Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Haaura.CG.MTP2014.S1...' > 
  2. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  3. Transcript 'Cisavi.CG.ENS81.R22....' > 
  4. Transcript 'Boleac.CG.SB_v3.S52....'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S52.g11118.01.t

Possible name(s)

ID2; TWIST1; TWIST2

Gene model

Boleac.CG.SB_v3.S52.g11118

Location

S52 [380,749 / 381,852]

Sequences

Amino acid sequence

Length: 108

>Boleac.CG.SB_v3.S52.g11118.01.p
MGKSIPTKPSSTAVYGGCLTKPSPKSIKIRRHEDDSNLTDLFTNLKSVVPALAGKSTEEL
TSLEIMQHAIDYIDELTVIVGAARRDNCSISSSKVATEHTQVATTVYR

Nucleotide sequence

Length: 706

>Boleac.CG.SB_v3.S52.g11118.01.t
ATGGGCAAATCTATTCCTACCAAGCCAAGCTCAACAGCGGTTTATGGTGGATGTCTTACG
AAACCATCACCAAAGTCAATCAAGATTAGAAGACACGAAGACGACTCAAATTTGACAGAT
TTGTTCACAAACTTGAAATCTGTCGTTCCGGCGTTGGCTGGAAAATCAACTGAAGAATTA
ACCTCATTGGAAATCATGCAACACGCTATTGATTACATCGATGAATTGACAGTAATCGTA
GGAGCAGCGCGTCGAGACAACTGTAGTATCTCAAGCAGCAAAGTAGCGACAGAACATACC
CAAGTTGCGACGACTGTCTATCGATGACCGAAGTCTGTGAATGAACGCGCCGCATCAAGC
GACACAAACGCCAGGCAAAAAATAGTTCGGATCTACGAGCAACATCTTCTATTCGTACGA
GACGATTGAAAAAACTCATCAAATATATAAGATATATTTCACGATCCAACTCATTCGATG
CGAAGAGCTTCTACACTAGCAGTCACCTTTTCAAAGCGACCTATTTGCTCGTTTTATTAC
GTTTTACTGTTACATTTTTACACCCAACTCTGAACTAATATACCATTCCATGTTGGACAT
GAACGTGGTTGTATTCTGACTGTACAAATACAAGATGAGGTGTTAGCTGAGTGGATTTGA
CACCAGTACAAATTGACCGCCTATTCCTAAAATGCCAGAACTCTCG

InterProScan

Gene3D
HLH_DNA-bd_sf (IPR036638) - T[20-79] 2.8E-8
ProSiteProfiles
bHLH_dom (IPR011598) - T[22-76] 8.848
CDD
bHLH_dom (IPR011598) - T[28-76] 7.91093E-5
Pfam
bHLH_dom (IPR011598) - T[37-76] 3.1E-5
SUPERFAMILY
HLH_DNA-bd_sf (IPR036638) - T[37-87] 2.49E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value