- Clone 'cima87255' >
- Transcript 'Moocci.CG.ELv1_2.S34...' >
- Transcript 'KH2012:KH.C10.529.v1...' >
- Region 'REG00000670' >
- Transcript 'Boleac.CG.SB_v3.S539...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S539.g11363.01.t
Possible name(s)
SEC24A; SEC24B; SEC24C
Gene model
Location
S539 [73,032 / 85,662]
Amino acid sequence
Length: 968
>Boleac.CG.SB_v3.S539.g11363.01.p
MAHNGLQGNYGMNYVSPGTPQHHVQQPARHQSPVQQIGHSVGPSSTPRYPVSQFPQNQVF
DSRQAAAHGSLPPTNCATVPKPYSAHGLVSNNGPFTTKLTAPHLPHSAHHDYRSDAVPPV
SDIPPPPLHHPVENHRHSPLVSPQLVPHPYNLSPVRAPQVPITYNATVPTVPPPQAGHFH
ARMPGTRPSYNPGAPPPLSNYPAQAPNPQEMRPTPAWAQHPPVPVPAAAPRFDSWPALGG
SPGPLNSKNRPVDITQEKFHVLEKKPVLEPLSFRESMTNQFLVPPNQKNCSPEVFRCTLN
AIPNSQSLLNKVKLPLGLIIHPFKDLDSLPVISAGTIVRCKRCRTYINPFVEFLDERRWR
CNLCFVVNDVTEEFLHHPITKSFGEPHTRPECTNSTIEFIAPQEYMVRPPQPAVYMFLFD
VSHAALETGYLDIVCKRLLKKLDYLPGDKRTKIGFITYDGNIHFYKLVDGSSQPAMLVVS
DIDETKCCLGSALQAALKLMSAYGGRITVFQQSLPNAGAGALNSREDPXARASSVTTASI
NPSTGFYKKMALELSGKQIAADFFFLNAQYIDIATLSCTSRFSAGDIHYYPNLHVIHNPL
QVQRLIYDFDRYLTRKIGLEAVMRVRCTKGIAINNFHGNFFVRSTDLLALANINPDAGYG
INLSIDDDISSLPFISIQAALLYTSSKGERRIRVHTMKFPTVKSAIDVFNAVDSDAVVTL
LSKMAVDRSMSSSLSDAKDALLNAVIDALKSYRDCSGCGTSTSAIFVPPCMKSYPLAIXC
LLKHPAFRSGVSTRLDDRVFSMIEFKSQPVGYILQTIHPNLYRVDNLSEQGSADFGGNIV
PQPQQLPLSAESILRNGVYLMDTGWNLYLYVSAYSSREFISDVLGVKQFSNIEPPMYCLP
ELDNPASEMFNSFLDWLREQRPYYAAFQVIRSDSREHHMFMHYLRLDKSESALSFQEFLL
HVQKELAK
Nucleotide sequence
Length: 3,133
>Boleac.CG.SB_v3.S539.g11363.01.t
TTACTNTTTGCTCCTAATTGATAGCCAGAGGAATTTGATCGTCTCTATATTTATTGGTAT
TTACACTGGTGTAGACTAATTATCCTGGCTCAAACTGTAGGTTCCAATTAGATGTATTGA
AGAAATGGCACACAACGGGCTCCAAGGAAATTATGGCATGAACTATGTCTCTCCTGGAAC
GCCACAGCACCATGTACAACAGCCTGCAAGACATCAGTCACCTGTACAACAAATTGGGCA
TTCAGTTGGACCATCGTCTACACCAAGATATCCTGTGTCTCAGTTTCCTCAGAACCAAGT
TTTTGATTCAAGACAAGCTGCGGCTCATGGGTCATTACCTCCAACTAATTGTGCTACTGT
ACCAAAACCGTATTCAGCCCATGGTCTTGTTTCGAACAATGGGCCGTTCACAACAAAGTT
GACTGCTCCCCACTTACCACATTCAGCACATCATGACTATCGGTCAGATGCTGTTCCTCC
CGTTTCTGATATCCCACCCCCACCTTTACATCATCCAGTAGAAAATCACAGACATTCTCC
TCTAGTGTCTCCTCAATTAGTGCCACATCCATATAATTTGTCCCCGGTAAGGGCGCCACA
AGTTCCTATTACATACAATGCCACCGTGCCAACGGTTCCTCCACCTCAAGCTGGTCATTT
TCACGCTCGTATGCCAGGAACAAGACCCAGCTATAATCCTGGTGCTCCTCCTCCATTGTC
TAATTATCCAGCTCAAGCTCCTAATCCTCAAGAAATGAGACCCACACCAGCATGGGCTCA
GCATCCTCCAGTACCGGTACCTGCTGCGGCGCCTAGATTTGACTCCTGGCCGGCACTTGG
AGGAAGTCCAGGACCTCTTAACTCCAAGAACAGACCAGTTGATATCACTCAGGAGAAGTT
TCATGTCCTGGAAAAGAAACCTGTTCTCGAGCCGCTGTCTTTTCGTGAATCAATGACCAA
CCAATTCTTGGTACCTCCGAATCAAAAGAACTGTTCCCCAGAGGTTTTTCGATGCACACT
TAACGCTATCCCCAACTCGCAATCACTTTTAAACAAAGTCAAACTTCCTCTTGGCTTGAT
TATCCATCCATTCAAGGATTTGGACTCTTTGCCAGTAATTTCTGCAGGTACCATAGTGCG
GTGCAAAAGATGTCGCACCTATATCAATCCATTTGTTGAATTCCTGGACGAAAGAAGGTG
GCGCTGTAATCTTTGTTTTGTTGTGAATGATGTTACGGAAGAATTTTTGCATCATCCGAT
