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  1. Transcript 'Boleac.CG.SB_v3.S52....'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S52.g11116.01.t

Possible name(s)

KHDRBS1; KHDRBS2; KHDRBS3

Location

S52 [336,900 / 344,400]

Sequences

Amino acid sequence

Length: 344

>Boleac.CG.SB_v3.S52.g11116.01.p
MEQNDSKYLPELMAEKDSIDPSFEHAVRLITQEIDNIKNPKKERPKPDLKKVILDVSGKP
QRVECNVLVPADKFPSVNFVGRLIGPGGSTMKGLQELTNTKMAVLGRGSVRESERKKAEE
LKDIDEKFFHLNFPLHVHISAVGPVPQAFVNLGRAVAEIQKLLVVDEATEAQYGMQAALA
HQQATRGGRGRGGGRGGGRGHSSRGFGRGGRGGSGRGMGGGRGQGRGGGGRGRGRGGQNQ
QFNQMQQAQAENYSEDFGYDAYGMGGGSSFDQSYEGYGEDYSGGFDASYGDGSYAEDFSY
GQDSYDSYGNGGGVQNTGNFGGGKQQFRGKMGRGGGGRGRQKPY

Nucleotide sequence

Length: 3,491

>Boleac.CG.SB_v3.S52.g11116.01.t
CTCGTGTCGAGTCCAGTTGTCGTGTCGTCGAGTCCTGCAGGGTCACGTTGGATGCCAGTT
CGTTGAGCTCTACTTGTACTCGATTTTCAACATCCACTTCTTCGTTTTACGGGGACTCGC
TATTAGTATCACCTTGGTTTGGTGTAATTATCAATCATCATGGAGCAGAATGACAGCAAG
TATCTTCCAGAGTTGATGGCTGAAAAGGACAGCATTGATCCTTCGTTTGAACATGCGGTG
CGCCTGATTACACAAGAAATTGACAATATCAAAAATCCGAAGAAAGAAAGGCCAAAGCCA
GACCTAAAGAAAGTTATATTAGATGTATCAGGGAAGCCCCAAAGGGTTGAATGCAATGTT
TTGGTGCCAGCAGACAAATTTCCATCGGTGAATTTTGTTGGTCGACTCATTGGTCCCGGT
GGTTCAACAATGAAGGGTCTACAAGAACTCACAAATACCAAAATGGCAGTTCTTGGCAGG
GGATCTGTCCGGGAAAGTGAACGCAAAAAGGCGGAAGAGTTGAAGGATATTGATGAGAAA
TTTTTCCACTTGAACTTTCCCCTTCATGTTCACATCTCTGCAGTTGGTCCAGTTCCACAG
GCGTTTGTCAATCTGGGAAGAGCAGTTGCTGAGATTCAGAAGCTCTTGGTAGTTGATGAG
GCTACAGAAGCCCAATATGGTATGCAAGCTGCGTTGGCCCATCAACAGGCCACGCGTGGT
GGACGAGGTCGTGGAGGTGGGCGCGGCGGTGGAAGAGGCCACAGTTCAAGAGGGTTCGGA
AGAGGAGGTAGAGGGGGATCCGGTCGTGGAATGGGAGGGGGTAGAGGTCAAGGAAGAGGT
GGTGGTGGGAGAGGACGGGGACGAGGTGGACAGAATCAACAGTTTAATCAGATGCAGCAA
GCACAAGCTGAAAACTATTCTGAGGACTTCGGTTATGATGCTTATGGAATGGGAGGAGGT
TCATCATTTGATCAGAGTTATGAAGGTTATGGTGAGGACTACAGTGGTGGTTTTGATGCG
TCATATGGGGATGGGTCATATGCGGAAGATTTCAGCTATGGGCAAGATTCTTACGATTCT
TATGGCAATGGAGGTGGTGTACAGAATACTGGAAATTTTGGAGGTGGGAAGCAGCAATTC
CGAGGGAAGATGGGCAGAGGCGGAGGTGGCCGTGGAAGACAGAAGCCATACTAACTCGGA
TGTCTCCGGTTAGTAGTGTTGTTGAAACAACCTTCTTGAACTGAACCGCCAAAACTGACA
TCACTGCGTTCATAAAACAGTATTTGCAAGTTCTGAACTCTGACACAAAACATCTTGTTT
TATTCGTGCAGAAAAGCAGTGACTCAAGTTAAAATTTCCAAACTTTGAATCATTTTTATA
CATGTAAATGTCAATTAACAATATAAATAAACAAAAAAATACCACAAATGCAGGGATAAG
TGTCCTATGACTTGATTTCAACCTCAACTGTTAGTGCTGTATGTTCCAACGCCATTGCGG
TCAAATCCTCACCGATGCAGAGTTGCATAACTGTCCTGTCTAAACTTTTGGGAATTGATG
AATAACAAAAATGGGGTGTGAAATGTGACGTTGCCGTCTGGAAATGATCAATGCGATGTT
