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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C2.712.v1....' > 
  2. Transcript 'KH2012:KH.S534.1.v2....' > 
  3. Clone 'cien90079' > 
  4. Clone 'citb104b06' > 
  5. Transcript 'Boleac.CG.SB_v3.S499...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S499.g10704.01.t

Possible name(s)

MOSPD2; VAPA; VAPB

Gene model

Boleac.CG.SB_v3.S499.g10704

Location

S499 [66,581 / 71,402]

Sequences

Amino acid sequence

Length: 196

>Boleac.CG.SB_v3.S499.g10704.01.p
MSRQKQPQVLKIEPPNELKFQVKTTAPRRYCVRPNSGFIDSNASITISVMLQPFDSDPSE
LLKHKFMVQTMFAPTTSDDLESLWKEANPADLMDSKLKCVFEQPNEQGQGKLVEEKEPDS
PPPPSGESASELQPIMEEQKRLQSLVAKLKLENEQLKSRSEGGDVKEGMAAQQKRIILIF
LIVAFVTGISLGYILS

Nucleotide sequence

Length: 1,214

>Boleac.CG.SB_v3.S499.g10704.01.t
TGTATTTGCAGAATATTTTACTCATCACTGGGAATTTGNTAACATCATTTGGGTGATTTT
GAATATATATAGGTAATGTCTCGACAAAAGCAGCCCCAAGTGTTGAAAATTGAACCTCCC
AATGAGCTAAAATTTCAGGTCAAGACAACAGCACCAAGACGATACTGTGTTCGCCCCAAC
AGTGGCTTTATCGATAGCAATGCTTCCATTACCATATCGGTGATGCTACAGCCGTTTGAC
TCAGATCCGAGCGAGTTGCTTAAACACAAGTTCATGGTGCAGACGATGTTCGCTCCGACA
ACTTCCGATGACTTGGAAAGCCTGTGGAAAGAGGCGAATCCCGCAGATCTGATGGACTCG
AAGTTGAAATGTGTCTTTGAGCAACCTAACGAACAGGGTCAAGGAAAACTGGTTGAGGAA
AAAGAACCTGACTCGCCACCGCCACCATCTGGAGAGTCGGCGTCCGAGCTGCAACCGATC
ATGGAGGAACAGAAGCGCTTGCAATCGCTCGTCGCTAAACTGAAACTGGAGAATGAACAA
CTGAAGAGTCGATCGGAAGGAGGAGACGTGAAGGAAGGCATGGCAGCTCAACAGAAGCGA
ATCATTTTGATCTTCTTGATTGTTGCTTTTGTGACCGGCATCTCTCTCGGATACATTCTC
TCTTAACTCTGGTGCAGTTTCAAGTTTTTGCAATTTTTCAAATGGAAATAGTTTTATCTT
CAACGGACTCTCAACACTGACGGCTGTTCTGGTGACGGTATGCCAGCAGCGTGATCTATA
CCCTCCCTTATTGTATTCCACCGAAATTTATGCTCAAGTAATCGTGGGCTGGTCCTAGGA
GGCAGCTTTCAACACTTGACAAATCTTGTCAACCGTGTCATCCGCCATGTTAATGAATCC
ATCAGTCAGCCGCCTGTAATCAAGTTACTGCTTGTGGTACGCTTGTAGAAAAACAATTTG
CCGTTTCGATGAAGTCTCGATATCTAGGTTAGCTGTGAAAACTTTGACGGCCGACATTCG
ATGATGATGTTGCCGTCCATTGAGCCGACAGTGCTCTGTGCTGCCATCTCGTGAGTAATC
ATCAAACAACCGTGCGTGCANATGTAAAAAATGTATTGTATTCGCGATTACCATGTTTCG
TGTTATTTGAAGGATTTGGTTGCATTATATTGTCTTGCTGTTCTGAAACTGCCGGGGAAT
CGTCTGAACAGGGG

InterProScan

ProSiteProfiles
MSP_dom (IPR000535) - T[1-102] 21.138
Gene3D
Ig-like_fold (IPR013783) - T[2-106] 2.0E-35
SUPERFAMILY
PapD-like_sf (IPR008962) - T[6-109] 3.92E-28
PIRSF
VAP (IPR016763) - T[7-133] 1.0E-34 - T[111-196] 0.14
PANTHER
VAP (IPR016763) - T[10-158] 1.4E-50
Pfam
MSP_dom (IPR000535) - T[16-85] 1.0E-18

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
VAPA_HUMAN 52.663 % 158 1.08E-48
VAPB_HUMAN 41.597 % 167 2.62E-52