- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.C7.52.v5.A...' >
- Transcript 'Haaura.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.L170.28.v3...' >
- Transcript 'Boleac.CG.SB_v3.S523...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S523.g11163.01.t
Possible name(s)
TNXB
Gene model
Location
S523 [72,662 / 82,241]
Amino acid sequence
Length: 437
>Boleac.CG.SB_v3.S523.g11163.01.p
MEVGSIESGKGSDRWMKIFIFLLSLIVFVKATNQAGTTAFKSLVCQHCDDWCGSDDVIIR
EPRVGKFGPRIIRGPAGPPGPKGRQGDEEIRGPEGPRGKIVPPGVMNMTMIEETIDRRIK
QGKEDINLSQLRQSSLPWIFNSNPEPIVVVLYNSISHVWKVFQRRMRGDVDFYRGWDDYV
DGFGDLRGDFWMRLETIHQLTKDGGMELRIDMIQNDETHLFAKYSVSTLAPEELQKARDL
TPKRQSGVLYIDQPVLGITEIYCDLETDGGGWTGEISRVCCDDIFRGYKVVEQKQVWVFQ
RRVGGSVNFYRGWYSFVNGFGNKEGSFWLAKYNNFRIGRATDNNRLTISGYSRNAIDSLE
IHDRMEFTTNDNNNDVHSSVNCAVHIKGAWWYRNCYMSKLNGIYGDTNWNGINWRERGIA
IAARIMSFTEMKFRRKS
Nucleotide sequence
Length: 1,674
>Boleac.CG.SB_v3.S523.g11163.01.t
ATGGAGGTTGGATCAATTGAATCAGGAAAAGGATCAGATAGGTGGATGAAGATATTCATA
TTTCTGTTATCGTTAATTGTCTTTGTCAAGGCAACGAATCAAGCTGGAACAACAGCTTTC
AAAAGCCTCGTCTGTCAGCACTGTGACGACTGGTGTGGGAGTGATGACGTCATTATCCGT
GAACCCAGGGTGGGGAAATTTGGACCGAGAATAATCAGGGGCCCAGCAGGCCCACCCGGT
CCCAAAGGGAGACAAGGTGATGAAGAAATAAGGGGTCCAGAGGGCCCAAGGGGCAAAATT
GTTCCACCAGGCGTGATGAATATGACGATGATCGAAGAAACAATTGACAGGAGAATCAAG
CAAGGTAAGGAAGACATTAATTTGTCACAGTTACGTCAGTCATCGTTGCCATGGATATTC
AATTCAAATCCAGAACCGATCGTAGTCGTATTATATAACAGCATATCACACGTTTGGAAG
GTCTTTCAGCGCAGGATGAGGGGCGATGTTGATTTCTACCGAGGCTGGGACGATTACGTA
GACGGTTTCGGAGATCTGAGAGGCGATTTTTGGATGAGACTGGAAACAATTCATCAGCTT
ACAAAAGATGGCGGGATGGAATTGAGAATCGATATGATCCAAAACGATGAGACTCACTTG
TTTGCTAAGTACAGTGTTTCCACCTTGGCTCCCGAAGAGCTGCAAAAAGCGAGGGATCTC
ACTCCGAAAAGGCAGAGCGGCGTATTATATATCGATCAACCGGTGTTAGGCATCACTGAG
ATTTATTGTGACTTGGAGACAGACGGGGGTGGATGGACTGGAGAAATCTCCCGCGTTTGC
TGTGATGATATTTTTCGTGGCTACAAGGTTGTAGAGCAAAAGCAAGTCTGGGTTTTTCAA
AGACGAGTTGGCGGATCGGTTAATTTTTATCGAGGATGGTACAGCTTCGTAAATGGATTC
GGAAACAAAGAAGGAAGCTTTTGGCTTGCTAAGTACAACAATTTTCGAATCGGTCGTGCT
ACAGACAACAACAGATTGACCATCAGTGGATACTCACGAAACGCAATTGACAGCCTCGAA
ATTCACGACAGGATGGAATTTACCACAAACGACAACAACAATGACGTTCACTCAAGCGTC
AATTGCGCTGTCCATATCAAAGGCGCGTGGTGGTACAGAAATTGTTACATGAGTAAACTC
AATGGTATTTACGGAGATACGAACTGGAATGGCATCAATTGGCGAGAACGAGGTATCGCA
ATTGCAGCAAGAATCATGAGCTTCACTGAGATGAAATTCAGAAGAAAATCTTGAGTTTGA
TAGCCGGTATTTTGACCATAGAGTTGGAATTTCTTGATAGCCCTTCATGAATTTCTCTCT
TCATGTTATATCGTCTATGTATATTATGAGCAGAGTTCCATTTCTAGACGGGAATAGCCC
TGGCTTTGCTGTAGTGCGTCCGTTTTTGGGGAAAATTGGAGTACCGGCATCACCATTATT
TATTGGCGAAAATATGTTACTCTCGTCGCAAACCGATCCTTTTGGGACTCGAATTCGACG
TCCAAATTCGGGAGTGTCCCGCTTTTCGTTTTACATAATCGGGTTATCTTCGAACCGATC
TTCCATTTTCTGAGAACTGCGACTCGCCTAATTCCTTATGATGCGGTGCTAATT
| ProSiteProfiles |
Fibrinogen_a/b/g_C_dom (IPR002181) - T[114-437] 21.06 |
| Gene3D |
Fibrinogen_a/b/g_C_1 (IPR014716) - T[119-236] 1.0E-25 - T[237-329] 2.5E-13 - T[330-355] 3.5E-24 - T[428-434] 3.5E-24 |
| SUPERFAMILY |
Fibrinogen-like_C (IPR036056) - T[125-226] 4.06E-26 - T[241-433] 6.02E-42 |
| Pfam |
Fibrinogen_a/b/g_C_dom (IPR002181) - T[156-231] 3.8E-19 - T[330-434] 8.7E-18 |
| SMART |
Fibrinogen_a/b/g_C_dom (IPR002181) - T[229-436] 1.9E-24 |
| Gene3D |
Fibrinogen_a/b/g_C_2 (IPR014715) - T[356-427] 3.5E-24 |
| ProSitePatterns |
Fibrinogen_CS (IPR020837) - T[390-402] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FCN2_HUMAN | 33.493 % | 110 | 2.04E-27 |
| TENX_HUMAN | 31.884 % | 116 | 9.88E-28 |
| FBCD1_HUMAN | 35.047 % | 111 | 7.48E-27 |