Aniseed - Transcript Card

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S49.g10579.01.t

Possible name(s)

TNXB

Gene model

Boleac.CG.SB_v3.S49.g10579

Location

S49 [144,024 / 145,554]

Sequences

Amino acid sequence

Length: 297

>Boleac.CG.SB_v3.S49.g10579.01.p
MRLKSLARVDQEGVANDSSNNPYFHNTAVQNLSTSCYDVTLDSAKIRSVTGGVYDIYIPP
AVGWTEVYCDMTTDGGNWIKSGRHLTFSYAANRNDIDLFLQQVFQRRMDGSVDFYRGWED
YVSGFGDVTKEFWLGKLSTGKGLQSLVPTPFRGLEAIHQLTRHGEYELRIDMIERDGTRY
YAKYSDFKVGPSSDNYRLTVSGYSGNSSDAFANPPDQWGMLNGQQFSTKNADNNIWDDHC
AVRYTGAWWYKNCLSSNLNGVYGNREDWGGVTWYDSLHRKSYWRIHLEFTEMKFRKK

Nucleotide sequence

Length: 891

>Boleac.CG.SB_v3.S49.g10579.01.t
ATGCGATTGAAATCACTGGCCCGTGTTGACCAGGAGGGCGTAGCAAATGATTCATCTAAC
AATCCGTATTTTCATAACACAGCCGTGCAGAATTTATCTACAAGCTGCTATGACGTAACA
CTTGATTCTGCGAAAATTCGCAGCGTCACGGGGGGCGTCTATGACATTTACATCCCGCCA
GCGGTCGGATGGACCGAAGTCTATTGTGACATGACAACCGATGGCGGGAACTGGATTAAG
TCGGGTCGTCATTTGACATTCTCGTACGCAGCGAACCGTAACGACATCGACCTGTTCTTG
CAACAGGTTTTCCAACGAAGAATGGATGGAAGTGTTGACTTTTATCGGGGATGGGAGGAT
TACGTCAGTGGATTCGGCGACGTCACAAAAGAATTTTGGCTCGGTAAGCTTTCCACGGGA
AAAGGATTGCAGTCGCTTGTGCCGACTCCGTTTCGGGGACTGGAAGCTATACATCAGCTT
ACGAGACACGGCGAATACGAGCTGAGGATTGACATGATCGAGAGGGACGGGACTCGTTAC
TATGCGAAGTATAGCGATTTCAAAGTGGGACCGTCCTCCGATAACTACAGGCTAACCGTG
AGTGGGTACTCTGGAAACTCATCGGATGCATTCGCAAACCCACCAGACCAGTGGGGCATG
TTAAACGGGCAACAATTCTCAACTAAGAACGCTGACAACAACATCTGGGATGATCACTGT
GCCGTGAGATATACAGGAGCGTGGTGGTACAAGAACTGCCTGTCCAGCAACCTGAACGGC
GTCTACGGCAATCGAGAAGACTGGGGCGGCGTCACGTGGTACGATAGCCTGCACAGAAAA
TCTTACTGGCGCATCCACTTGGAATTCACGGAAATGAAATTTAGGAAGAAG

InterProScan

Gene3D	Fibrinogen_a/b/g_C_1 (IPR014716) - T[4-218] 9.1E-45
ProSiteProfiles	Fibrinogen_a/b/g_C_dom (IPR002181) - T[27-297] 38.613
SUPERFAMILY	Fibrinogen-like_C (IPR036056) - T[29-295] 3.53E-61
SMART	Fibrinogen_a/b/g_C_dom (IPR002181) - T[31-297] 2.4E-64
CDD	Fibrinogen_a/b/g_C_dom (IPR002181) - T[32-297] 2.41773E-81
Pfam	Fibrinogen_a/b/g_C_dom (IPR002181) - T[103-295] 2.9E-42
Gene3D	Fibrinogen_a/b/g_C_2 (IPR014715) - T[219-282] 4.1E-16
ProSitePatterns	Fibrinogen_CS (IPR020837) - T[248-260] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
TENR_HUMAN	37.6 %	155	2.46E-42
TENX_HUMAN	38.095 %	164	1.8E-45
FBCD1_HUMAN	35.821 %	145	2.48E-40