- Transcript 'Boleac.CG.SB_v3.S50....'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S50.g10811.01.t
Possible name(s)
EEA1; RBSN; ZFYVE28
Gene model
Location
S50 [117,688 / 125,726]
Amino acid sequence
Length: 721
>Boleac.CG.SB_v3.S50.g10811.01.p
MARSISSNDGIEGFLCPMCMTDLHSFHNLQKHFESKHSNEDKDIFNQIKGAFSKAKEKIF
SKEPEGTDSVGLTDVIPERPGTISNTDFDASFWEPQEIGVIRQRSEEFRSIRDARIDRTV
VETNRIIIRLGKMLQLPESVSSKRKEYEKTLVPWVADEDVPFCPTCGAKFNIARRRHHCR
LCGAIMCSKCSIFLSIKEAEDIIEKNNQAYSGTPDHRKVNQPSLPPFTEEEIDKIRVRVC
VECDKVLQKNREKLNLQLESSLLVLLHTKMMTAMETAITQTPEFLIMAESLNKGEEDYQL
DVAMDKRIKLMQAYEAVDVISKKIAALSADDEEHPLSRGAARLQKYEKTLVPWVADEDVP
FCPTCGAKFNIARRRHHCRLCGAIMCSKCSIFLSIKEAEDIIEKNNQAYSGTPDHRKVNQ
PSLPPFTEEEIDKIRVRVCVECDKVLQKNREKLNLQLESSLLVLLHTNNMLSLPSLPSAP
KLLVLQSRRRAEHEKKLRRQREEAQRLREEQRRQQEIERLKLERDLFQQKRKDRGQESVL
LSTHDDKPEASERVGAVAVVRDPGWSADTIRPKPKDPSSSPGHGNPFEISGDESDENDDD
TLEPLKEQISYVSESLKQAQAAGMXSEVQSLERNLKELQFEYKKQKTIRAFRSSTYEKLS
YNASSKDDSSNLDGEEDVIRHQINYIAKCINEARAAGKTDEVQMLAENLNEMKLLYDKLH
K
Nucleotide sequence
Length: 2,563
>Boleac.CG.SB_v3.S50.g10811.01.t
CGTTTATTCACATCTCCATTGCTCATTGCCGAAGATCGGCTCCGGATTTTCAGTAACTCA
TCACTGCAGCAAAGCCGAAGTGCGAAGAGCTGGAAACCGAGGAAAGCTAGCAGTTGGGGG
TGAGCTATTCAGCATACACCACAGGCACCGNGCTGTTATGGAGAGGATTTAATAGTAAAG
AAAACCATGAATGTAACGACATGACAATCTGCTGAATCCTGTGGTAACAGGTGGTCGAGG
AGGAGAACCGTAAAGAAACGGAAATGGCCAGGTCGATTTCATCCAACGATGGAATCGAGG
GCTTTCTTTGCCCGATGTGTATGACGGATCTACATTCTTTTCACAACTTACAAAAGCACT
TCGAGAGTAAGCATTCAAATGAGGACAAAGATATCTTCAATCAGATAAAAGGAGCCTTCT
CAAAAGCTAAAGAAAAAATTTTCAGCAAGGAACCCGAAGGCACTGATTCTGTGGGATTGA
CCGATGTGATTCCTGAGCGTCCTGGCACCATATCAAATACGGATTTTGATGCATCCTTTT
GGGAACCGCAGGAAATTGGTGTAATTCGTCAACGTTCAGAGGAGTTCAGATCAATTCGGG
ATGCCAGAATTGATAGAACTGTTGTCGAAACAAACAGAATCATCATTAGACTTGGAAAGA
TGTTGCAGTTGCCTGAGTCAGTAAGCAGTAAAAGAAAAGAGTATGAAAAAACATTGGTTC
CTTGGGTTGCTGATGAAGATGTTCCTTTCTGTCCAACATGTGGAGCCAAATTCAACATAG
CAAGACGCCGACATCACTGTAGACTTTGTGGTGCTATTATGTGTTCAAAGTGCTCCATAT
TTCTCTCCATCAAAGAAGCAGAGGATATCATTGAGAAAAATAACCAGGCATACAGTGGTA
CGCCTGACCACAGAAAGGTGAACCAGCCTTCTTTACCTCCATTCACGGAAGAAGAAATTG
ATAAGATTCGTGTTCGAGTTTGTGTCGAATGTGACAAGGTGCTTCAGAAAAATCGTGAAA
AACTCAATCTTCAACTAGAATCATCTTTACTTGTACTTCTTCATACGAAAATGATGACAG
CCATGGAAACAGCTATCACACAGACGCCTGAATTTCTTATAATGGCNGAGTCTCTCAATA
