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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S9...' > 
  2. Clone 'AHC0AAA197YK03' > 
  3. Transcript 'Boleac.CG.SB_v3.S50....'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S50.g10823.01.t

Possible name(s)

Boleac.CG.SB_v3.S50.g10823

Gene model

Boleac.CG.SB_v3.S50.g10823

Location

S50 [227,907 / 235,542]

Sequences

Amino acid sequence

Length: 265

>Boleac.CG.SB_v3.S50.g10823.01.p
MAHVAYARYLFLICISICCCEGVQQDKVDHANCVTAYKNCREHKSCRLSYRNIGSKCTVI
EGRCSAIMKHLPACDKIMKDIFTHGFPKTRCVCDKDTAKCQDIQRKIYQNPCFASIRHLK
ERNLFPHDVSATTVAQVHTNSTTTLTAQRTTPKKKEKQPANSLDRSTTTVKETTTTVLTI
DGRKDEYNKDYKMKILDQDKTDYKLLTIIFATLLGLFILLVAAFFAWSGIKNIVYTQGKN
VSKERPGSLQKGDGKLCSNNNVSKD

Nucleotide sequence

Length: 1,925

>Boleac.CG.SB_v3.S50.g10823.01.t
AGGTTTTTGCACACAAAAACATTTTCTAAAATTGCTACTAGCCAACTATGGCCCACGTAG
CCTACGCAAGATACTTGTTTCTTATCTGCATTTCAATCTGTTGCTGTGAAGGAGTACAAC
AGGATAAAGTTGATCATGCGAATTGCGTAACCGCTTACAAAAACTGCAGAGAGCACAAGT
CATGTCGATTATCATACAGAAACATTGGATCTAAATGCACAGTTATCGAAGGTCGTTGCT
CAGCCATAATGAAGCATTTACCAGCGTGTGATAAAATTATGAAAGATATTTTCACACATG
GATTCCCGAAAACTCGTTGCGTCTGTGATAAGGACACCGCGAAGTGCCAGGACATTCAAC
GTAAAATTTACCAGAATCCTTGCTTTGCATCTATCCGACACTTGAAGGAACGAAATCTTT
TTCCGCACGATGTTAGTGCCACCACCGTCGCTCAAGTTCATACGAATTCCACCACAACCC
TAACGGCACAAAGAACGACACCAAAGAAAAAGGAAAAACAGCCTGCGAATTCCCTGGATA
GGAGTACGACTACGGTGAAAGAAACGACTACAACAGTGCTTACAATTGATGGTCGAAAGG
ACGAGTATAACAAGGATTATAAAATGAAAATTTTGGACCAAGACAAAACCGATTACAAAC
TACTCACAATTATCTTCGCGACCCTACTTGGATTGTTTATTCTACTCGTTGCCGCATTCT
TCGCTTGGTCCGGCATCAAGAATATCGTCTACACACAAGGCAAAAACGTTTCCAAGGAAC
GACCTGGATCATTGCAAAAGGGTGACGGAAAGTTATGTTCAAACAATAACGTATCAAAAG
ACTGAGGCATACTTTTCTGGGAAACTGTTAAAGTATGTGGCAACGCAATCCCATCATGAT
GATACGCCACTAAAAAGCACAAGTCTGAAGTTTAGATCTGCAACAGACTAGTCATTCGGT
ACCGATATCAATGACAATGCGCTTGGCTTTCCCTTAAGCGTCAAGTTTCTGTAGTTGATG
CGGAACGGTCACCGCCACAACATGATGTTATTTGGGGAGTTTGCCGAACAATGATAATTA
TCTGGGTACCATTTTGAGAGCTGTAGCAGAATACGTTGGCGAAAATCATCAATACTTTGG
TGGTGAAAGAGTCAACGAAGTGAATTCAAAACAGTGCAGATGAAAAATCGATGATCAACC
GAATATGTCCGCAGAACCGACCGCTTTTCCTCTGGCCACTGTACTTGGACATCGAACAGA
GGGGTAACTGAAATCAACTCAGTCCTAGCAGTATTTTTGAAATTTCAACCTAGTTTTGAT
CCGTGATGATGGTAACCTTGTTAAAAAGAATTCCTCACAATACCGTAGAGCCGAACATGT
TCGCCAAAATTTACGACGAACTCACACAATCAATCAATCAGAATAGTACCACAGCGACTG
ACATATAATGGAAATAGCTAATACCGTGCGTTTTATCTTGGTAGGCCAATGCGACTATTG
GGTTGGCGATAGCGAATGTGGAGTAGTGGGGGCCACCCGNTCAGATGAATAAATCACTGT
AAGCATTTGTGTTACTCACGTATTTTTCCCACGCATTCGTCCCGCTTGCTGGATAGATCT
GTACGAATAGCAACTTTTGAACATCGGTTCCATTAGCGTAGAACGTAGAACGTGGTAGCC
CAGCAGGCTCATCCAAGTAAGGCGTCCAGCTGAATGCCAGTTGGCAACAGTACAAATCAA
CTTTTCAAATGCCTAGACATAGCTTCATCGTACCCTAAAAAATGTAGGCATGTCTCGTTG
ATTTCTCGTTAATTTGCTTTCTGCCTTATCCTGATTCTGTATAATAATCCTGCGATTTTT
GTCTGTGCAATCTAGTTCTCGTGTGCACTACGCGTGTCTTCATATAAATTTCACTGAATC
ACGAA

InterProScan

SUPERFAMILY
GDNF_alpha (IPR037193) - T[31-115] 2.22E-6
SMART
GDNF/GAS1 (IPR016017) - T[33-112] 0.0018
Pfam
GDNF/GAS1 (IPR016017) - T[33-112] 2.5E-5

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value