GGGGAGGGTTGATTTGCATTTGGAAGTATTTGCACAGCGATGAAGAATAAGAACAAGTAT
GTTCGTAAAAGATTGTTGAAGCGATGGGGATGGTAACTTATTTCATTCCGTTTGTTTACA
ACGTAATTTCCAAATGTGTTACAGTTGCAGGACATCAAAAACTAATTGCTGCCAGATTTA
TACTGGTCCTTATTCAACATTTCCAGAGGATTGTAAACAATCAAATGAAAGTGGCCTCTG
TGTATCTCAGATATGCAGGTCCTAAACCATGTAAAAAAATTGAGAAACGCTAAAAGGCTT
TTGCCTACCGCTCTGAGAGCAGAGTTGAAAAAAACTACTTAAATTTGTGATCTGTGAAGC
GCAATTGAAAGATCATCGATGAAATCTAAATATTTAATGTCAAAAAGCTGGAAAGCCGAG
TGATGGGACAATGCAATAACAACGCAAAATGAGGTAAAGTAGAACGGTTCATATTGAGAT
GATATTACAAACCTGATGCATTTATAGCTGTAATGACATAGGCACTAATCAACCTTACTT
CTTAGGCTCTTGTTGTGCCTGTGACAAATGTATAACAAACCAATCTCAGTAATATGACCT
GATTCTGATATGTGCATTGACTATTTCAATAAAAGTGCACCCCAGTCTGGTAACGCCAAC
TGTATAATTAAGGGTAGGCATCAACTTAAAAATGAATAAAAGTTGGGGCAGTGGCACCCC
TTGAAACTTCGTGCGGTCTGATTTGCCTCATAAACAGCTCGGATGCTAAAAGCCAATAAA
TATCTGACTTATAACCAAATAGGAATGAACCAATATCTAGGACTTCAGCAACGTTGTGAA
ATACTCTAAAGATTGTTATCTGCGCTATTGGTGTTGCCTTAACTCNTCGAGCAATAGATA
GATAATAACAAGTCATCCCTCGATGTTGCTTTGCTTTCTGGTTATTTATTGTATATATAC
TTTGTTTAGCTGCAGTGTTAACTTGAAATTTTGCTGGATTCCAGACTGCCCTGAGGATAA
CCTTCACGTTGCTGTTTGGATCTTTGGAGGCTATGTTGGTATGTCGAGCTGAAGGACTTG
ACGCATGAGCGTCATAGCAAATTGAACAAGGCTGAGTTACAGTAGTTCTGGCGAAGCATG
CAATGTGGTATGTGCTGAAGCTTTTGTTATCGAGTATGTCATTTCTTGGGCTATTGCCTA
TATTGCTATGCATATTGCGTTATGAGACTTATATCACACACTTATTTATTCTCCAGTTGA
AATAATACTTTCTATACTAGGTGATACTTCAAAACAGTCACCATTTATTCGGTAACGTGC
CCAACTGCCAGTATGCTGCTCTATGTTAGGATGGCTGGTCATGATACAATGGATGCAGAT
TTGTCTTCGGATTATCAAGGATGTGGCTGTTCACTGCTCAATTTCCAGTTTCAGGGTTGC
AGTACACAGTGCACAACTGCACTTGTATGTCTTGGGATCATCTAGGATGTGACTTATTTA
CTGCTCGATTTCCAGGGCTGCATACTGCACTTGGAAAGGAGTCGTTTCCTTCAAGCAGTG
GTGCTGTTGATAAAAGTTGGATCGTGACTCTAAAAGAAGAAAGGTGTAGGAGCCGCGCTC
CAATGAGAGAGATTTCGACTCGAACTGTGCCATGCTGCATTATGAAAGGCATTGTTATAA
CTGTCAGGCTGGCAAGGCTGTGCATGTGTGCAATGTGCGCATGGTGGTCTAGTCATTGAA
GCTGTGGCTGCAGATGCTGGAGAAATGCTTTGGGTGCCGTTTTACTGGTTGGCAAGGCTA
CACAAATTGTGGTCTAGTCTGGGCAGCTGTGACTGCAGATGCTGGAGAAATGTTATTGGT
GGCCATATTAC

InterProScan

Gene3D
KH_dom_type_1_sf (IPR036612) - T[2-183] 9.3E-40
Pfam
Qua1_dom (IPR032571) - T[7-56] 8.8E-15
SMART
KH_dom (IPR004087) - T[61-126] 3.2E-6
SUPERFAMILY
KH_dom_type_1_sf (IPR036612) - T[66-193] 8.41E-18
Pfam
KH_dom_type_1 (IPR004088) - T[67-109] 1.7E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
KHDR3_HUMAN 34.783 % 159 3.87E-46
KHDR1_HUMAN 35.501 % 160 2.34E-45
KHDR2_HUMAN 33.333 % 140 1.51E-38





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