGACCAGCTCGACGTTGTTGAGAGTTATAAGTTGCCTGCTTGCACTTGCCTTAACAACAT
GTGCAAACTTATCAGGGAAGAGCCATGACGTGTTCACCATGACCGGTTTGATTCACAAAA
TGGACAGAACGTCTTTAAAGTTTATCAAACGGATAGCAAGCTTTGACGAATTTCTCCCAG
CCTATAAATTTAAACGACCAAGTTCCTCATTGGGACTGGTGGCTTCTGATAACGAATTCA
ATCGCCTTTCGCATGCAATCGTGGAGAACGACGGCGAGTTTGTGTTGTTCATGTCGATAA
GAAANGACTACAACAAAAAAGGCACCCTTTTGTCAATCGTCCCGAAGAACGATGACATTG
ACGTGTTTGGAGACAATTTGGAGATCGTTGCCGACCCGCCCCATTCTCGTTTGGCTATCT
ATGGTACTATTAACGGTCAAACCATTTCAATGGCTTCAACTACTCAATCCATGCAAGACC
AAACATTATGGAGGCATTTTGCGTTGGTGATATCTCATACTGAGATAAATGTCTACGACG
GGTGCGAACATGCGGACACTTTTGAACTGAGTGAACCATTGGATCGCATATTCAATTCAA
ACAGTCATTCATTGCATCTTGCTGCAGGATATCGAATGAGCAGGGATTACAGGGGATCAA
TAGCAAGAATGCGATTTTATGTTGGTGCGGACGTGACAGAAGTTCTATCAGAAGAGATCG
GCTGTGATGCACCTGTTCCTCGTCACCCAGCCACTGATTCAACAGCGACAAAACGAACTC
GAGTTTTTGAACCGCCAATAAAACCGGTGGATGGGGTTTGCGGAATGACATGCGACGAAT
TGAAACAAATTCCAACCTACAGACCACCTTCAGCACATATGGGACGTCCTCCACTGACCA
TGGATTTTCCTGGGTGTTGGGATGATACTACTCGACACGATGACGGTGATCAATGGAAGA
AAGACGATTGTCAAATTTGCAACTGTACTGCCGGAAAAATCGTTTGTATCAGAGAAGTAT
GTGAGCCGCTACATTGCATCGACATCGTTCGTGTTGAAGGTCAATGTTGTCCAGAATGTG
CGAGCGATGCAGACGGGTATTCTCAATGGTCTGACTGGACTCCGTGCTCCGTTACCTGCG
GTATCGGACAACAACAAAGAGGAAGAGCTTGTGATCAAGTCAAATTTCAATGCAGCTTAA
AAACAAAGGAATCACGAAACTGTGTCATGGAGCCATGCGACCGAAAAATAAAACTTGATG
GTAAATGGTCATTNTGGTCTCCATGGAGTAGCTGTGACGTGTCTTGTGGAAGTGGCTTCA
TCACGAGGATAAGAGAATGCAACTCCCCTTCCCCACAGCATGGCGGAAAAGATTGCGAAG
GAGAGAGACGACAGAACAAGCCATGTACTCAACCCAATTGCCCAATTGACGGACAGTGGG
GACCATTTTCACCCTACGATCAATGCACCGCAACCTGCGGAGAAGGGACAAAGACAAGAA
CAAGACAGTGTGATAGCCCGCCTCCACAATTTGGCGGGAAAGAATGTCGCGGAGGTAACA
GCGAAACAGTACCTTGCAATGAGAGGCCCTGCCCGATCAACGGCGGCTGGTCCCCATGGT
CAAAATATGGGCCTTGTAGTGCATCGTGTGGATACGCGCAGAAAACACGAGTCCGCACTT
GCAATAATCCAACACCGCAGTATGGGGGTGAAGACTGTGTCGGACAATCCAGTGAAGTTA
AACAGTGCAAAAGACATCCTTGTCCTATTCATGGTGGTTGGGGACCATTCAGTCCATATT
CTATGTGCTCAAGATCATGCGGTGGTGGGTACAAGAAACGTTTCAGAGAATGCAACAATC
CCCTGCCAAAACACGGCGGTAAAAATTGTCGAGGAGACAAGCACGAAGTTGAGATCTGCA
ATGAGCAACCCTGTCCAATCGATACATGCGCACTTAGAAGTCCCTGTTACCCTGGAGTTA
CTTGTACTCCGTTTGACGATGGATCATACGAATGTGGAAATTGTCCAGCAGGGATGCAGG
GAAATGGGGAAAACTGCACCGATATTAATGAGTGTCAACTCGTACCAGATGCTTGCTTTC
ATTACGAAGAGAAGACCAGGTGCCATAATTATCCGGGCGGGTACTCTTGCATGCCATGCC
CAGCCGGGCACGAAGGCGATGCTCCTACCGGCACTGGAGTGGAATATGCTACTGAACATA
AGCAAACATGTGAAGTGATCAACCCGTGCACTGATGGATCTAATCCTTGTTCTGAAAATG
CTGAGTGCATTTTCCTTGGTCTTGCGATTACTCCGCCATTTATGTGTAAGTGCCATCCGG