TACAAAATCTTTCGGTGAACCACATACGCGACCAGAATGTACCAATTCAACCATAGAATT
TATTGCTCCGCAAGAATACATGGTGCGTCCACCACAGCCTGCAGTCTACATGTTTCTCTT
TGATGTTTCACATGCTGCTCTGGAAACTGGGTACTTGGACATAGTCTGCAAAAGGCTGCT
GAAGAAGCTGGATTATCTACCTGGTGATAAACGGACAAAGATAGGTTTCATAACATATGA
TGGAAACATTCACTTCTATAAGTTGGTTGACGGCTCTTCTCAACCTGCTATGCTTGTGGT
GTCAGATATTGATGAAACAAAATGCTGCTTGGGTTCTGCTTTGCAGGCTGCGCTCAAACT
CATGTCTGCATATGGAGGACGTATCACAGTATTCCAGCAATCATTGCCTAATGCAGGGGC
CGGTGCTTTGAATTCAAGGGAAGATCCAAANGCNAGAGCCAGTTCTGTNACCACAGCATC
TATCAACCCATCAACTGGCTTCTACAAGAAGATGGCTTTGGAGTTATCTGGAAAACAAAT
TGCTGCTGATTTCTTCTTTCTAAATGCTCAATACATTGATATAGCTACACTATCATGTAC
ATCCAGGTTCTCAGCTGGTGACATACACTATTACCCTAACCTGCATGTAATTCACAACCC
GTTGCAAGTACAACGTCTTATATATGATTTTGACCGGTATTTGACACGTAAGATCGGGCT
AGAAGCTGTTATGAGAGTGAGGTGCACGAAAGGAATAGCAATCAATAATTTTCATGGCAA
TTTTTTTGTTCGCTCCACCGATTTACTGGCTCTCGCAAACATTAACCCCGATGCCGGATA
TGGGATAAATCTCAGTATTGATGACGATATATCAAGCCTACCATTCATATCAATTCAAGC
AGCTTTGCTCTACACTTCAAGTAAAGGAGAACGAAGGATTCGTGTTCACACGATGAAGTT
TCCTACGGTGAAATCTGCTATTGATGTTTTCAATGCCGTGGATTCTGACGCTGTTGTTAC
TCTTCTTTCAAAAATGGCTGTCGACCGGAGTATGTCTTCTTCACTATCAGATGCCAAAGA
TGCATTGCTGAATGCTGTCATTGATGCATTGAAATCATACCGGGACTGTTCTGGCTGTGG
AACAAGTACAAGTGCAATATTCGTACCGCCGTGCATGAAATCTTATCCGCTTGCAATCAG
NTGCTTGTTGAAGCATCCTGCCTTCCGAAGCGGAGTATCCACCCGACTAGACGATAGGGT
GTTTTCTATGATTGAATTCAAATCACAGCCAGTGGGATACATATTGCAGACCATCCACCC
TAACTTATACCGTGTCGACAACTTATCTGAACAGGGTTCTGCTGATTTTGGAGGAAATAT
AGTACCACAACCACAGCAACTTCCCCTATCAGCTGAATCAATATTACGAAATGGTGTATA
TTTGATGGACACTGGTTGGAACCTGTATTTATATGTGTCTGCATATTCGAGCAGAGAGTT
CATCAGTGATGTTCTTGGAGTAAAGCAATTCAGCAACATTGAACCACCCATGTATTGTCT
ACCTGAGCTGGATAATCCTGCGTCTGAAATGTTCAACAGTTTTCTGGATTGGTTACGAGA
GCAGAGACCATATTATGCTGCTTTTCAAGTAATAAGGTCAGACTCCCGTGAACACCACAT
GTTCATGCACTACTTGAGACTGGACAAAAGCGAGTCTGCTTTATCTTTCCAGGAATTTCT
ACTTCACGTGCAAAAGGAACTTGCAAAATAACGGCTAATCCGCCTTTTATTGACAGAAAT
AATCAGATGCATAGTGTTTTATGTCTGGGTAGTGTCTCGATTTTATCATTAAACTGCTGT
GTAATAATACTAA
| SUPERFAMILY |
Znf_Sec23_Sec24_sf (IPR036174) - T[326-409] 9.16E-23 |
| Pfam |
Znf_Sec23_Sec24 (IPR006895) - T[337-373] 5.5E-14 |
| SUPERFAMILY |
vWFA_dom_sf (IPR036465) - T[410-616] 8.89E-47 |
| Gene3D |
vWFA_dom_sf (IPR036465) - T[412-484] 2.9E-25 - T[485-615] 8.3E-40 |
| Pfam |
Sec23/24_trunk_dom (IPR006896) - T[484-612] 3.9E-27 |
| Pfam |
Sec23_24_beta_S (IPR012990) - T[618-701] 1.6E-19 |
| Pfam |
Sec23/24_helical_dom (IPR006900) - T[713-814] 3.4E-22 |
| SUPERFAMILY |
Sec23/24_helical_dom_sf (IPR036175) - T[713-818] 1.33E-24 |
| SUPERFAMILY |
Gelsolin-like_dom_sf (IPR036180) - T[819-965] 9.15E-25 |
| Gene3D |
ADF-H/Gelsolin-like_dom_sf (IPR029006) - T[824-947] 1.0E-34 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SC24C_HUMAN | 28.188 % | 343 | 9.88E-102 |
| SC24B_HUMAN | 49.1 % | 819 | 0 |
| SC24A_HUMAN | 48.73 % | 818 | 0 |