Aniseed - Transcript Card

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S511.g10989.01.t

Possible name(s)

MPV17; MPV17L2; PLAC8

Gene model

Boleac.CG.SB_v3.S511.g10989

Location

S511 [0 / 2,800]

Sequences

Amino acid sequence

Length: 277

>Boleac.CG.SB_v3.S511.g10989.01.p
MSAWTYGFCDCFNNLSLCIITFLAPCYTLGKTAEKVGDSCCWCGMAYLCCFCIPAGIVRS
KIREQKNIDGMLLTDFMAHLFCPFCALVQDAQEQRTEVTWSGSRMMNAFKRLTHLYTKQV
NKRPLITQALTAGTMTTISDVITQRLVEKKEMIDFRRTAIMGSCGFFYFGPLVGAWLSIL
NKSKLPVFACVALDQGIFAATILSGFLGIQSVLSGKSISAARERIEKDLFSVMKVNWMVW
IPAQTLNFYVVPFQFRMIFMQVVAFFWNCYLSNKANS

Nucleotide sequence

Length: 1,213

>Boleac.CG.SB_v3.S511.g10989.01.t
ATGTCAGCCTGGACTTACGGATTTTGCGATTGCTTCAATAATCTGTCATTATGCATCATT
ACATTCCTTGCACCATGCTACACTCTGGGAAAGACTGCTGAGAAAGTGGGAGACAGCTGC
TGTTGGTGCGGAATGGCCTACCTATGCTGCTTCTGTATTCCTGCTGGAATCGTTCGTAGT
AAAATTCGTGAACAGAAGAATATTGATGGGATGCTCCTCACGGATTTTATGGCTCATTTG
TTTTGTCCATTCTGCGCACTTGTGCAAGACGCTCAAGAACAACGGACCGAGGTCACCTGG
TCAGGCAGCAGAATGATGAATGCGTTCAAAAGGCTGACCCATTTATACACCAAGCAAGTC
AACAAACGACCTCTGATAACCCAAGCTCTTACGGCAGGTACCATGACAACGATATCAGAC
GTCATCACCCAGCGACTTGTCGAAAAAAAGGAGATGATTGATTTTCGAAGAACTGCGATT
ATGGGGTCATGTGGATTCTTTTATTTTGGTCCACTCGTCGGAGCATGGCTATCAATCTTG
AATAAATCCAAGTTGCCAGTTTTTGCTTGTGTCGCGTTGGATCAGGGAATTTTTGCTGCT
ACAATTCTTTCTGGATTTCTTGGAATTCAATCAGTATTAAGTGGGAAGTCAATTTCGGCT
GCACGAGAACGTATCGAAAAAGATTTATTTTCGGTCATGAAAGTCAACTGGATGGTATGG
ATACCAGCCCAGACTTTGAACTTTTATGTGGTTCCATTTCAATTCAGGATGATATTTATG
CAAGTAGTAGCGTTTTTCTGGAACTGTTACCTCAGCAACAAAGCCAACTCATAACAAATT
GTTGATTGAAATACACATGATGAATGACTTGTTGACGACATTTTGCAACTCCAGTGACTG
AGTTTCATATTCTGACATTTCCAGCATTCATATTATTCCACTTCATGAAGAACTGTGGTA
GAGAAAGTTGCGCTGAATCATATGCATTCATTGAGGCTCCTTATAAATTGGTTGATGCAA
GAAATAACGATGTGCTTATTTTTTGATTTCATATTTTATCTCAATCATTCCATACGCTTC
ATATATTGTTTCATTGATGTATGCCTGTGTATAAGCTGTGCTCATCTTAGTGTGGGGCTG
CATTGAAGATGTTGAGCAAACGACAAGCTGTTTGTTGTATAATCAGATCACGCCAGTAGC
GTGGCATCGCATC

InterProScan

TIGRFAM	PLAC_motif_containing (IPR006461) - T[3-93] 8.5E-21
Pfam	PLAC_motif_containing (IPR006461) - T[4-93] 3.8E-18
PANTHER	Mpv17_PMP22 (IPR007248) - T[112-275] 8.4E-45
Pfam	Mpv17_PMP22 (IPR007248) - T[212-272] 5.1E-24

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
MPV17_HUMAN	33.929 %	106	2.65E-28
PXMP2_HUMAN	29.193 %	74.3	5.08E-16