GATTCTCCTCCTGCGACGCTTGCAGTGGATTGGTCTGTGCTGAAGACACTGATTTGGATG
GAATTCCTGACTCAGAGGTCAGGTGCACGAAAGATGGAATCAACGCCACCTGTGCCAAAG
ATAACTGCAGAACACTACCCAACAGTGGACAAGAAAATGCCGACGGCGACGAATGGGGAG
ATGCGTGCGATNTAGACAAAGACAATGATGGGGTTCTTGAACCAAAGGACAACTGCCCGC
TAGTCCACAACCCATCACAACATGATTCCGATCGTGATCTGGTTGGTGACGTCTGCGACA
ACTGTCCGTTCTTACGCAACGAAGATCAGATTGACACGGATGGCGACGGTGTGGGAGATG
CCTGCGACAATGATATCGACGGAGATGGCATTATAAACGAAGACGACAATTGCGTATACA
TCAGCAACGTCGATCAACTGGACACCGACAATGACAACGTAGGGGACGTATGTGACAATT
GTAAATATGAAGCTAACGCTGATCAGAGAGACACTGACTCAGATCGTGTTGGTGACGCAT
GTGACACTGATCTTGACCGAGATAACGATGGAATTCAAGACGATTTGGATAACTGCCCTT
ATATACCTAACAGTGGACAAGCAGATCACGATGGTGACGGTTTAGGAGACGACTGCGACC
CTGATGACGACAACGATGGCATTCTTGACGGTGCAGATAACTGCAGACTTATTCCAAACC
CTGATCAAATAGATTCAAATGGCAANGGTCGAGGAGATGCGTGTGAAAACGATTTTGACG
GAGATGGAGTACTTGATTTCGAAGACGCGTGCATGGAAAACGCTTTAATTACAAAAACTG
ACTTCACAAAATTCGACAAAGTCAAATTGGATCCAAGAGGCGACGCTCAAGTCGATCCTA
AGTGGATGATCAGACACAAAGGAAAGGAAATTCTACAAACCAAAAATTGCGATCCNGGTC
TTGCTATCGGACGAGATATGTTTGCGGGTGTGGATTTCGAAGGCACATTTTTCATAAACA
CAAACAAAGACGATGATTACGCGGGATTCGTTTTCGGCTACCAATCCTCAAAACGATTTT
ATGTGCTGATGTGGAAACAAGTAACGCAAAGCTACTGGAAAGCATATCCCAGAGAAGCGA
ACGGAAACGCTGGCCTGCAATTGAAGGTCGTGGAATCTGAAACTGGCCCGGGCGAACATC
TCAGGAATGCACTTTGGCACACTGGAAACACACCAGGACAGGTCCGAACTTTGTGGACGG
ACACCCAATTCCAAGGCTGGAAAGACTATACCGCTTACAGGTGGATGTTGAACCATAGAC
CGGCGACAGGAGAGATAAGGATCAAAATGTACGAAGGCAGAGATCTACTGGTGGACTCTG
GGCCGATTGCAGACAATACGTACGCCGGCGGTAGAATAGGAATGTTCGTATTTTCACAGG
AGATGGTATTTTTTTCGGACATGGATTACAAATGCAATGATTCTTCAATGAACTTGTAGT
ACATACAAAAGCATTGATCACTGGTTGATCGGTTATACACGGACAAGACTCAACGCTTGT
GAAACAAAGAGATCGTTGCAGTAACAAACAAAGTTGAACAATCTATACGCATTCAGGGTG
CACAGTCACTCAAAATGCCTGCGCCATGCCACGCTATGCCCGACAACTTGATTTAATATC
ATTTGACATCTGGCTACAAACCATGGATATAAAGAATACATCCTGCACTATTCAAGAATT
AGGCATACAGTCTAGGCCTATATACGTGACTTATTCACCGTTGAATTTATATTGCACCAT
GCAGATTTTCAGCTACATTTAAATTTTTCCGCTCTTCTCTTATTTCAATTTGATTTATTT
GGCTTTATTTATATTGCATTGCCTGTTTTCTTACGTTCCTTGTTGAATTTACCTATCACT
GATGATCGTCATCCCGNATGACTGAAGGAATTTGTAGGCCTATGGCGTATACCAGGGATT
TCTAGAAGCACTCTTTAGATATCCCTGGCAGACACTCACAATATTCTGACGTGACGATTT
GCCGTGTGACGGCCATCATGTTGATGCAATGAATAGCACAGTCGAGATTTCTAACCAATT
TTGTGAAGCATTCACAGCAAAATCGGACTTTCAAACGGTCAGTGAGCACCACTATACAGT
ATAGCATAGGCCTACGCATTCTCGATGGCCTGTATGTGCCATTTAACAACGAGTCACTCG
ACCAATACGCTAAACACAAATTAGCAGTTGTCAACCTGACGCTATGTTCTTGTTAAATCG
CAACGGAGCAATGAAGTACACAGTTAAGTCAAAATGTTAGTTTTCTTCATTCAATAAATG
TTCAAATTTCCATTCATGACGATTTCCGATTTGAAATTAGATT

