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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  2. Transcript 'KH2012:KH.L172.2.v1....' > 
  3. Transcript 'Boschl.CG.Botznik201...' > 
  4. Transcript 'Boschl.CG.Botznik201...' > 
  5. Transcript 'Boleac.CG.SB_v3.S547...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S547.g11467.01.t

Possible name(s)

VPS26A; VPS26B; VPS26C

Gene model

Boleac.CG.SB_v3.S547.g11467

Location

S547 [88,266 / 92,605]

Sequences

Amino acid sequence

Length: 294

>Boleac.CG.SB_v3.S547.g11467.01.p
MSLDIRLKRLSKTYHEGDTVTGIVIVQSKEPLQHQGILATVEGTVSVSLSSKNAGRFEAM
YNAVKPLNIFSTTIEVAKSGKFSPGRTEILFEFPLKGKGNKPLYETYHGVYINVQYMLRC
SMKRSLLAKDLSKECEILVEYKTGEKATAQPVSFTVTPGSIQNLKDKSQIPRFSVRGKLD
SSECCITKPFTGEIVVEKSDSIIKSIEIQLLRVETIGSAEGYSREATEIQNIEIGYGDVC
HGITIPIYMVFPRLFVCPTLDTTNFKIEFEVNLVVVFADNXLIMEKFPIKLTRF

Nucleotide sequence

Length: 1,671

>Boleac.CG.SB_v3.S547.g11467.01.t
CAATCTCAACCACGTCCTATTCAATGAAACGGGGAGATAGGAGTACTAAGAGAGGTCATG
TCATTGGATATCAGGTTGAAGAGGCTTTCCAAGACATATCATGAAGGAGACACGGTTACT
GGAATTGTTATCGTGCAATCCAAAGAACCTCTTCAGCATCAAGGCATTCTGGCCACTGTC
GAAGGAACAGTGTCTGTGTCTCTAAGCTCAAAAAACGCCGGAAGGTTTGAGGCGATGTAC
AATGCTGTGAAACCACTGAATATATTTTCTACAACTATCGAAGTAGCCAAGAGTGGGAAA
TTCTCGCCAGGAAGAACTGAGATTCTATTTGAATTCCCATTGAAGGGCAAAGGAAATAAG
CCGCTCTATGAGACGTACCATGGTGTATACATCAATGTTCAATACATGTTGCGATGTTCC
ATGAAGAGATCATTACTTGCAAAAGATCTGTCAAAGGAATGTGAGATATTGGTTGAGTAT
AAAACTGGAGAGAAAGCTACAGCACAGCCAGTTTCCTTTACTGTTACACCGGGATCGATA
CAAAACTTGAAAGATAAAAGTCAAATCCCAAGATTTTCAGTTCGAGGGAAATTGGACAGC
TCAGAGTGTTGCATCACAAAGCCATTCACTGGTGAAATTGTTGTTGAAAAATCTGATTCT
ATCATCAAATCAATTGAAATACAATTGCTTAGAGTGGAAACGATAGGNTCGGCAGAGGGT
TACTCCCGTGAAGCCACTGAGATTCAAAACATTGAGATTGGCTATGGAGATGTCTGCCAT
GGAATTACCATTCCTATCTATATGGTGTTTCCTCGACTGTTTGTCTGTCCCACACTTGAC
ACAACCAACTTCAAAATTGAGTTTGAAGTAAACCTAGTCGTGGTGTTTGCAGACAATCAN
TTGATCATGGAGAAATTTCCAATCAAATTAACAAGATTTTGAAGAGTTACATTTAAGCAA
GCNGCTCTCCAGAGATCATATTTTTTATGCTTGTCACATCATTAAGCACCCGATTTATCC
TTATCTGTTCGCAATGTTACACCAANCCAATCAGATTTTGAGTCAGACTGAATAAAGCTG
AGAGTGTCTTGCATGAGATTCCACTTCCCTCACCTGCACTGAATGTTTTGACCCAAGGTG
GGTTTTATAGAACCTGGTTGAAAGTATATTATATTTAGGAATTCTAGATAAACTTTATAT
ATGTGGCACACCCATGTGAATTAACAACTTTCAGTCGACTCCTATCTAAATTTTTTGCCC
AAATGAGCAAATATCAGTTTTCCCAGCCTTGCTTTGTCAAAGTTCATAGAAATAGTTGGC
TTTGAGGTTCTGNTGGCCTGATCAACTTTCACCTGTAAAATCCTCCTAATTCACTTGAAT
GTGAGTCGGTTTGAGTCCTTGTTCAAGTGTTTGTTTCAACCCTTGAGCTCTGAACAAGTC
ACTAGCAGCCGAGTCATTGAAGAATGTTACTNCATTTGGATCATCGTGAGCCAATGAATT
GTGAGAAAGTTACTTGCGGTGGAGATATAAGTGAAGCCTATGAAGAAATGAATCGACTCA
ATACTGTCACCTGATTGACGACTGTATCGATCTGTACGTTCCATTTGGTGGTGACAGGAG
TAGGCCTATTGCCCTACCTCGAATTTGTTACCCGATATTCCATGTGCAATA

InterProScan

PANTHER
Vps26-related (IPR028934) - T[1-293] 1.3E-119
SUPERFAMILY
Ig_E-set (IPR014756) - T[2-139] 3.22E-5
Gene3D
Arrestin_C (IPR014752) - T[3-143] 1.9E-31 - T[173-294] 4.1E-12
Pfam
Vps26-related (IPR028934) - T[11-279] 6.5E-49

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DSCR3_HUMAN 59.044 % 380 7.23E-134