AGGGAGAAGAAGATTACCAACTTGATGTTGCTATGGATAAAAGAATAAAGTTGATGCAAG
CTTATGAAGCGGTAGATGTGATTAGCAAAAAAATAGCTGCCCTCTCTGCTGATGATGAAG
AGCATCCACTGTCAAGGGGAGCAGCTCGATTACAAAAGTATGAAAAAACATTGGTTCCTT
GGGTTGCTGATGAAGATGTTCCTTTCTGTCCAACATGTGGAGCCAAATTCAACATAGCAA
GACGCCGACATCACTGTAGACTTTGTGGTGCTATTATGTGTTCAAAGTGCTCCATATTTC
TCTCCATCAAAGAAGCAGAGGATATCATTGAGAAAAATAACCAGGCATACAGTGGTACGC
CTGACCACAGAAAGGTGAACCAGCCTTCTTTACCTCCATTCACGGAAGAAGAAATTGATA
AGATTCGTGTTCGAGTTTGTGTCGAATGTGACAAGGTGCTTCAGAAAAATCGTGAAAAAC
TCAATCTTCAACTAGAATCATCTTTACTTGTACTTCTTCATACGAACAACATGTTAAGTT
TACCTTCACTGCCATCGGCACCAAAGCTGCTTGTTCTTCAATCGAGACGGCGAGCGGAAC
ACGAAAAGAAATTAAGAAGGCAAAGGGAAGAAGCACAGAGGCTGAGAGAAGAGCAAAGAC
GGCAACAAGAAATAGAAAGGCTAAAATTGGAAAGAGACTTGTTCCAGCAGAAGCGAAAGG
ATAGAGGCCAGGAAAGTGTACTTCTCTCAACTCATGATGACAAGCCAGAAGCATCAGAAC
GTGTTGGTGCTGTAGCGGTTGTGAGGGATCCAGGCTGGAGTGCAGACACTATCAGACCAA
AGCCGAAAGATCCGTCAAGCTCACCTGGTCATGGCAATCCGTTTGAAATTTCGGGTGATG
AATCTGATGAAAATGATGATGATACTCTGGAACCTTTGAAAGAGCAGATTTCATATGTTT
CAGAGTCTTTGAAACAGGCACAAGCTGCTGGTATGCANTCCGAAGTACAAAGTTTGGAAA
GGAATTTGAAGGAATTGCAATTTGAATACAAAAAGCAAAAAACAATTCGAGCTTTTCGCA
GTAGCACCTATGAAAAGCTCTCTTACAATGCGTCTTCAAAAGATGACAGTAGCAACTTGG
ACGGGGAGGAAGATGTCATTAGACATCAAATTAATTATATCGCAAAATGCATCAATGAGG
CCAGAGCTGCGGGGAAAACAGACGAAGTGCAAATGCTCGCCGAGAACCTCAATGAAATGA
AACTACTTTATGATAAACTTCACAAATAAGCCTAGTGTTGTTGATTGTTAGCTGGTGATC
TTCGCTGACCTTTTCTCATGCAGTGTTTCTTATAGATTTATATTATGCATATTGGAGTAT
TCACTATCAACCATGACAAATGTAATTAAAATTTCAACCACCG
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[16-37] . |
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[140-253] 1.4E-13 - T[341-452] 1.7E-13 |
| SMART |
Znf_FYVE (IPR000306) - T[149-249] 3.4E-17 - T[348-448] 3.4E-17 |
| Pfam |
Znf_FYVE (IPR000306) - T[153-248] 3.4E-19 - T[352-447] 3.4E-19 |
| SUPERFAMILY |
Znf_FYVE_PHD (IPR011011) - T[153-199] 5.76E-19 - T[232-258] 5.76E-19 - T[352-398] 6.24E-19 - T[431-456] 6.24E-19 |
| ProSiteProfiles |
Znf_FYVE-rel (IPR017455) - T[157-248] 10.918 - T[356-447] 10.918 |
| SUPERFAMILY |
Rbsn_Rab-bd_sf (IPR036531) - T[598-646] 1.26E-9 - T[669-719] 1.06E-8 |
| Pfam |
Rbsn_Rab_binding_dom (IPR021565) - T[604-645] 5.2E-10 - T[680-718] 1.8E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RBNS5_HUMAN | 36.438 % | 238 | 4.03E-68 |