InterProScan

PANTHER
Thrombospondin (IPR037349) - T[13-250] 0.0 - T[301-418] 0.0 - T[425-452] 0.0 - T[454-482] 0.0 - T[484-509] 0.0 - T[512-539] 0.0 - T[539-566] 0.0 - T[568-596] 0.0 - T[597-623] 0.0 - T[626-1279] 0.0
SUPERFAMILY
ConA-like_dom_sf (IPR013320) - T[53-246] 7.91E-11 - T[1064-1278] 4.27E-96
ProSiteProfiles
VWF_dom (IPR001007) - T[308-365] 10.79
SMART
VWF_dom (IPR001007) - T[310-364] 7.2E-9
Pfam
VWF_dom (IPR001007) - T[310-364] 7.3E-8
ProSitePatterns
VWF_dom (IPR001007) - T[328-364] .
Gene3D
TSP1_rpt_sf (IPR036383) - T[368-417] 3.1E-10 - T[424-478] 1.1E-18 - T[479-535] 2.4E-17 - T[536-592] 6.3E-18 - T[593-649] 3.2E-19
ProSiteProfiles
TSP1_rpt (IPR000884) - T[369-418] 12.168 - T[424-479] 14.271 - T[481-536] 13.561 - T[538-593] 13.044 - T[595-650] 13.848
SUPERFAMILY
TSP1_rpt_sf (IPR036383) - T[370-417] 1.96E-9 - T[424-474] 1.83E-14 - T[480-531] 8.5E-14 - T[534-592] 8.37E-14 - T[591-649] 2.35E-15
SMART
TSP1_rpt (IPR000884) - T[371-418] 7.4E-12 - T[427-479] 5.5E-15 - T[484-536] 4.0E-15 - T[541-593] 4.8E-11 - T[598-650] 2.3E-16
Pfam
TSP1_rpt (IPR000884) - T[372-417] 2.6E-11 - T[428-478] 1.4E-13 - T[485-535] 6.9E-11 - T[542-592] 6.2E-10 - T[599-649] 1.3E-11
ProSiteProfiles
EGF-like_dom (IPR000742) - T[650-691] 9.65 - T[750-790] 11.247
SMART
EGF-like_Ca-bd_dom (IPR001881) - T[650-691] 0.021 - T[692-749] 8.9E-6
SMART
EGF-like_dom (IPR000742) - T[653-691] 0.011 - T[695-749] 17.0 - T[753-793] 0.12
Pfam
EGF-like_Ca-bd_dom (IPR001881) - T[692-729] 8.5E-7
Gene3D
TSP_type-3_rpt (IPR028974) - T[783-883] 4.6E-21 - T[884-942] 1.3E-19 - T[943-1064] 9.4E-44
SUPERFAMILY
TSP_type-3_rpt (IPR028974) - T[798-884] 1.31E-11 - T[861-943] 3.66E-16 - T[941-1062] 1.22E-35
ProSiteProfiles
Thrombospondin_3_rpt (IPR017897) - T[799-835] 11.338 - T[836-871] 16.519 - T[872-894] 10.693 - T[895-930] 17.887 - T[931-953] 10.724 - T[954-991] 16.768 - T[992-1027] 16.993 - T[1028-1063] 13.752
Pfam
Thrombospondin_3-like_rpt (IPR003367) - T[838-871] 3.8E-9 - T[872-894] 0.0033 - T[896-930] 6.3E-11 - T[931-953] 0.015 - T[954-991] 1.9E-12 - T[993-1027] 4.8E-7 - T[1029-1061] 3.5E-9
ProSiteProfiles
Thrombospondin_C (IPR008859) - T[1067-1281] 93.047
Pfam
Thrombospondin_C (IPR008859) - T[1081-1278] 7.5E-92

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TSP1_HUMAN 58.344 % 907 0
TSP2_HUMAN 55.228 % 841 0
TSP3_HUMAN 50.149 % 574 0





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