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- Transcript 'Boleac.CG.SB_v3.S52....'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S52.g11097.01.t
Possible name(s)
CCT3; CCT4; CCT5
Gene model
Location
S52 [184,689 / 188,616]
Amino acid sequence
Length: 508
>Boleac.CG.SB_v3.S52.g11097.01.p
MAAPLLVLNPNTKRESGKKVQLGNVNAAKTIADVIRTCLGPRSMMKVQHPAAKSMIEISR
TQDEEVGDGTTSVIILAGEMMSAAEQFLEQKMHPTVIISAYRQALEDMQEALKEISVVVD
VNDPKEMKKIIASAIGTKFISKWMDLATEIAIKAVATVAIEDETSGQREIDIKRYAKVEK
VPGGVIEESRVLQGVMLNKDITHPRMKRRIENPRILLLDCPLEYTKGESQTDIELSKEND
FNRILQLEEEFIRRVTFEIIAFKPDLVFTEKGISDLAQHFLVKAGITAIRRVRKSDNNRI
ARACGATVCSRTDEIREEDIGTEAGLFEIRKFGDEYFTFITECKNPKACTILLRGASKDI
LMEVERNLQDAMQVARNVMVDSRLVPGGGAVEMAVAHKLAEKSKTMTGVEQWPYRAAAQA
LEVLPRTLIQNCGASTIRTITALRAKHTDADNETWGVNGETGEIADMKDLEIWEPLSVKM
QTYKTAMETSMXLLRIDDIVSGVKKLDG
Nucleotide sequence
Length: 1,727
>Boleac.CG.SB_v3.S52.g11097.01.t
AGCATCTAGAAAGGGAAGCACGTTGTTGCCATATCTGCTGTTGCAAGTCGCACCCTTTTT
GTGAAGAAAATACTTCCTCTTGTTTACTTGATTTACAAAAGATGGCTGCTCCGCTGCTAG
TGCTGAACCCTAATACAAAGAGAGAATCCGGTAAAAAAGTGCAGCTTGGAAACGTTAACG
CCGCTAAAACCATCGCGGATGTAATCAGAACATGTCTTGGTCCAAGGTCTATGATGAAGG
TTCAACATCCGGCAGCCAAGTCAATGATCGAAATCAGCCGAACTCAAGATGAAGAAGTTG
GCGATGGGACTACTTCTGTAATAATTCTTGCTGGAGAGATGATGTCCGCAGCTGAACAGT
TCTTGGAACAAAAGATGCATCCAACTGTGATCATATCAGCGTATCGCCAAGCCCTTGAAG
ATATGCAAGAAGCACTGAAAGAGATTAGCGTTGTTGTCGATGTCAACGACCCGAAAGAGA
TGAAAAAGATCATAGCAAGTGCGATAGGAACAAAATTTATCAGTAAATGGATGGATTTAG
CCACTGAAATAGCAATCAAAGCTGTGGCTACAGTAGCCATTGAGGATGAAACTTCCGGAC
AGCGGGAAATTGACATTAAGCGATACGCTAAAGTGGAAAAGGTGCCAGGTGGAGTTATCG
AAGAGTCCAGAGTTCTTCAAGGAGTTATGCTCAATAAAGATATCACGCATCCACGGATGA
AGAGACGCATTGAGAATCCTAGAATTTTGCTGTTGGACTGTCCTCTGGAGTACACAAAAG
GCGAGAGTCAGACTGACATTGAACTGTCAAAAGAGAATGACTTCAACCGCATTCTTCAAT
TAGAAGAGGAGTTCATCCGACGAGTTACTTTTGAAATTATTGCATTCAAACCTGATCTGG
TATTCACAGAAAAAGGAATTTCAGATTTAGCACAACATTTTCTGGTGAAAGCGGGTATTA
CAGCAATACGACGGGTACGGAAATCAGACAATAATCGTATTGCTAGGGCATGTGGTGCCA
CCGTGTGTTCAAGAACAGATGAGATTCGAGAAGAAGACATCGGGACTGAAGCTGGCCTTT
TTGAAATTCGTAAATTTGGTGATGAGTATTTCACTTTCATCACTGAATGTAAAAATCCGA
AGGCTTGTACTATTCTTCTTCGTGGAGCCAGCAAAGACATTCTCATGGAAGTTGAGAGAA
ATTTGCAAGATGCAATGCAAGTAGCGAGAAACGTCATGGTTGATTCGAGACTTGTGCCAG
GCGGAGGCGCAGTAGAAATGGCCGTTGCTCATAAATTAGCAGAAAAGTCCAAGACAATGA
CTGGAGTGGAACAATGGCCATACCGAGCTGCAGCCCAGGCTCTTGAAGTGTTGCCAAGAA
CTTTAATTCAAAACTGTGGAGCAAGCACTATTAGAACAATTACTGCACTGCGTGCAAAAC
ACACCGATGCAGACAATGAAACCTGGGGTGTCAATGGCGAGACAGGTGAAATTGCTGACA
TGAAGGACTTGGAAATCTGGGAGCCGTTGTCTGTTAAAATGCAAACTTATAAAACAGCTA
TGGAGACGTCTATGTTNCTTCTACGAATTGATGATATCGTTTCTGGTGTCAAGAAGCTTG
ATGGATAAAACTCCTCGCCGCAGTCAAAGCAGCAGTGTTTCTACTTCGCATTTCACACCT
GTTTGTCGTCAAGTTTTGTCGTTTCGGTAGAAAAAATTTGTACGTGG
| CDD |
Chap_CCT_gamma (IPR012719) - T[4-502] 0.0 |
| PANTHER |
Cpn60/TCP-1 (IPR002423) - T[8-47] 2.5E-260 - T[46-506] 2.5E-260 |
| SUPERFAMILY |
GROEL-like_equatorial_sf (IPR027413) - T[13-119] 1.05E-71 - T[382-502] 1.05E-71 |
| PRINTS |
Chaperone_TCP-1 (IPR017998) - T[33-49] 1.1E-10 - T[350-372] 1.1E-10 - T[384-396] 1.1E-10 |
| Gene3D |
GROEL-like_equatorial_sf (IPR027413) - T[45-118] 5.4E-160 - T[382-499] 5.4E-160 |
| Pfam |
Cpn60/TCP-1 (IPR002423) - T[45-501] 1.1E-144 |
| TIGRFAM |
Chap_CCT_gamma (IPR012719) - T[46-505] 1.6E-238 |
| ProSitePatterns |
Chaperonin_TCP-1_CS (IPR002194) - T[62-70] . |
| SUPERFAMILY |
TCP-1-like_intermed_sf (IPR027410) - T[119-192] 1.22E-24 - T[346-381] 1.22E-24 |
| Gene3D |
TCP-1-like_intermed_sf (IPR027410) - T[119-192] 5.4E-160 - T[346-381] 5.4E-160 |
| SUPERFAMILY |
GroEL-like_apical_dom_sf (IPR027409) - T[188-355] 7.59E-54 |
| Gene3D |
GroEL-like_apical_dom_sf (IPR027409) - T[193-345] 5.4E-160 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TCPG_HUMAN | 70.286 % | 763 | 0 |
| TCPD_HUMAN | 30.754 % | 257 | 2.95E-79 |
| TCPE_HUMAN | 32.762 % | 276 | 1.38E-86 |